GCA_008571855.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPKJILPNL_7 (original name was: gnl|Prokka|PKJILPNL_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	resorcinol	58,436	99,575

gnlProkkaPKJILPNL_11 (original name was: gnl|Prokka|PKJILPNL_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RRE-containing	380,902	401,689

gnlProkkaPKJILPNL_55 (original name was: gnl|Prokka|PKJILPNL_55)

Region	Type	From	To	Most similar known cluster		Similarity
Region 55.1	arylpolyene	1	31,754	flexirubin	Other	36%
Region 55.2	RiPP-like	228,912	238,796

Region	Type	From	To	Most similar known cluster	Similarity
Region 7.1	resorcinol	58,436	99,575
Region 11.1	RRE-containing	380,902	401,689
Region 55.1	arylpolyene	1	31,754	flexirubin	Other	36%
Region 55.2	RiPP-like	228,912	238,796

No secondary metabolite regions were found in these records:: gnlProkkaPKJILPNL_1 (original name was: gnl|Prokka|PKJILPNL_1); gnlProkkaPKJILPNL_2 (original name was: gnl|Prokka|PKJILPNL_2); gnlProkkaPKJILPNL_3 (original name was: gnl|Prokka|PKJILPNL_3); gnlProkkaPKJILPNL_4 (original name was: gnl|Prokka|PKJILPNL_4); gnlProkkaPKJILPNL_5 (original name was: gnl|Prokka|PKJILPNL_5); gnlProkkaPKJILPNL_6 (original name was: gnl|Prokka|PKJILPNL_6); gnlProkkaPKJILPNL_8 (original name was: gnl|Prokka|PKJILPNL_8); gnlProkkaPKJILPNL_9 (original name was: gnl|Prokka|PKJILPNL_9); gnlProkkaPKJILPNL_10 (original name was: gnl|Prokka|PKJILPNL_10); gnlProkkaPKJILPNL_12 (original name was: gnl|Prokka|PKJILPNL_12); gnlProkkaPKJILPNL_13 (original name was: gnl|Prokka|PKJILPNL_13); gnlProkkaPKJILPNL_14 (original name was: gnl|Prokka|PKJILPNL_14); gnlProkkaPKJILPNL_15 (original name was: gnl|Prokka|PKJILPNL_15); gnlProkkaPKJILPNL_16 (original name was: gnl|Prokka|PKJILPNL_16); gnlProkkaPKJILPNL_17 (original name was: gnl|Prokka|PKJILPNL_17); gnlProkkaPKJILPNL_18 (original name was: gnl|Prokka|PKJILPNL_18); gnlProkkaPKJILPNL_19 (original name was: gnl|Prokka|PKJILPNL_19); gnlProkkaPKJILPNL_20 (original name was: gnl|Prokka|PKJILPNL_20); gnlProkkaPKJILPNL_21 (original name was: gnl|Prokka|PKJILPNL_21); gnlProkkaPKJILPNL_22 (original name was: gnl|Prokka|PKJILPNL_22); gnlProkkaPKJILPNL_23 (original name was: gnl|Prokka|PKJILPNL_23); gnlProkkaPKJILPNL_24 (original name was: gnl|Prokka|PKJILPNL_24); gnlProkkaPKJILPNL_25 (original name was: gnl|Prokka|PKJILPNL_25); gnlProkkaPKJILPNL_26 (original name was: gnl|Prokka|PKJILPNL_26); gnlProkkaPKJILPNL_27 (original name was: gnl|Prokka|PKJILPNL_27); gnlProkkaPKJILPNL_28 (original name was: gnl|Prokka|PKJILPNL_28); gnlProkkaPKJILPNL_29 (original name was: gnl|Prokka|PKJILPNL_29); gnlProkkaPKJILPNL_30 (original name was: gnl|Prokka|PKJILPNL_30); gnlProkkaPKJILPNL_31 (original name was: gnl|Prokka|PKJILPNL_31); gnlProkkaPKJILPNL_32 (original name was: gnl|Prokka|PKJILPNL_32); gnlProkkaPKJILPNL_33 (original name was: gnl|Prokka|PKJILPNL_33); gnlProkkaPKJILPNL_34 (original name was: gnl|Prokka|PKJILPNL_34); gnlProkkaPKJILPNL_35 (original name was: gnl|Prokka|PKJILPNL_35); gnlProkkaPKJILPNL_36 (original name was: gnl|Prokka|PKJILPNL_36); gnlProkkaPKJILPNL_37 (original name was: gnl|Prokka|PKJILPNL_37); gnlProkkaPKJILPNL_38 (original name was: gnl|Prokka|PKJILPNL_38); gnlProkkaPKJILPNL_39 (original name was: gnl|Prokka|PKJILPNL_39); gnlProkkaPKJILPNL_40 (original name was: gnl|Prokka|PKJILPNL_40); gnlProkkaPKJILPNL_41 (original name was: gnl|Prokka|PKJILPNL_41); gnlProkkaPKJILPNL_42 (original name was: gnl|Prokka|PKJILPNL_42); gnlProkkaPKJILPNL_43 (original name was: gnl|Prokka|PKJILPNL_43); gnlProkkaPKJILPNL_44 (original name was: gnl|Prokka|PKJILPNL_44); gnlProkkaPKJILPNL_45 (original name was: gnl|Prokka|PKJILPNL_45); gnlProkkaPKJILPNL_46 (original name was: gnl|Prokka|PKJILPNL_46); gnlProkkaPKJILPNL_47 (original name was: gnl|Prokka|PKJILPNL_47); gnlProkkaPKJILPNL_48 (original name was: gnl|Prokka|PKJILPNL_48); gnlProkkaPKJILPNL_49 (original name was: gnl|Prokka|PKJILPNL_49); gnlProkkaPKJILPNL_50 (original name was: gnl|Prokka|PKJILPNL_50); gnlProkkaPKJILPNL_51 (original name was: gnl|Prokka|PKJILPNL_51); gnlProkkaPKJILPNL_52 (original name was: gnl|Prokka|PKJILPNL_52); gnlProkkaPKJILPNL_53 (original name was: gnl|Prokka|PKJILPNL_53); gnlProkkaPKJILPNL_54 (original name was: gnl|Prokka|PKJILPNL_54); gnlProkkaPKJILPNL_56 (original name was: gnl|Prokka|PKJILPNL_56); gnlProkkaPKJILPNL_57 (original name was: gnl|Prokka|PKJILPNL_57); gnlProkkaPKJILPNL_58 (original name was: gnl|Prokka|PKJILPNL_58); gnlProkkaPKJILPNL_59 (original name was: gnl|Prokka|PKJILPNL_59); gnlProkkaPKJILPNL_60 (original name was: gnl|Prokka|PKJILPNL_60); gnlProkkaPKJILPNL_61 (original name was: gnl|Prokka|PKJILPNL_61); gnlProkkaPKJILPNL_62 (original name was: gnl|Prokka|PKJILPNL_62); gnlProkkaPKJILPNL_63 (original name was: gnl|Prokka|PKJILPNL_63); gnlProkkaPKJILPNL_64 (original name was: gnl|Prokka|PKJILPNL_64); gnlProkkaPKJILPNL_65 (original name was: gnl|Prokka|PKJILPNL_65)

Compact view

gnlProkkaPKJILPNL_7 - Region 1 - resorcinol

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Location: 58,436 - 99,575 nt. (total: 41,140 nt) Show pHMM detection rules used

resorcinol: DarB

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core biosynthetic genes

additional biosynthetic genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPKJILPNL_11 - Region 1 - RRE-containing

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Location: 380,902 - 401,689 nt. (total: 20,788 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPKJILPNL_55 - Region 1 - arylpolyene

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Location: 1 - 31,754 nt. (total: 31,754 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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resistance

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NRPS/PKS domains

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Similar known gene clusters from MIBiG 3.1

gnlProkkaPKJILPNL_55 - Region 2 - RiPP-like

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Location: 228,912 - 238,796 nt. (total: 9,885 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.