GCA_004558275.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJFLGNBBN_4 (original name was: gnl|Prokka|JFLGNBBN_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RRE-containing	29,242	49,559

gnlProkkaJFLGNBBN_10 (original name was: gnl|Prokka|JFLGNBBN_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	arylpolyene	3,842	51,521	flexirubin	Other	36%

Region	Type	From	To	Most similar known cluster	Similarity
Region 4.1	RRE-containing	29,242	49,559
Region 10.1	arylpolyene	3,842	51,521	flexirubin	Other	36%

No secondary metabolite regions were found in these records:: gnlProkkaJFLGNBBN_1 (original name was: gnl|Prokka|JFLGNBBN_1); gnlProkkaJFLGNBBN_2 (original name was: gnl|Prokka|JFLGNBBN_2); gnlProkkaJFLGNBBN_3 (original name was: gnl|Prokka|JFLGNBBN_3); gnlProkkaJFLGNBBN_5 (original name was: gnl|Prokka|JFLGNBBN_5); gnlProkkaJFLGNBBN_6 (original name was: gnl|Prokka|JFLGNBBN_6); gnlProkkaJFLGNBBN_7 (original name was: gnl|Prokka|JFLGNBBN_7); gnlProkkaJFLGNBBN_8 (original name was: gnl|Prokka|JFLGNBBN_8); gnlProkkaJFLGNBBN_9 (original name was: gnl|Prokka|JFLGNBBN_9); gnlProkkaJFLGNBBN_11 (original name was: gnl|Prokka|JFLGNBBN_11); gnlProkkaJFLGNBBN_12 (original name was: gnl|Prokka|JFLGNBBN_12); gnlProkkaJFLGNBBN_13 (original name was: gnl|Prokka|JFLGNBBN_13); gnlProkkaJFLGNBBN_14 (original name was: gnl|Prokka|JFLGNBBN_14); gnlProkkaJFLGNBBN_15 (original name was: gnl|Prokka|JFLGNBBN_15); gnlProkkaJFLGNBBN_16 (original name was: gnl|Prokka|JFLGNBBN_16); gnlProkkaJFLGNBBN_17 (original name was: gnl|Prokka|JFLGNBBN_17); gnlProkkaJFLGNBBN_18 (original name was: gnl|Prokka|JFLGNBBN_18); gnlProkkaJFLGNBBN_19 (original name was: gnl|Prokka|JFLGNBBN_19); gnlProkkaJFLGNBBN_20 (original name was: gnl|Prokka|JFLGNBBN_20); gnlProkkaJFLGNBBN_21 (original name was: gnl|Prokka|JFLGNBBN_21); gnlProkkaJFLGNBBN_22 (original name was: gnl|Prokka|JFLGNBBN_22); gnlProkkaJFLGNBBN_23 (original name was: gnl|Prokka|JFLGNBBN_23); gnlProkkaJFLGNBBN_24 (original name was: gnl|Prokka|JFLGNBBN_24); gnlProkkaJFLGNBBN_25 (original name was: gnl|Prokka|JFLGNBBN_25); gnlProkkaJFLGNBBN_26 (original name was: gnl|Prokka|JFLGNBBN_26); gnlProkkaJFLGNBBN_27 (original name was: gnl|Prokka|JFLGNBBN_27); gnlProkkaJFLGNBBN_28 (original name was: gnl|Prokka|JFLGNBBN_28); gnlProkkaJFLGNBBN_29 (original name was: gnl|Prokka|JFLGNBBN_29); gnlProkkaJFLGNBBN_30 (original name was: gnl|Prokka|JFLGNBBN_30); gnlProkkaJFLGNBBN_31 (original name was: gnl|Prokka|JFLGNBBN_31); gnlProkkaJFLGNBBN_32 (original name was: gnl|Prokka|JFLGNBBN_32); gnlProkkaJFLGNBBN_33 (original name was: gnl|Prokka|JFLGNBBN_33); gnlProkkaJFLGNBBN_34 (original name was: gnl|Prokka|JFLGNBBN_34); gnlProkkaJFLGNBBN_35 (original name was: gnl|Prokka|JFLGNBBN_35); gnlProkkaJFLGNBBN_36 (original name was: gnl|Prokka|JFLGNBBN_36); gnlProkkaJFLGNBBN_37 (original name was: gnl|Prokka|JFLGNBBN_37); gnlProkkaJFLGNBBN_38 (original name was: gnl|Prokka|JFLGNBBN_38); gnlProkkaJFLGNBBN_39 (original name was: gnl|Prokka|JFLGNBBN_39); gnlProkkaJFLGNBBN_40 (original name was: gnl|Prokka|JFLGNBBN_40); gnlProkkaJFLGNBBN_41 (original name was: gnl|Prokka|JFLGNBBN_41); gnlProkkaJFLGNBBN_42 (original name was: gnl|Prokka|JFLGNBBN_42); gnlProkkaJFLGNBBN_43 (original name was: gnl|Prokka|JFLGNBBN_43); gnlProkkaJFLGNBBN_44 (original name was: gnl|Prokka|JFLGNBBN_44); gnlProkkaJFLGNBBN_45 (original name was: gnl|Prokka|JFLGNBBN_45); gnlProkkaJFLGNBBN_46 (original name was: gnl|Prokka|JFLGNBBN_46); gnlProkkaJFLGNBBN_47 (original name was: gnl|Prokka|JFLGNBBN_47); gnlProkkaJFLGNBBN_48 (original name was: gnl|Prokka|JFLGNBBN_48); gnlProkkaJFLGNBBN_49 (original name was: gnl|Prokka|JFLGNBBN_49); gnlProkkaJFLGNBBN_50 (original name was: gnl|Prokka|JFLGNBBN_50); gnlProkkaJFLGNBBN_51 (original name was: gnl|Prokka|JFLGNBBN_51); gnlProkkaJFLGNBBN_52 (original name was: gnl|Prokka|JFLGNBBN_52); gnlProkkaJFLGNBBN_53 (original name was: gnl|Prokka|JFLGNBBN_53); gnlProkkaJFLGNBBN_54 (original name was: gnl|Prokka|JFLGNBBN_54)

Compact view

gnlProkkaJFLGNBBN_4 - Region 1 - RRE-containing

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Location: 29,242 - 49,559 nt. (total: 20,318 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJFLGNBBN_10 - Region 1 - arylpolyene

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Location: 3,842 - 51,521 nt. (total: 47,680 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg10_16

AMP-binding (86..308): X

nrpys: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: MAAMIITMGK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)