GCA_008572205.1 - 10 region(s)

Identified primary metabolite regions

c00022_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_22)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 22.1	Pyruvate2acetate-formate	SCFA	76,417	99,442	Pyruvate to acetate-formate B. thetaiotaomicron	PFL_acetate	100%

c00075_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_75)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 75.1	PFOR_II_pathway	SCFA	14,460	38,005	PFOR II pathway B. thetaiotaomicron	PFORII	100%

c00077_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_77)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 77.1	porA	SCFA	311,128	333,965	porA C. sporogenes	POR	60%

c00079_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_79)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 79.1	Rnf_complex	E-MGC	38,700	64,036	Rnf complex C. sporogenes	RNF	83%

c00088_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_88)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 88.1	TPP_AA_metabolism	Putative	357,630	383,617
Region 88.2	succinate2propionate	SCFA	419,923	444,566	Succinate to propionate B. theta	PRO	50%

c00090_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_90)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 90.1	TPP_fatty_acids	Putative	1,753	25,820

c00092_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_92)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 92.1	NADH_dehydrogenase_I	E-MGC	19,012	48,881	NADH dehydrogenase I Bacteroides sp.	NADHD	61%

c00133_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_133)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 133.1	fatty_acids-unassigned	Putative	187,421	215,889

c00166_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_166)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 166.1	Fumarate2succinate	SCFA	39,618	63,073	Fumarate to succinate B. thetaiotaomicron	SUC	100%

No primary metabolite regions were found in these records:: c00001_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_1); c00002_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_2); c00003_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_3); c00004_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_4); c00005_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_5); c00006_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_6); c00007_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_7); c00008_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_8); c00009_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_9); c00010_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_10); c00011_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_11); c00012_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_12); c00013_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_13); c00014_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_14); c00015_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_15); c00016_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_16); c00017_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_17); c00018_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_18); c00019_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_19); c00020_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_20); c00021_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_21); c00023_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_23); c00024_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_24); c00025_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_25); c00026_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_26); c00027_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_27); c00028_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_28); c00029_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_29); c00030_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_30); c00031_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_31); c00032_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_32); c00033_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_33); c00034_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_34); c00035_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_35); c00036_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_36); c00037_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_37); c00038_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_38); c00039_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_39); c00040_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_40); c00041_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_41); c00042_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_42); c00043_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_43); c00044_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_44); c00045_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_45); c00046_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_46); c00047_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_47); c00048_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_48); c00049_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_49); c00050_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_50); c00051_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_51); c00052_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_52); c00053_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_53); c00054_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_54); c00055_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_55); c00056_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_56); c00057_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_57); c00058_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_58); c00059_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_59); c00060_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_60); c00061_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_61); c00062_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_62); c00063_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_63); c00064_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_64); c00065_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_65); c00066_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_66); c00067_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_67); c00068_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_68); c00069_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_69); c00070_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_70); c00071_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_71); c00072_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_72); c00073_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_73); c00074_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_74); c00076_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_76); c00078_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_78); c00080_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_80); c00081_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_81); c00082_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_82); c00083_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_83); c00084_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_84); c00085_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_85); c00086_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_86); c00087_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_87); c00089_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_89); c00091_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_91); c00093_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_93); c00094_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_94); c00095_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_95); c00096_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_96); c00097_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_97); c00098_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_98); c00099_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_99); c00100_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_100); c00101_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_101); c00102_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_102); c00103_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_103); c00104_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_104); c00105_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_105); c00106_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_106); c00107_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_107); c00108_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_108); c00109_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_109); c00110_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_110); c00111_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_111); c00112_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_112); c00113_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_113); c00114_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_114); c00115_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_115); c00116_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_116); c00117_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_117); c00118_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_118); c00119_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_119); c00120_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_120); c00121_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_121); c00122_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_122); c00123_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_123); c00124_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_124); c00125_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_125); c00126_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_126); c00127_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_127); c00128_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_128); c00129_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_129); c00130_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_130); c00131_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_131); c00132_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_132); c00134_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_134); c00135_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_135); c00136_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_136); c00137_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_137); c00138_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_138); c00139_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_139); c00140_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_140); c00141_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_141); c00142_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_142); c00143_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_143); c00144_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_144); c00145_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_145); c00146_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_146); c00147_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_147); c00148_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_148); c00149_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_149); c00150_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_150); c00151_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_151); c00152_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_152); c00153_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_153); c00154_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_154); c00155_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_155); c00156_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_156); c00157_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_157); c00158_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_158); c00159_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_159); c00160_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_160); c00161_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_161); c00162_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_162); c00163_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_163); c00164_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_164); c00165_gnlPro.. (original name was: gnl|Prokka|BCLHLCHL_165)

Compact view

c00022_gnlPro.. - Region 1 - Pyruvate2acetate-formate

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Location: 76,417 - 99,442 nt. (total: 23,026 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

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c00075_gnlPro.. - Region 1 - PFOR_II_pathway

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Location: 14,460 - 38,005 nt. (total: 23,546 nt) Show pHMM detection rules used

PFOR_II_pathway: cds(POR and POR_N and PFOR_II and EKR and Fer4_16 and TPP_enzyme_C)

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c00077_gnlPro.. - Region 1 - porA

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Location: 311,128 - 333,965 nt. (total: 22,838 nt) Show pHMM detection rules used

porA: (Fer4_7 and TPP_enzyme_C and POR and POR_N and PFOR_II and not (EKR or Fer4_16))

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c00079_gnlPro.. - Region 1 - Rnf_complex

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Location: 38,700 - 64,036 nt. (total: 25,337 nt) Show pHMM detection rules used

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

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c00088_gnlPro.. - Region 1 - TPP_AA_metabolism

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Location: 357,630 - 383,617 nt. (total: 25,988 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

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c00088_gnlPro.. - Region 2 - succinate2propionate

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Location: 419,923 - 444,566 nt. (total: 24,644 nt) Show pHMM detection rules used

succinate2propionate: (minimum(4, [AcetylCoA_hyd_C, AcetylCoA_hydro, B12-binding, Biotin_lipoyl, Glyoxalase_4, HMGL-like, MM_CoA_mutase, MeaB, OAD_beta, OAD_gamma, PYC_OADA]) and minimum(1, [CT_Btheta, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, CT_Vparvula]) and not Cytidylate_kin)

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c00090_gnlPro.. - Region 1 - TPP_fatty_acids

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Location: 1,753 - 25,820 nt. (total: 24,068 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

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c00092_gnlPro.. - Region 1 - NADH_dehydrogenase_I

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Location: 19,012 - 48,881 nt. (total: 29,870 nt) Show pHMM detection rules used

NADH_dehydrogenase_I: (Oxidored_q4 and Oxidored_q6 and Complex1_30kDa and Complex1_49kDa and NADHdh and Oxidored_q3 and Oxidored_q2 and minimum(4, [Fe-2S_thioredx, Fer2_4, Fer4_7, Molybdop_Fe4S4, Molydop_binding, NADH-G_4Fe-4S_3, NADH_4Fe-4S, Proton_antipo_M, Proton_antipo_N, SLBB]))

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c00133_gnlPro.. - Region 1 - fatty_acids-unassigned

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Location: 187,421 - 215,889 nt. (total: 28,469 nt) Show pHMM detection rules used

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

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c00166_gnlPro.. - Region 1 - Fumarate2succinate

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Location: 39,618 - 63,073 nt. (total: 23,456 nt) Show pHMM detection rules used

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

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