GCA_008571955.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDDHAJFMH_5 (original name was: gnl|Prokka|DDHAJFMH_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	resorcinol	58,436	99,575

gnlProkkaDDHAJFMH_11 (original name was: gnl|Prokka|DDHAJFMH_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RRE-containing	88,344	109,131

gnlProkkaDDHAJFMH_33 (original name was: gnl|Prokka|DDHAJFMH_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	arylpolyene	1	31,754	flexirubin	Other	36%
Region 33.2	RiPP-like	228,912	238,796

Region	Type	From	To	Most similar known cluster	Similarity
Region 5.1	resorcinol	58,436	99,575
Region 11.1	RRE-containing	88,344	109,131
Region 33.1	arylpolyene	1	31,754	flexirubin	Other	36%
Region 33.2	RiPP-like	228,912	238,796

No secondary metabolite regions were found in these records:: gnlProkkaDDHAJFMH_1 (original name was: gnl|Prokka|DDHAJFMH_1); gnlProkkaDDHAJFMH_2 (original name was: gnl|Prokka|DDHAJFMH_2); gnlProkkaDDHAJFMH_3 (original name was: gnl|Prokka|DDHAJFMH_3); gnlProkkaDDHAJFMH_4 (original name was: gnl|Prokka|DDHAJFMH_4); gnlProkkaDDHAJFMH_6 (original name was: gnl|Prokka|DDHAJFMH_6); gnlProkkaDDHAJFMH_7 (original name was: gnl|Prokka|DDHAJFMH_7); gnlProkkaDDHAJFMH_8 (original name was: gnl|Prokka|DDHAJFMH_8); gnlProkkaDDHAJFMH_9 (original name was: gnl|Prokka|DDHAJFMH_9); gnlProkkaDDHAJFMH_10 (original name was: gnl|Prokka|DDHAJFMH_10); gnlProkkaDDHAJFMH_12 (original name was: gnl|Prokka|DDHAJFMH_12); gnlProkkaDDHAJFMH_13 (original name was: gnl|Prokka|DDHAJFMH_13); gnlProkkaDDHAJFMH_14 (original name was: gnl|Prokka|DDHAJFMH_14); gnlProkkaDDHAJFMH_15 (original name was: gnl|Prokka|DDHAJFMH_15); gnlProkkaDDHAJFMH_16 (original name was: gnl|Prokka|DDHAJFMH_16); gnlProkkaDDHAJFMH_17 (original name was: gnl|Prokka|DDHAJFMH_17); gnlProkkaDDHAJFMH_18 (original name was: gnl|Prokka|DDHAJFMH_18); gnlProkkaDDHAJFMH_19 (original name was: gnl|Prokka|DDHAJFMH_19); gnlProkkaDDHAJFMH_20 (original name was: gnl|Prokka|DDHAJFMH_20); gnlProkkaDDHAJFMH_21 (original name was: gnl|Prokka|DDHAJFMH_21); gnlProkkaDDHAJFMH_22 (original name was: gnl|Prokka|DDHAJFMH_22); gnlProkkaDDHAJFMH_23 (original name was: gnl|Prokka|DDHAJFMH_23); gnlProkkaDDHAJFMH_24 (original name was: gnl|Prokka|DDHAJFMH_24); gnlProkkaDDHAJFMH_25 (original name was: gnl|Prokka|DDHAJFMH_25); gnlProkkaDDHAJFMH_26 (original name was: gnl|Prokka|DDHAJFMH_26); gnlProkkaDDHAJFMH_27 (original name was: gnl|Prokka|DDHAJFMH_27); gnlProkkaDDHAJFMH_28 (original name was: gnl|Prokka|DDHAJFMH_28); gnlProkkaDDHAJFMH_29 (original name was: gnl|Prokka|DDHAJFMH_29); gnlProkkaDDHAJFMH_30 (original name was: gnl|Prokka|DDHAJFMH_30); gnlProkkaDDHAJFMH_31 (original name was: gnl|Prokka|DDHAJFMH_31); gnlProkkaDDHAJFMH_32 (original name was: gnl|Prokka|DDHAJFMH_32); gnlProkkaDDHAJFMH_34 (original name was: gnl|Prokka|DDHAJFMH_34); gnlProkkaDDHAJFMH_35 (original name was: gnl|Prokka|DDHAJFMH_35); gnlProkkaDDHAJFMH_36 (original name was: gnl|Prokka|DDHAJFMH_36); gnlProkkaDDHAJFMH_37 (original name was: gnl|Prokka|DDHAJFMH_37); gnlProkkaDDHAJFMH_38 (original name was: gnl|Prokka|DDHAJFMH_38); gnlProkkaDDHAJFMH_39 (original name was: gnl|Prokka|DDHAJFMH_39); gnlProkkaDDHAJFMH_40 (original name was: gnl|Prokka|DDHAJFMH_40); gnlProkkaDDHAJFMH_41 (original name was: gnl|Prokka|DDHAJFMH_41); gnlProkkaDDHAJFMH_42 (original name was: gnl|Prokka|DDHAJFMH_42); gnlProkkaDDHAJFMH_43 (original name was: gnl|Prokka|DDHAJFMH_43); gnlProkkaDDHAJFMH_44 (original name was: gnl|Prokka|DDHAJFMH_44); gnlProkkaDDHAJFMH_45 (original name was: gnl|Prokka|DDHAJFMH_45); gnlProkkaDDHAJFMH_46 (original name was: gnl|Prokka|DDHAJFMH_46); gnlProkkaDDHAJFMH_47 (original name was: gnl|Prokka|DDHAJFMH_47); gnlProkkaDDHAJFMH_48 (original name was: gnl|Prokka|DDHAJFMH_48); gnlProkkaDDHAJFMH_49 (original name was: gnl|Prokka|DDHAJFMH_49); gnlProkkaDDHAJFMH_50 (original name was: gnl|Prokka|DDHAJFMH_50); gnlProkkaDDHAJFMH_51 (original name was: gnl|Prokka|DDHAJFMH_51); gnlProkkaDDHAJFMH_52 (original name was: gnl|Prokka|DDHAJFMH_52); gnlProkkaDDHAJFMH_53 (original name was: gnl|Prokka|DDHAJFMH_53); gnlProkkaDDHAJFMH_54 (original name was: gnl|Prokka|DDHAJFMH_54); gnlProkkaDDHAJFMH_55 (original name was: gnl|Prokka|DDHAJFMH_55); gnlProkkaDDHAJFMH_56 (original name was: gnl|Prokka|DDHAJFMH_56); gnlProkkaDDHAJFMH_57 (original name was: gnl|Prokka|DDHAJFMH_57); gnlProkkaDDHAJFMH_58 (original name was: gnl|Prokka|DDHAJFMH_58); gnlProkkaDDHAJFMH_59 (original name was: gnl|Prokka|DDHAJFMH_59); gnlProkkaDDHAJFMH_60 (original name was: gnl|Prokka|DDHAJFMH_60); gnlProkkaDDHAJFMH_61 (original name was: gnl|Prokka|DDHAJFMH_61); gnlProkkaDDHAJFMH_62 (original name was: gnl|Prokka|DDHAJFMH_62); gnlProkkaDDHAJFMH_63 (original name was: gnl|Prokka|DDHAJFMH_63); gnlProkkaDDHAJFMH_64 (original name was: gnl|Prokka|DDHAJFMH_64); gnlProkkaDDHAJFMH_65 (original name was: gnl|Prokka|DDHAJFMH_65); gnlProkkaDDHAJFMH_66 (original name was: gnl|Prokka|DDHAJFMH_66); gnlProkkaDDHAJFMH_67 (original name was: gnl|Prokka|DDHAJFMH_67); gnlProkkaDDHAJFMH_68 (original name was: gnl|Prokka|DDHAJFMH_68); gnlProkkaDDHAJFMH_69 (original name was: gnl|Prokka|DDHAJFMH_69); gnlProkkaDDHAJFMH_70 (original name was: gnl|Prokka|DDHAJFMH_70); gnlProkkaDDHAJFMH_71 (original name was: gnl|Prokka|DDHAJFMH_71); gnlProkkaDDHAJFMH_72 (original name was: gnl|Prokka|DDHAJFMH_72); gnlProkkaDDHAJFMH_73 (original name was: gnl|Prokka|DDHAJFMH_73); gnlProkkaDDHAJFMH_74 (original name was: gnl|Prokka|DDHAJFMH_74); gnlProkkaDDHAJFMH_75 (original name was: gnl|Prokka|DDHAJFMH_75); gnlProkkaDDHAJFMH_76 (original name was: gnl|Prokka|DDHAJFMH_76); gnlProkkaDDHAJFMH_77 (original name was: gnl|Prokka|DDHAJFMH_77); gnlProkkaDDHAJFMH_78 (original name was: gnl|Prokka|DDHAJFMH_78); gnlProkkaDDHAJFMH_79 (original name was: gnl|Prokka|DDHAJFMH_79); gnlProkkaDDHAJFMH_80 (original name was: gnl|Prokka|DDHAJFMH_80); gnlProkkaDDHAJFMH_81 (original name was: gnl|Prokka|DDHAJFMH_81); gnlProkkaDDHAJFMH_82 (original name was: gnl|Prokka|DDHAJFMH_82); gnlProkkaDDHAJFMH_83 (original name was: gnl|Prokka|DDHAJFMH_83); gnlProkkaDDHAJFMH_84 (original name was: gnl|Prokka|DDHAJFMH_84)

Compact view

gnlProkkaDDHAJFMH_5 - Region 1 - resorcinol

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Location: 58,436 - 99,575 nt. (total: 41,140 nt) Show pHMM detection rules used

resorcinol: DarB

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core biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDDHAJFMH_11 - Region 1 - RRE-containing

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Location: 88,344 - 109,131 nt. (total: 20,788 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDDHAJFMH_33 - Region 1 - arylpolyene

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Location: 1 - 31,754 nt. (total: 31,754 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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NRPS/PKS domains

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Similar known gene clusters from MIBiG 3.1

gnlProkkaDDHAJFMH_33 - Region 2 - RiPP-like

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Location: 228,912 - 238,796 nt. (total: 9,885 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.