GCA_005864245.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFHCEKDND_2 (original name was: gnl|Prokka|FHCEKDND_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	91,069	108,881

gnlProkkaFHCEKDND_4 (original name was: gnl|Prokka|FHCEKDND_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	T3PKS	13,801	54,973

gnlProkkaFHCEKDND_5 (original name was: gnl|Prokka|FHCEKDND_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	lanthipeptide-class-iv	122,380	145,007

Region	Type	From	To	Similarity
Region 2.1	RiPP-like	91,069	108,881
Region 4.1	T3PKS	13,801	54,973
Region 5.1	lanthipeptide-class-iv	122,380	145,007

No secondary metabolite regions were found in these records:: gnlProkkaFHCEKDND_1 (original name was: gnl|Prokka|FHCEKDND_1); gnlProkkaFHCEKDND_3 (original name was: gnl|Prokka|FHCEKDND_3); gnlProkkaFHCEKDND_6 (original name was: gnl|Prokka|FHCEKDND_6); gnlProkkaFHCEKDND_7 (original name was: gnl|Prokka|FHCEKDND_7); gnlProkkaFHCEKDND_8 (original name was: gnl|Prokka|FHCEKDND_8); gnlProkkaFHCEKDND_9 (original name was: gnl|Prokka|FHCEKDND_9); gnlProkkaFHCEKDND_10 (original name was: gnl|Prokka|FHCEKDND_10); gnlProkkaFHCEKDND_11 (original name was: gnl|Prokka|FHCEKDND_11); gnlProkkaFHCEKDND_12 (original name was: gnl|Prokka|FHCEKDND_12); gnlProkkaFHCEKDND_13 (original name was: gnl|Prokka|FHCEKDND_13); gnlProkkaFHCEKDND_14 (original name was: gnl|Prokka|FHCEKDND_14); gnlProkkaFHCEKDND_15 (original name was: gnl|Prokka|FHCEKDND_15); gnlProkkaFHCEKDND_16 (original name was: gnl|Prokka|FHCEKDND_16); gnlProkkaFHCEKDND_17 (original name was: gnl|Prokka|FHCEKDND_17); gnlProkkaFHCEKDND_18 (original name was: gnl|Prokka|FHCEKDND_18); gnlProkkaFHCEKDND_19 (original name was: gnl|Prokka|FHCEKDND_19); gnlProkkaFHCEKDND_20 (original name was: gnl|Prokka|FHCEKDND_20); gnlProkkaFHCEKDND_21 (original name was: gnl|Prokka|FHCEKDND_21); gnlProkkaFHCEKDND_22 (original name was: gnl|Prokka|FHCEKDND_22); gnlProkkaFHCEKDND_23 (original name was: gnl|Prokka|FHCEKDND_23); gnlProkkaFHCEKDND_24 (original name was: gnl|Prokka|FHCEKDND_24); gnlProkkaFHCEKDND_25 (original name was: gnl|Prokka|FHCEKDND_25); gnlProkkaFHCEKDND_26 (original name was: gnl|Prokka|FHCEKDND_26); gnlProkkaFHCEKDND_27 (original name was: gnl|Prokka|FHCEKDND_27); gnlProkkaFHCEKDND_28 (original name was: gnl|Prokka|FHCEKDND_28); gnlProkkaFHCEKDND_29 (original name was: gnl|Prokka|FHCEKDND_29); gnlProkkaFHCEKDND_30 (original name was: gnl|Prokka|FHCEKDND_30); gnlProkkaFHCEKDND_31 (original name was: gnl|Prokka|FHCEKDND_31); gnlProkkaFHCEKDND_32 (original name was: gnl|Prokka|FHCEKDND_32); gnlProkkaFHCEKDND_33 (original name was: gnl|Prokka|FHCEKDND_33); gnlProkkaFHCEKDND_34 (original name was: gnl|Prokka|FHCEKDND_34); gnlProkkaFHCEKDND_35 (original name was: gnl|Prokka|FHCEKDND_35); gnlProkkaFHCEKDND_36 (original name was: gnl|Prokka|FHCEKDND_36); gnlProkkaFHCEKDND_37 (original name was: gnl|Prokka|FHCEKDND_37); gnlProkkaFHCEKDND_38 (original name was: gnl|Prokka|FHCEKDND_38); gnlProkkaFHCEKDND_39 (original name was: gnl|Prokka|FHCEKDND_39); gnlProkkaFHCEKDND_40 (original name was: gnl|Prokka|FHCEKDND_40)

Compact view

gnlProkkaFHCEKDND_2 - Region 1 - RiPP-like

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Location: 91,069 - 108,881 nt. (total: 17,813 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFHCEKDND_4 - Region 1 - T3PKS

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Location: 13,801 - 54,973 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFHCEKDND_5 - Region 1 - lanthipeptide-class-iv

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Location: 122,380 - 145,007 nt. (total: 22,628 nt) Show pHMM detection rules used

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.