GCA_004404125.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMEBNLBDF_8 (original name was: gnl|Prokka|MEBNLBDF_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	terpene	26,246	47,127

gnlProkkaMEBNLBDF_22 (original name was: gnl|Prokka|MEBNLBDF_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RiPP-like	107,244	119,394

gnlProkkaMEBNLBDF_44 (original name was: gnl|Prokka|MEBNLBDF_44)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	cyclic-lactone-autoinducer	196,138	216,843

gnlProkkaMEBNLBDF_45 (original name was: gnl|Prokka|MEBNLBDF_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	T3PKS	195,132	220,980

Region	Type	From	To	Similarity
Region 8.1	terpene	26,246	47,127
Region 22.1	RiPP-like	107,244	119,394
Region 30.1	cyclic-lactone-autoinducer	196,138	216,843
Region 31.1	T3PKS	195,132	220,980

No secondary metabolite regions were found in these records:: gnlProkkaMEBNLBDF_1 (original name was: gnl|Prokka|MEBNLBDF_1); gnlProkkaMEBNLBDF_2 (original name was: gnl|Prokka|MEBNLBDF_2); gnlProkkaMEBNLBDF_3 (original name was: gnl|Prokka|MEBNLBDF_3); gnlProkkaMEBNLBDF_4 (original name was: gnl|Prokka|MEBNLBDF_4); gnlProkkaMEBNLBDF_5 (original name was: gnl|Prokka|MEBNLBDF_5); gnlProkkaMEBNLBDF_6 (original name was: gnl|Prokka|MEBNLBDF_6); gnlProkkaMEBNLBDF_7 (original name was: gnl|Prokka|MEBNLBDF_7); gnlProkkaMEBNLBDF_9 (original name was: gnl|Prokka|MEBNLBDF_9); gnlProkkaMEBNLBDF_10 (original name was: gnl|Prokka|MEBNLBDF_10); gnlProkkaMEBNLBDF_11 (original name was: gnl|Prokka|MEBNLBDF_11); gnlProkkaMEBNLBDF_12 (original name was: gnl|Prokka|MEBNLBDF_12); gnlProkkaMEBNLBDF_13 (original name was: gnl|Prokka|MEBNLBDF_13); gnlProkkaMEBNLBDF_14 (original name was: gnl|Prokka|MEBNLBDF_14); gnlProkkaMEBNLBDF_15 (original name was: gnl|Prokka|MEBNLBDF_15); gnlProkkaMEBNLBDF_16 (original name was: gnl|Prokka|MEBNLBDF_16); gnlProkkaMEBNLBDF_17 (original name was: gnl|Prokka|MEBNLBDF_17); gnlProkkaMEBNLBDF_18 (original name was: gnl|Prokka|MEBNLBDF_18); gnlProkkaMEBNLBDF_19 (original name was: gnl|Prokka|MEBNLBDF_19); gnlProkkaMEBNLBDF_20 (original name was: gnl|Prokka|MEBNLBDF_20); gnlProkkaMEBNLBDF_21 (original name was: gnl|Prokka|MEBNLBDF_21); gnlProkkaMEBNLBDF_23 (original name was: gnl|Prokka|MEBNLBDF_23); gnlProkkaMEBNLBDF_24 (original name was: gnl|Prokka|MEBNLBDF_24); gnlProkkaMEBNLBDF_25 (original name was: gnl|Prokka|MEBNLBDF_25); gnlProkkaMEBNLBDF_26 (original name was: gnl|Prokka|MEBNLBDF_26); gnlProkkaMEBNLBDF_27 (original name was: gnl|Prokka|MEBNLBDF_27); gnlProkkaMEBNLBDF_28 (original name was: gnl|Prokka|MEBNLBDF_28); gnlProkkaMEBNLBDF_33 (original name was: gnl|Prokka|MEBNLBDF_33); gnlProkkaMEBNLBDF_46 (original name was: gnl|Prokka|MEBNLBDF_46); gnlProkkaMEBNLBDF_47 (original name was: gnl|Prokka|MEBNLBDF_47); gnlProkkaMEBNLBDF_48 (original name was: gnl|Prokka|MEBNLBDF_48); gnlProkkaMEBNLBDF_49 (original name was: gnl|Prokka|MEBNLBDF_49)

Compact view

gnlProkkaMEBNLBDF_8 - Region 1 - terpene

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Location: 26,246 - 47,127 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMEBNLBDF_22 - Region 1 - RiPP-like

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Location: 107,244 - 119,394 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMEBNLBDF_44 - Region 1 - cyclic-lactone-autoinducer

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Location: 196,138 - 216,843 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMEBNLBDF_45 - Region 1 - T3PKS

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Location: 195,132 - 220,980 nt. (total: 25,849 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.