GCA_008571875.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKFBDJDML_3 (original name was: gnl|Prokka|KFBDJDML_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RRE-containing	193,233	214,020

gnlProkkaKFBDJDML_41 (original name was: gnl|Prokka|KFBDJDML_41)

Region	Type	From	To	Most similar known cluster		Similarity
Region 41.1	RiPP-like	1	9,885

gnlProkkaKFBDJDML_64 (original name was: gnl|Prokka|KFBDJDML_64)

Region	Type	From	To	Most similar known cluster		Similarity
Region 64.1	arylpolyene	109,148	140,870	flexirubin	Other	36%

Region	Type	From	To	Most similar known cluster	Similarity
Region 3.1	RRE-containing	193,233	214,020
Region 41.1	RiPP-like	1	9,885
Region 64.1	arylpolyene	109,148	140,870	flexirubin	Other	36%

No secondary metabolite regions were found in these records:: gnlProkkaKFBDJDML_1 (original name was: gnl|Prokka|KFBDJDML_1); gnlProkkaKFBDJDML_2 (original name was: gnl|Prokka|KFBDJDML_2); gnlProkkaKFBDJDML_4 (original name was: gnl|Prokka|KFBDJDML_4); gnlProkkaKFBDJDML_5 (original name was: gnl|Prokka|KFBDJDML_5); gnlProkkaKFBDJDML_6 (original name was: gnl|Prokka|KFBDJDML_6); gnlProkkaKFBDJDML_7 (original name was: gnl|Prokka|KFBDJDML_7); gnlProkkaKFBDJDML_8 (original name was: gnl|Prokka|KFBDJDML_8); gnlProkkaKFBDJDML_9 (original name was: gnl|Prokka|KFBDJDML_9); gnlProkkaKFBDJDML_10 (original name was: gnl|Prokka|KFBDJDML_10); gnlProkkaKFBDJDML_11 (original name was: gnl|Prokka|KFBDJDML_11); gnlProkkaKFBDJDML_12 (original name was: gnl|Prokka|KFBDJDML_12); gnlProkkaKFBDJDML_13 (original name was: gnl|Prokka|KFBDJDML_13); gnlProkkaKFBDJDML_14 (original name was: gnl|Prokka|KFBDJDML_14); gnlProkkaKFBDJDML_15 (original name was: gnl|Prokka|KFBDJDML_15); gnlProkkaKFBDJDML_16 (original name was: gnl|Prokka|KFBDJDML_16); gnlProkkaKFBDJDML_17 (original name was: gnl|Prokka|KFBDJDML_17); gnlProkkaKFBDJDML_18 (original name was: gnl|Prokka|KFBDJDML_18); gnlProkkaKFBDJDML_19 (original name was: gnl|Prokka|KFBDJDML_19); gnlProkkaKFBDJDML_20 (original name was: gnl|Prokka|KFBDJDML_20); gnlProkkaKFBDJDML_21 (original name was: gnl|Prokka|KFBDJDML_21); gnlProkkaKFBDJDML_22 (original name was: gnl|Prokka|KFBDJDML_22); gnlProkkaKFBDJDML_23 (original name was: gnl|Prokka|KFBDJDML_23); gnlProkkaKFBDJDML_24 (original name was: gnl|Prokka|KFBDJDML_24); gnlProkkaKFBDJDML_25 (original name was: gnl|Prokka|KFBDJDML_25); gnlProkkaKFBDJDML_26 (original name was: gnl|Prokka|KFBDJDML_26); gnlProkkaKFBDJDML_27 (original name was: gnl|Prokka|KFBDJDML_27); gnlProkkaKFBDJDML_28 (original name was: gnl|Prokka|KFBDJDML_28); gnlProkkaKFBDJDML_29 (original name was: gnl|Prokka|KFBDJDML_29); gnlProkkaKFBDJDML_30 (original name was: gnl|Prokka|KFBDJDML_30); gnlProkkaKFBDJDML_31 (original name was: gnl|Prokka|KFBDJDML_31); gnlProkkaKFBDJDML_32 (original name was: gnl|Prokka|KFBDJDML_32); gnlProkkaKFBDJDML_33 (original name was: gnl|Prokka|KFBDJDML_33); gnlProkkaKFBDJDML_34 (original name was: gnl|Prokka|KFBDJDML_34); gnlProkkaKFBDJDML_35 (original name was: gnl|Prokka|KFBDJDML_35); gnlProkkaKFBDJDML_36 (original name was: gnl|Prokka|KFBDJDML_36); gnlProkkaKFBDJDML_37 (original name was: gnl|Prokka|KFBDJDML_37); gnlProkkaKFBDJDML_38 (original name was: gnl|Prokka|KFBDJDML_38); gnlProkkaKFBDJDML_39 (original name was: gnl|Prokka|KFBDJDML_39); gnlProkkaKFBDJDML_40 (original name was: gnl|Prokka|KFBDJDML_40); gnlProkkaKFBDJDML_42 (original name was: gnl|Prokka|KFBDJDML_42); gnlProkkaKFBDJDML_43 (original name was: gnl|Prokka|KFBDJDML_43); gnlProkkaKFBDJDML_44 (original name was: gnl|Prokka|KFBDJDML_44); gnlProkkaKFBDJDML_45 (original name was: gnl|Prokka|KFBDJDML_45); gnlProkkaKFBDJDML_46 (original name was: gnl|Prokka|KFBDJDML_46); gnlProkkaKFBDJDML_47 (original name was: gnl|Prokka|KFBDJDML_47); gnlProkkaKFBDJDML_48 (original name was: gnl|Prokka|KFBDJDML_48); gnlProkkaKFBDJDML_49 (original name was: gnl|Prokka|KFBDJDML_49); gnlProkkaKFBDJDML_50 (original name was: gnl|Prokka|KFBDJDML_50); gnlProkkaKFBDJDML_51 (original name was: gnl|Prokka|KFBDJDML_51); gnlProkkaKFBDJDML_52 (original name was: gnl|Prokka|KFBDJDML_52); gnlProkkaKFBDJDML_53 (original name was: gnl|Prokka|KFBDJDML_53); gnlProkkaKFBDJDML_54 (original name was: gnl|Prokka|KFBDJDML_54); gnlProkkaKFBDJDML_55 (original name was: gnl|Prokka|KFBDJDML_55); gnlProkkaKFBDJDML_56 (original name was: gnl|Prokka|KFBDJDML_56); gnlProkkaKFBDJDML_57 (original name was: gnl|Prokka|KFBDJDML_57); gnlProkkaKFBDJDML_58 (original name was: gnl|Prokka|KFBDJDML_58); gnlProkkaKFBDJDML_59 (original name was: gnl|Prokka|KFBDJDML_59); gnlProkkaKFBDJDML_60 (original name was: gnl|Prokka|KFBDJDML_60); gnlProkkaKFBDJDML_61 (original name was: gnl|Prokka|KFBDJDML_61); gnlProkkaKFBDJDML_62 (original name was: gnl|Prokka|KFBDJDML_62); gnlProkkaKFBDJDML_63 (original name was: gnl|Prokka|KFBDJDML_63); gnlProkkaKFBDJDML_65 (original name was: gnl|Prokka|KFBDJDML_65); gnlProkkaKFBDJDML_66 (original name was: gnl|Prokka|KFBDJDML_66); gnlProkkaKFBDJDML_67 (original name was: gnl|Prokka|KFBDJDML_67); gnlProkkaKFBDJDML_68 (original name was: gnl|Prokka|KFBDJDML_68); gnlProkkaKFBDJDML_69 (original name was: gnl|Prokka|KFBDJDML_69); gnlProkkaKFBDJDML_70 (original name was: gnl|Prokka|KFBDJDML_70); gnlProkkaKFBDJDML_71 (original name was: gnl|Prokka|KFBDJDML_71); gnlProkkaKFBDJDML_72 (original name was: gnl|Prokka|KFBDJDML_72); gnlProkkaKFBDJDML_73 (original name was: gnl|Prokka|KFBDJDML_73); gnlProkkaKFBDJDML_74 (original name was: gnl|Prokka|KFBDJDML_74); gnlProkkaKFBDJDML_75 (original name was: gnl|Prokka|KFBDJDML_75); gnlProkkaKFBDJDML_76 (original name was: gnl|Prokka|KFBDJDML_76); gnlProkkaKFBDJDML_77 (original name was: gnl|Prokka|KFBDJDML_77); gnlProkkaKFBDJDML_78 (original name was: gnl|Prokka|KFBDJDML_78); gnlProkkaKFBDJDML_79 (original name was: gnl|Prokka|KFBDJDML_79); gnlProkkaKFBDJDML_80 (original name was: gnl|Prokka|KFBDJDML_80); gnlProkkaKFBDJDML_81 (original name was: gnl|Prokka|KFBDJDML_81); gnlProkkaKFBDJDML_82 (original name was: gnl|Prokka|KFBDJDML_82); gnlProkkaKFBDJDML_83 (original name was: gnl|Prokka|KFBDJDML_83); gnlProkkaKFBDJDML_84 (original name was: gnl|Prokka|KFBDJDML_84)

Compact view

gnlProkkaKFBDJDML_3 - Region 1 - RRE-containing

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Location: 193,233 - 214,020 nt. (total: 20,788 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKFBDJDML_41 - Region 1 - RiPP-like

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Location: 1 - 9,885 nt. (total: 9,885 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKFBDJDML_64 - Region 1 - arylpolyene

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Location: 109,148 - 140,870 nt. (total: 31,723 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

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Similar known gene clusters from MIBiG 3.1