GCA_005845145.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMCEKDNAD_2 (original name was: gnl|Prokka|MCEKDNAD_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RRE-containing	67,034	87,384

gnlProkkaMCEKDNAD_10 (original name was: gnl|Prokka|MCEKDNAD_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	arylpolyene	66,479	112,356	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	RRE-containing	67,034	87,384
Region 10.1	arylpolyene	66,479	112,356	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaMCEKDNAD_1 (original name was: gnl|Prokka|MCEKDNAD_1); gnlProkkaMCEKDNAD_3 (original name was: gnl|Prokka|MCEKDNAD_3); gnlProkkaMCEKDNAD_4 (original name was: gnl|Prokka|MCEKDNAD_4); gnlProkkaMCEKDNAD_5 (original name was: gnl|Prokka|MCEKDNAD_5); gnlProkkaMCEKDNAD_6 (original name was: gnl|Prokka|MCEKDNAD_6); gnlProkkaMCEKDNAD_7 (original name was: gnl|Prokka|MCEKDNAD_7); gnlProkkaMCEKDNAD_8 (original name was: gnl|Prokka|MCEKDNAD_8); gnlProkkaMCEKDNAD_9 (original name was: gnl|Prokka|MCEKDNAD_9); gnlProkkaMCEKDNAD_11 (original name was: gnl|Prokka|MCEKDNAD_11); gnlProkkaMCEKDNAD_12 (original name was: gnl|Prokka|MCEKDNAD_12); gnlProkkaMCEKDNAD_13 (original name was: gnl|Prokka|MCEKDNAD_13); gnlProkkaMCEKDNAD_14 (original name was: gnl|Prokka|MCEKDNAD_14); gnlProkkaMCEKDNAD_15 (original name was: gnl|Prokka|MCEKDNAD_15); gnlProkkaMCEKDNAD_16 (original name was: gnl|Prokka|MCEKDNAD_16); gnlProkkaMCEKDNAD_17 (original name was: gnl|Prokka|MCEKDNAD_17); gnlProkkaMCEKDNAD_18 (original name was: gnl|Prokka|MCEKDNAD_18); gnlProkkaMCEKDNAD_19 (original name was: gnl|Prokka|MCEKDNAD_19); gnlProkkaMCEKDNAD_20 (original name was: gnl|Prokka|MCEKDNAD_20); gnlProkkaMCEKDNAD_21 (original name was: gnl|Prokka|MCEKDNAD_21); gnlProkkaMCEKDNAD_22 (original name was: gnl|Prokka|MCEKDNAD_22); gnlProkkaMCEKDNAD_23 (original name was: gnl|Prokka|MCEKDNAD_23); gnlProkkaMCEKDNAD_24 (original name was: gnl|Prokka|MCEKDNAD_24); gnlProkkaMCEKDNAD_25 (original name was: gnl|Prokka|MCEKDNAD_25); gnlProkkaMCEKDNAD_26 (original name was: gnl|Prokka|MCEKDNAD_26); gnlProkkaMCEKDNAD_27 (original name was: gnl|Prokka|MCEKDNAD_27); gnlProkkaMCEKDNAD_28 (original name was: gnl|Prokka|MCEKDNAD_28); gnlProkkaMCEKDNAD_29 (original name was: gnl|Prokka|MCEKDNAD_29); gnlProkkaMCEKDNAD_30 (original name was: gnl|Prokka|MCEKDNAD_30); gnlProkkaMCEKDNAD_31 (original name was: gnl|Prokka|MCEKDNAD_31); gnlProkkaMCEKDNAD_32 (original name was: gnl|Prokka|MCEKDNAD_32); gnlProkkaMCEKDNAD_33 (original name was: gnl|Prokka|MCEKDNAD_33); gnlProkkaMCEKDNAD_34 (original name was: gnl|Prokka|MCEKDNAD_34); gnlProkkaMCEKDNAD_35 (original name was: gnl|Prokka|MCEKDNAD_35); gnlProkkaMCEKDNAD_36 (original name was: gnl|Prokka|MCEKDNAD_36); gnlProkkaMCEKDNAD_37 (original name was: gnl|Prokka|MCEKDNAD_37); gnlProkkaMCEKDNAD_38 (original name was: gnl|Prokka|MCEKDNAD_38); gnlProkkaMCEKDNAD_39 (original name was: gnl|Prokka|MCEKDNAD_39); gnlProkkaMCEKDNAD_40 (original name was: gnl|Prokka|MCEKDNAD_40); gnlProkkaMCEKDNAD_41 (original name was: gnl|Prokka|MCEKDNAD_41); gnlProkkaMCEKDNAD_42 (original name was: gnl|Prokka|MCEKDNAD_42); gnlProkkaMCEKDNAD_43 (original name was: gnl|Prokka|MCEKDNAD_43); gnlProkkaMCEKDNAD_44 (original name was: gnl|Prokka|MCEKDNAD_44); gnlProkkaMCEKDNAD_45 (original name was: gnl|Prokka|MCEKDNAD_45); gnlProkkaMCEKDNAD_46 (original name was: gnl|Prokka|MCEKDNAD_46); gnlProkkaMCEKDNAD_47 (original name was: gnl|Prokka|MCEKDNAD_47); gnlProkkaMCEKDNAD_48 (original name was: gnl|Prokka|MCEKDNAD_48); gnlProkkaMCEKDNAD_49 (original name was: gnl|Prokka|MCEKDNAD_49); gnlProkkaMCEKDNAD_50 (original name was: gnl|Prokka|MCEKDNAD_50); gnlProkkaMCEKDNAD_51 (original name was: gnl|Prokka|MCEKDNAD_51); gnlProkkaMCEKDNAD_52 (original name was: gnl|Prokka|MCEKDNAD_52); gnlProkkaMCEKDNAD_53 (original name was: gnl|Prokka|MCEKDNAD_53); gnlProkkaMCEKDNAD_54 (original name was: gnl|Prokka|MCEKDNAD_54); gnlProkkaMCEKDNAD_55 (original name was: gnl|Prokka|MCEKDNAD_55); gnlProkkaMCEKDNAD_56 (original name was: gnl|Prokka|MCEKDNAD_56); gnlProkkaMCEKDNAD_57 (original name was: gnl|Prokka|MCEKDNAD_57); gnlProkkaMCEKDNAD_58 (original name was: gnl|Prokka|MCEKDNAD_58); gnlProkkaMCEKDNAD_59 (original name was: gnl|Prokka|MCEKDNAD_59); gnlProkkaMCEKDNAD_60 (original name was: gnl|Prokka|MCEKDNAD_60); gnlProkkaMCEKDNAD_61 (original name was: gnl|Prokka|MCEKDNAD_61); gnlProkkaMCEKDNAD_62 (original name was: gnl|Prokka|MCEKDNAD_62); gnlProkkaMCEKDNAD_63 (original name was: gnl|Prokka|MCEKDNAD_63); gnlProkkaMCEKDNAD_64 (original name was: gnl|Prokka|MCEKDNAD_64); gnlProkkaMCEKDNAD_65 (original name was: gnl|Prokka|MCEKDNAD_65); gnlProkkaMCEKDNAD_66 (original name was: gnl|Prokka|MCEKDNAD_66); gnlProkkaMCEKDNAD_67 (original name was: gnl|Prokka|MCEKDNAD_67); gnlProkkaMCEKDNAD_68 (original name was: gnl|Prokka|MCEKDNAD_68); gnlProkkaMCEKDNAD_69 (original name was: gnl|Prokka|MCEKDNAD_69); gnlProkkaMCEKDNAD_70 (original name was: gnl|Prokka|MCEKDNAD_70); gnlProkkaMCEKDNAD_71 (original name was: gnl|Prokka|MCEKDNAD_71)

Compact view

gnlProkkaMCEKDNAD_2 - Region 1 - RRE-containing

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Location: 67,034 - 87,384 nt. (total: 20,351 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMCEKDNAD_10 - Region 1 - arylpolyene

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Location: 66,479 - 112,356 nt. (total: 45,878 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg10_69

AMP-binding (46..335): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)