GCA_006539405.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMANLCNHB_3 (original name was: gnl|Prokka|MANLCNHB_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	lanthipeptide-class-iv	45,765	65,693

gnlProkkaMANLCNHB_5 (original name was: gnl|Prokka|MANLCNHB_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RiPP-like	2,606	13,571

gnlProkkaMANLCNHB_15 (original name was: gnl|Prokka|MANLCNHB_15)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	lanthipeptide-class-iii	1	15,175

Region	Type	From	To	Similarity
Region 3.1	lanthipeptide-class-iv	45,765	65,693
Region 5.1	RiPP-like	2,606	13,571
Region 15.1	lanthipeptide-class-iii	1	15,175

No secondary metabolite regions were found in these records:: gnlProkkaMANLCNHB_1 (original name was: gnl|Prokka|MANLCNHB_1); gnlProkkaMANLCNHB_2 (original name was: gnl|Prokka|MANLCNHB_2); gnlProkkaMANLCNHB_4 (original name was: gnl|Prokka|MANLCNHB_4); gnlProkkaMANLCNHB_6 (original name was: gnl|Prokka|MANLCNHB_6); gnlProkkaMANLCNHB_7 (original name was: gnl|Prokka|MANLCNHB_7); gnlProkkaMANLCNHB_8 (original name was: gnl|Prokka|MANLCNHB_8); gnlProkkaMANLCNHB_9 (original name was: gnl|Prokka|MANLCNHB_9); gnlProkkaMANLCNHB_10 (original name was: gnl|Prokka|MANLCNHB_10); gnlProkkaMANLCNHB_11 (original name was: gnl|Prokka|MANLCNHB_11); gnlProkkaMANLCNHB_12 (original name was: gnl|Prokka|MANLCNHB_12); gnlProkkaMANLCNHB_13 (original name was: gnl|Prokka|MANLCNHB_13); gnlProkkaMANLCNHB_14 (original name was: gnl|Prokka|MANLCNHB_14); gnlProkkaMANLCNHB_16 (original name was: gnl|Prokka|MANLCNHB_16); gnlProkkaMANLCNHB_17 (original name was: gnl|Prokka|MANLCNHB_17); gnlProkkaMANLCNHB_18 (original name was: gnl|Prokka|MANLCNHB_18); gnlProkkaMANLCNHB_19 (original name was: gnl|Prokka|MANLCNHB_19); gnlProkkaMANLCNHB_20 (original name was: gnl|Prokka|MANLCNHB_20); gnlProkkaMANLCNHB_21 (original name was: gnl|Prokka|MANLCNHB_21); gnlProkkaMANLCNHB_22 (original name was: gnl|Prokka|MANLCNHB_22); gnlProkkaMANLCNHB_23 (original name was: gnl|Prokka|MANLCNHB_23); gnlProkkaMANLCNHB_24 (original name was: gnl|Prokka|MANLCNHB_24); gnlProkkaMANLCNHB_25 (original name was: gnl|Prokka|MANLCNHB_25); gnlProkkaMANLCNHB_26 (original name was: gnl|Prokka|MANLCNHB_26); gnlProkkaMANLCNHB_27 (original name was: gnl|Prokka|MANLCNHB_27); gnlProkkaMANLCNHB_28 (original name was: gnl|Prokka|MANLCNHB_28); gnlProkkaMANLCNHB_29 (original name was: gnl|Prokka|MANLCNHB_29); gnlProkkaMANLCNHB_30 (original name was: gnl|Prokka|MANLCNHB_30); gnlProkkaMANLCNHB_31 (original name was: gnl|Prokka|MANLCNHB_31); gnlProkkaMANLCNHB_32 (original name was: gnl|Prokka|MANLCNHB_32); gnlProkkaMANLCNHB_33 (original name was: gnl|Prokka|MANLCNHB_33); gnlProkkaMANLCNHB_34 (original name was: gnl|Prokka|MANLCNHB_34); gnlProkkaMANLCNHB_35 (original name was: gnl|Prokka|MANLCNHB_35); gnlProkkaMANLCNHB_36 (original name was: gnl|Prokka|MANLCNHB_36); gnlProkkaMANLCNHB_37 (original name was: gnl|Prokka|MANLCNHB_37); gnlProkkaMANLCNHB_38 (original name was: gnl|Prokka|MANLCNHB_38); gnlProkkaMANLCNHB_39 (original name was: gnl|Prokka|MANLCNHB_39); gnlProkkaMANLCNHB_40 (original name was: gnl|Prokka|MANLCNHB_40); gnlProkkaMANLCNHB_41 (original name was: gnl|Prokka|MANLCNHB_41); gnlProkkaMANLCNHB_42 (original name was: gnl|Prokka|MANLCNHB_42); gnlProkkaMANLCNHB_43 (original name was: gnl|Prokka|MANLCNHB_43); gnlProkkaMANLCNHB_44 (original name was: gnl|Prokka|MANLCNHB_44); gnlProkkaMANLCNHB_45 (original name was: gnl|Prokka|MANLCNHB_45); gnlProkkaMANLCNHB_46 (original name was: gnl|Prokka|MANLCNHB_46); gnlProkkaMANLCNHB_47 (original name was: gnl|Prokka|MANLCNHB_47); gnlProkkaMANLCNHB_48 (original name was: gnl|Prokka|MANLCNHB_48); gnlProkkaMANLCNHB_49 (original name was: gnl|Prokka|MANLCNHB_49); gnlProkkaMANLCNHB_50 (original name was: gnl|Prokka|MANLCNHB_50); gnlProkkaMANLCNHB_51 (original name was: gnl|Prokka|MANLCNHB_51); gnlProkkaMANLCNHB_52 (original name was: gnl|Prokka|MANLCNHB_52); gnlProkkaMANLCNHB_53 (original name was: gnl|Prokka|MANLCNHB_53); gnlProkkaMANLCNHB_54 (original name was: gnl|Prokka|MANLCNHB_54); gnlProkkaMANLCNHB_55 (original name was: gnl|Prokka|MANLCNHB_55); gnlProkkaMANLCNHB_56 (original name was: gnl|Prokka|MANLCNHB_56); gnlProkkaMANLCNHB_57 (original name was: gnl|Prokka|MANLCNHB_57); gnlProkkaMANLCNHB_58 (original name was: gnl|Prokka|MANLCNHB_58); gnlProkkaMANLCNHB_59 (original name was: gnl|Prokka|MANLCNHB_59); gnlProkkaMANLCNHB_60 (original name was: gnl|Prokka|MANLCNHB_60); gnlProkkaMANLCNHB_61 (original name was: gnl|Prokka|MANLCNHB_61); gnlProkkaMANLCNHB_62 (original name was: gnl|Prokka|MANLCNHB_62); gnlProkkaMANLCNHB_63 (original name was: gnl|Prokka|MANLCNHB_63); gnlProkkaMANLCNHB_64 (original name was: gnl|Prokka|MANLCNHB_64); gnlProkkaMANLCNHB_65 (original name was: gnl|Prokka|MANLCNHB_65); gnlProkkaMANLCNHB_66 (original name was: gnl|Prokka|MANLCNHB_66); gnlProkkaMANLCNHB_67 (original name was: gnl|Prokka|MANLCNHB_67); gnlProkkaMANLCNHB_68 (original name was: gnl|Prokka|MANLCNHB_68); gnlProkkaMANLCNHB_69 (original name was: gnl|Prokka|MANLCNHB_69); gnlProkkaMANLCNHB_70 (original name was: gnl|Prokka|MANLCNHB_70); gnlProkkaMANLCNHB_71 (original name was: gnl|Prokka|MANLCNHB_71); gnlProkkaMANLCNHB_72 (original name was: gnl|Prokka|MANLCNHB_72); gnlProkkaMANLCNHB_73 (original name was: gnl|Prokka|MANLCNHB_73); gnlProkkaMANLCNHB_74 (original name was: gnl|Prokka|MANLCNHB_74); gnlProkkaMANLCNHB_75 (original name was: gnl|Prokka|MANLCNHB_75); gnlProkkaMANLCNHB_76 (original name was: gnl|Prokka|MANLCNHB_76); gnlProkkaMANLCNHB_77 (original name was: gnl|Prokka|MANLCNHB_77); gnlProkkaMANLCNHB_78 (original name was: gnl|Prokka|MANLCNHB_78); gnlProkkaMANLCNHB_79 (original name was: gnl|Prokka|MANLCNHB_79); gnlProkkaMANLCNHB_80 (original name was: gnl|Prokka|MANLCNHB_80)

Compact view

gnlProkkaMANLCNHB_3 - Region 1 - lanthipeptide-class-iv

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Location: 45,765 - 65,693 nt. (total: 19,929 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaMANLCNHB_5 - Region 1 - RiPP-like

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Location: 2,606 - 13,571 nt. (total: 10,966 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMANLCNHB_15 - Region 1 - lanthipeptide-class-iii

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Location: 1 - 15,175 nt. (total: 15,175 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iii: (micKC and not PKS_KS)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.