GCA_008572035.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGMAKPBAG_2 (original name was: gnl|Prokka|GMAKPBAG_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	1	9,885
Region 2.2	arylpolyene	207,339	254,850	flexirubin	Other	36%

gnlProkkaGMAKPBAG_8 (original name was: gnl|Prokka|GMAKPBAG_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	resorcinol	41,750	82,889

gnlProkkaGMAKPBAG_11 (original name was: gnl|Prokka|GMAKPBAG_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RRE-containing	70,607	91,394

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	RiPP-like	1	9,885
Region 2.2	arylpolyene	207,339	254,850	flexirubin	Other	36%
Region 8.1	resorcinol	41,750	82,889
Region 11.1	RRE-containing	70,607	91,394

No secondary metabolite regions were found in these records:: gnlProkkaGMAKPBAG_1 (original name was: gnl|Prokka|GMAKPBAG_1); gnlProkkaGMAKPBAG_3 (original name was: gnl|Prokka|GMAKPBAG_3); gnlProkkaGMAKPBAG_4 (original name was: gnl|Prokka|GMAKPBAG_4); gnlProkkaGMAKPBAG_5 (original name was: gnl|Prokka|GMAKPBAG_5); gnlProkkaGMAKPBAG_6 (original name was: gnl|Prokka|GMAKPBAG_6); gnlProkkaGMAKPBAG_7 (original name was: gnl|Prokka|GMAKPBAG_7); gnlProkkaGMAKPBAG_9 (original name was: gnl|Prokka|GMAKPBAG_9); gnlProkkaGMAKPBAG_10 (original name was: gnl|Prokka|GMAKPBAG_10); gnlProkkaGMAKPBAG_12 (original name was: gnl|Prokka|GMAKPBAG_12); gnlProkkaGMAKPBAG_13 (original name was: gnl|Prokka|GMAKPBAG_13); gnlProkkaGMAKPBAG_14 (original name was: gnl|Prokka|GMAKPBAG_14); gnlProkkaGMAKPBAG_15 (original name was: gnl|Prokka|GMAKPBAG_15); gnlProkkaGMAKPBAG_16 (original name was: gnl|Prokka|GMAKPBAG_16); gnlProkkaGMAKPBAG_17 (original name was: gnl|Prokka|GMAKPBAG_17); gnlProkkaGMAKPBAG_18 (original name was: gnl|Prokka|GMAKPBAG_18); gnlProkkaGMAKPBAG_19 (original name was: gnl|Prokka|GMAKPBAG_19); gnlProkkaGMAKPBAG_20 (original name was: gnl|Prokka|GMAKPBAG_20); gnlProkkaGMAKPBAG_21 (original name was: gnl|Prokka|GMAKPBAG_21); gnlProkkaGMAKPBAG_22 (original name was: gnl|Prokka|GMAKPBAG_22); gnlProkkaGMAKPBAG_23 (original name was: gnl|Prokka|GMAKPBAG_23); gnlProkkaGMAKPBAG_24 (original name was: gnl|Prokka|GMAKPBAG_24); gnlProkkaGMAKPBAG_25 (original name was: gnl|Prokka|GMAKPBAG_25); gnlProkkaGMAKPBAG_26 (original name was: gnl|Prokka|GMAKPBAG_26); gnlProkkaGMAKPBAG_27 (original name was: gnl|Prokka|GMAKPBAG_27); gnlProkkaGMAKPBAG_28 (original name was: gnl|Prokka|GMAKPBAG_28); gnlProkkaGMAKPBAG_29 (original name was: gnl|Prokka|GMAKPBAG_29); gnlProkkaGMAKPBAG_30 (original name was: gnl|Prokka|GMAKPBAG_30); gnlProkkaGMAKPBAG_31 (original name was: gnl|Prokka|GMAKPBAG_31); gnlProkkaGMAKPBAG_32 (original name was: gnl|Prokka|GMAKPBAG_32); gnlProkkaGMAKPBAG_33 (original name was: gnl|Prokka|GMAKPBAG_33); gnlProkkaGMAKPBAG_34 (original name was: gnl|Prokka|GMAKPBAG_34); gnlProkkaGMAKPBAG_35 (original name was: gnl|Prokka|GMAKPBAG_35); gnlProkkaGMAKPBAG_36 (original name was: gnl|Prokka|GMAKPBAG_36); gnlProkkaGMAKPBAG_37 (original name was: gnl|Prokka|GMAKPBAG_37); gnlProkkaGMAKPBAG_38 (original name was: gnl|Prokka|GMAKPBAG_38); gnlProkkaGMAKPBAG_39 (original name was: gnl|Prokka|GMAKPBAG_39); gnlProkkaGMAKPBAG_40 (original name was: gnl|Prokka|GMAKPBAG_40); gnlProkkaGMAKPBAG_41 (original name was: gnl|Prokka|GMAKPBAG_41); gnlProkkaGMAKPBAG_42 (original name was: gnl|Prokka|GMAKPBAG_42); gnlProkkaGMAKPBAG_43 (original name was: gnl|Prokka|GMAKPBAG_43); gnlProkkaGMAKPBAG_44 (original name was: gnl|Prokka|GMAKPBAG_44); gnlProkkaGMAKPBAG_45 (original name was: gnl|Prokka|GMAKPBAG_45); gnlProkkaGMAKPBAG_46 (original name was: gnl|Prokka|GMAKPBAG_46); gnlProkkaGMAKPBAG_47 (original name was: gnl|Prokka|GMAKPBAG_47); gnlProkkaGMAKPBAG_48 (original name was: gnl|Prokka|GMAKPBAG_48); gnlProkkaGMAKPBAG_49 (original name was: gnl|Prokka|GMAKPBAG_49); gnlProkkaGMAKPBAG_50 (original name was: gnl|Prokka|GMAKPBAG_50); gnlProkkaGMAKPBAG_51 (original name was: gnl|Prokka|GMAKPBAG_51); gnlProkkaGMAKPBAG_52 (original name was: gnl|Prokka|GMAKPBAG_52); gnlProkkaGMAKPBAG_53 (original name was: gnl|Prokka|GMAKPBAG_53); gnlProkkaGMAKPBAG_54 (original name was: gnl|Prokka|GMAKPBAG_54); gnlProkkaGMAKPBAG_55 (original name was: gnl|Prokka|GMAKPBAG_55); gnlProkkaGMAKPBAG_56 (original name was: gnl|Prokka|GMAKPBAG_56); gnlProkkaGMAKPBAG_57 (original name was: gnl|Prokka|GMAKPBAG_57); gnlProkkaGMAKPBAG_58 (original name was: gnl|Prokka|GMAKPBAG_58); gnlProkkaGMAKPBAG_59 (original name was: gnl|Prokka|GMAKPBAG_59); gnlProkkaGMAKPBAG_60 (original name was: gnl|Prokka|GMAKPBAG_60); gnlProkkaGMAKPBAG_61 (original name was: gnl|Prokka|GMAKPBAG_61); gnlProkkaGMAKPBAG_62 (original name was: gnl|Prokka|GMAKPBAG_62); gnlProkkaGMAKPBAG_63 (original name was: gnl|Prokka|GMAKPBAG_63); gnlProkkaGMAKPBAG_64 (original name was: gnl|Prokka|GMAKPBAG_64); gnlProkkaGMAKPBAG_65 (original name was: gnl|Prokka|GMAKPBAG_65); gnlProkkaGMAKPBAG_66 (original name was: gnl|Prokka|GMAKPBAG_66); gnlProkkaGMAKPBAG_67 (original name was: gnl|Prokka|GMAKPBAG_67); gnlProkkaGMAKPBAG_68 (original name was: gnl|Prokka|GMAKPBAG_68); gnlProkkaGMAKPBAG_69 (original name was: gnl|Prokka|GMAKPBAG_69); gnlProkkaGMAKPBAG_70 (original name was: gnl|Prokka|GMAKPBAG_70)

Compact view

gnlProkkaGMAKPBAG_2 - Region 1 - RiPP-like

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Location: 1 - 9,885 nt. (total: 9,885 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGMAKPBAG_2 - Region 2 - arylpolyene

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Location: 207,339 - 254,850 nt. (total: 47,512 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

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resistance

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NRPS/PKS domains

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Similar known gene clusters from MIBiG 3.1

gnlProkkaGMAKPBAG_8 - Region 1 - resorcinol

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Location: 41,750 - 82,889 nt. (total: 41,140 nt) Show pHMM detection rules used

resorcinol: DarB

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGMAKPBAG_11 - Region 1 - RRE-containing

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Location: 70,607 - 91,394 nt. (total: 20,788 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.