GCA_004302725.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGMANDCGF_8 (original name was: gnl|Prokka|GMANDCGF_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	T3PKS	1	30,839

gnlProkkaGMANDCGF_23 (original name was: gnl|Prokka|GMANDCGF_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	terpene	24,721	45,602

gnlProkkaGMANDCGF_28 (original name was: gnl|Prokka|GMANDCGF_28)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	RiPP-like	28,904	37,813

gnlProkkaGMANDCGF_31 (original name was: gnl|Prokka|GMANDCGF_31)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	cyclic-lactone-autoinducer	1	16,746

Region	Type	From	To	Similarity
Region 8.1	T3PKS	1	30,839
Region 23.1	terpene	24,721	45,602
Region 28.1	RiPP-like	28,904	37,813
Region 31.1	cyclic-lactone-autoinducer	1	16,746

No secondary metabolite regions were found in these records:: gnlProkkaGMANDCGF_1 (original name was: gnl|Prokka|GMANDCGF_1); gnlProkkaGMANDCGF_2 (original name was: gnl|Prokka|GMANDCGF_2); gnlProkkaGMANDCGF_3 (original name was: gnl|Prokka|GMANDCGF_3); gnlProkkaGMANDCGF_4 (original name was: gnl|Prokka|GMANDCGF_4); gnlProkkaGMANDCGF_5 (original name was: gnl|Prokka|GMANDCGF_5); gnlProkkaGMANDCGF_6 (original name was: gnl|Prokka|GMANDCGF_6); gnlProkkaGMANDCGF_7 (original name was: gnl|Prokka|GMANDCGF_7); gnlProkkaGMANDCGF_9 (original name was: gnl|Prokka|GMANDCGF_9); gnlProkkaGMANDCGF_10 (original name was: gnl|Prokka|GMANDCGF_10); gnlProkkaGMANDCGF_11 (original name was: gnl|Prokka|GMANDCGF_11); gnlProkkaGMANDCGF_12 (original name was: gnl|Prokka|GMANDCGF_12); gnlProkkaGMANDCGF_13 (original name was: gnl|Prokka|GMANDCGF_13); gnlProkkaGMANDCGF_14 (original name was: gnl|Prokka|GMANDCGF_14); gnlProkkaGMANDCGF_15 (original name was: gnl|Prokka|GMANDCGF_15); gnlProkkaGMANDCGF_16 (original name was: gnl|Prokka|GMANDCGF_16); gnlProkkaGMANDCGF_17 (original name was: gnl|Prokka|GMANDCGF_17); gnlProkkaGMANDCGF_18 (original name was: gnl|Prokka|GMANDCGF_18); gnlProkkaGMANDCGF_19 (original name was: gnl|Prokka|GMANDCGF_19); gnlProkkaGMANDCGF_20 (original name was: gnl|Prokka|GMANDCGF_20); gnlProkkaGMANDCGF_21 (original name was: gnl|Prokka|GMANDCGF_21); gnlProkkaGMANDCGF_22 (original name was: gnl|Prokka|GMANDCGF_22); gnlProkkaGMANDCGF_24 (original name was: gnl|Prokka|GMANDCGF_24); gnlProkkaGMANDCGF_25 (original name was: gnl|Prokka|GMANDCGF_25); gnlProkkaGMANDCGF_26 (original name was: gnl|Prokka|GMANDCGF_26); gnlProkkaGMANDCGF_27 (original name was: gnl|Prokka|GMANDCGF_27); gnlProkkaGMANDCGF_29 (original name was: gnl|Prokka|GMANDCGF_29); gnlProkkaGMANDCGF_30 (original name was: gnl|Prokka|GMANDCGF_30); gnlProkkaGMANDCGF_32 (original name was: gnl|Prokka|GMANDCGF_32); gnlProkkaGMANDCGF_33 (original name was: gnl|Prokka|GMANDCGF_33); gnlProkkaGMANDCGF_34 (original name was: gnl|Prokka|GMANDCGF_34); gnlProkkaGMANDCGF_35 (original name was: gnl|Prokka|GMANDCGF_35); gnlProkkaGMANDCGF_36 (original name was: gnl|Prokka|GMANDCGF_36); gnlProkkaGMANDCGF_37 (original name was: gnl|Prokka|GMANDCGF_37); gnlProkkaGMANDCGF_38 (original name was: gnl|Prokka|GMANDCGF_38); gnlProkkaGMANDCGF_39 (original name was: gnl|Prokka|GMANDCGF_39); gnlProkkaGMANDCGF_40 (original name was: gnl|Prokka|GMANDCGF_40); gnlProkkaGMANDCGF_41 (original name was: gnl|Prokka|GMANDCGF_41); gnlProkkaGMANDCGF_42 (original name was: gnl|Prokka|GMANDCGF_42); gnlProkkaGMANDCGF_43 (original name was: gnl|Prokka|GMANDCGF_43); gnlProkkaGMANDCGF_44 (original name was: gnl|Prokka|GMANDCGF_44); gnlProkkaGMANDCGF_45 (original name was: gnl|Prokka|GMANDCGF_45); gnlProkkaGMANDCGF_46 (original name was: gnl|Prokka|GMANDCGF_46); gnlProkkaGMANDCGF_47 (original name was: gnl|Prokka|GMANDCGF_47); gnlProkkaGMANDCGF_48 (original name was: gnl|Prokka|GMANDCGF_48); gnlProkkaGMANDCGF_49 (original name was: gnl|Prokka|GMANDCGF_49); gnlProkkaGMANDCGF_50 (original name was: gnl|Prokka|GMANDCGF_50); gnlProkkaGMANDCGF_51 (original name was: gnl|Prokka|GMANDCGF_51); gnlProkkaGMANDCGF_52 (original name was: gnl|Prokka|GMANDCGF_52); gnlProkkaGMANDCGF_53 (original name was: gnl|Prokka|GMANDCGF_53); gnlProkkaGMANDCGF_54 (original name was: gnl|Prokka|GMANDCGF_54); gnlProkkaGMANDCGF_55 (original name was: gnl|Prokka|GMANDCGF_55); gnlProkkaGMANDCGF_56 (original name was: gnl|Prokka|GMANDCGF_56); gnlProkkaGMANDCGF_57 (original name was: gnl|Prokka|GMANDCGF_57); gnlProkkaGMANDCGF_58 (original name was: gnl|Prokka|GMANDCGF_58); gnlProkkaGMANDCGF_59 (original name was: gnl|Prokka|GMANDCGF_59); gnlProkkaGMANDCGF_60 (original name was: gnl|Prokka|GMANDCGF_60); gnlProkkaGMANDCGF_61 (original name was: gnl|Prokka|GMANDCGF_61); gnlProkkaGMANDCGF_62 (original name was: gnl|Prokka|GMANDCGF_62); gnlProkkaGMANDCGF_63 (original name was: gnl|Prokka|GMANDCGF_63); gnlProkkaGMANDCGF_64 (original name was: gnl|Prokka|GMANDCGF_64); gnlProkkaGMANDCGF_65 (original name was: gnl|Prokka|GMANDCGF_65); gnlProkkaGMANDCGF_66 (original name was: gnl|Prokka|GMANDCGF_66); gnlProkkaGMANDCGF_67 (original name was: gnl|Prokka|GMANDCGF_67); gnlProkkaGMANDCGF_68 (original name was: gnl|Prokka|GMANDCGF_68); gnlProkkaGMANDCGF_69 (original name was: gnl|Prokka|GMANDCGF_69); gnlProkkaGMANDCGF_70 (original name was: gnl|Prokka|GMANDCGF_70); gnlProkkaGMANDCGF_71 (original name was: gnl|Prokka|GMANDCGF_71); gnlProkkaGMANDCGF_72 (original name was: gnl|Prokka|GMANDCGF_72); gnlProkkaGMANDCGF_73 (original name was: gnl|Prokka|GMANDCGF_73); gnlProkkaGMANDCGF_74 (original name was: gnl|Prokka|GMANDCGF_74); gnlProkkaGMANDCGF_75 (original name was: gnl|Prokka|GMANDCGF_75); gnlProkkaGMANDCGF_76 (original name was: gnl|Prokka|GMANDCGF_76); gnlProkkaGMANDCGF_77 (original name was: gnl|Prokka|GMANDCGF_77); gnlProkkaGMANDCGF_78 (original name was: gnl|Prokka|GMANDCGF_78); gnlProkkaGMANDCGF_79 (original name was: gnl|Prokka|GMANDCGF_79); gnlProkkaGMANDCGF_80 (original name was: gnl|Prokka|GMANDCGF_80); gnlProkkaGMANDCGF_81 (original name was: gnl|Prokka|GMANDCGF_81); gnlProkkaGMANDCGF_82 (original name was: gnl|Prokka|GMANDCGF_82); gnlProkkaGMANDCGF_83 (original name was: gnl|Prokka|GMANDCGF_83); gnlProkkaGMANDCGF_84 (original name was: gnl|Prokka|GMANDCGF_84); gnlProkkaGMANDCGF_85 (original name was: gnl|Prokka|GMANDCGF_85); gnlProkkaGMANDCGF_86 (original name was: gnl|Prokka|GMANDCGF_86)

Compact view

gnlProkkaGMANDCGF_8 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 1 - 30,839 nt. (total: 30,839 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGMANDCGF_23 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 24,721 - 45,602 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGMANDCGF_28 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 28,904 - 37,813 nt. (total: 8,910 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGMANDCGF_31 - Region 1 - cyclic-lactone-autoinducer

Download region GenBank file

Download region SVG

Location: 1 - 16,746 nt. (total: 16,746 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.