GCA_004403045.2 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGLLMKAKI_8 (original name was: gnl|Prokka|GLLMKAKI_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	terpene	26,246	47,127

gnlProkkaGLLMKAKI_22 (original name was: gnl|Prokka|GLLMKAKI_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RiPP-like	107,244	119,394

gnlProkkaGLLMKAKI_38 (original name was: gnl|Prokka|GLLMKAKI_38)

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	cyclic-lactone-autoinducer	9,360	30,065

gnlProkkaGLLMKAKI_39 (original name was: gnl|Prokka|GLLMKAKI_39)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	T3PKS	1	26,021

Region	Type	From	To	Similarity
Region 8.1	terpene	26,246	47,127
Region 22.1	RiPP-like	107,244	119,394
Region 32.1	cyclic-lactone-autoinducer	9,360	30,065
Region 33.1	T3PKS	1	26,021

No secondary metabolite regions were found in these records:: gnlProkkaGLLMKAKI_1 (original name was: gnl|Prokka|GLLMKAKI_1); gnlProkkaGLLMKAKI_2 (original name was: gnl|Prokka|GLLMKAKI_2); gnlProkkaGLLMKAKI_3 (original name was: gnl|Prokka|GLLMKAKI_3); gnlProkkaGLLMKAKI_4 (original name was: gnl|Prokka|GLLMKAKI_4); gnlProkkaGLLMKAKI_5 (original name was: gnl|Prokka|GLLMKAKI_5); gnlProkkaGLLMKAKI_6 (original name was: gnl|Prokka|GLLMKAKI_6); gnlProkkaGLLMKAKI_7 (original name was: gnl|Prokka|GLLMKAKI_7); gnlProkkaGLLMKAKI_9 (original name was: gnl|Prokka|GLLMKAKI_9); gnlProkkaGLLMKAKI_10 (original name was: gnl|Prokka|GLLMKAKI_10); gnlProkkaGLLMKAKI_11 (original name was: gnl|Prokka|GLLMKAKI_11); gnlProkkaGLLMKAKI_12 (original name was: gnl|Prokka|GLLMKAKI_12); gnlProkkaGLLMKAKI_13 (original name was: gnl|Prokka|GLLMKAKI_13); gnlProkkaGLLMKAKI_14 (original name was: gnl|Prokka|GLLMKAKI_14); gnlProkkaGLLMKAKI_15 (original name was: gnl|Prokka|GLLMKAKI_15); gnlProkkaGLLMKAKI_16 (original name was: gnl|Prokka|GLLMKAKI_16); gnlProkkaGLLMKAKI_17 (original name was: gnl|Prokka|GLLMKAKI_17); gnlProkkaGLLMKAKI_18 (original name was: gnl|Prokka|GLLMKAKI_18); gnlProkkaGLLMKAKI_19 (original name was: gnl|Prokka|GLLMKAKI_19); gnlProkkaGLLMKAKI_20 (original name was: gnl|Prokka|GLLMKAKI_20); gnlProkkaGLLMKAKI_21 (original name was: gnl|Prokka|GLLMKAKI_21); gnlProkkaGLLMKAKI_23 (original name was: gnl|Prokka|GLLMKAKI_23); gnlProkkaGLLMKAKI_24 (original name was: gnl|Prokka|GLLMKAKI_24); gnlProkkaGLLMKAKI_25 (original name was: gnl|Prokka|GLLMKAKI_25); gnlProkkaGLLMKAKI_26 (original name was: gnl|Prokka|GLLMKAKI_26); gnlProkkaGLLMKAKI_27 (original name was: gnl|Prokka|GLLMKAKI_27); gnlProkkaGLLMKAKI_28 (original name was: gnl|Prokka|GLLMKAKI_28); gnlProkkaGLLMKAKI_29 (original name was: gnl|Prokka|GLLMKAKI_29); gnlProkkaGLLMKAKI_30 (original name was: gnl|Prokka|GLLMKAKI_30); gnlProkkaGLLMKAKI_33 (original name was: gnl|Prokka|GLLMKAKI_33); gnlProkkaGLLMKAKI_40 (original name was: gnl|Prokka|GLLMKAKI_40); gnlProkkaGLLMKAKI_41 (original name was: gnl|Prokka|GLLMKAKI_41); gnlProkkaGLLMKAKI_42 (original name was: gnl|Prokka|GLLMKAKI_42); gnlProkkaGLLMKAKI_43 (original name was: gnl|Prokka|GLLMKAKI_43)

Compact view

gnlProkkaGLLMKAKI_8 - Region 1 - terpene

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Location: 26,246 - 47,127 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGLLMKAKI_22 - Region 1 - RiPP-like

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Location: 107,244 - 119,394 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGLLMKAKI_38 - Region 1 - cyclic-lactone-autoinducer

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Location: 9,360 - 30,065 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGLLMKAKI_39 - Region 1 - T3PKS

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Location: 1 - 26,021 nt. (total: 26,021 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.