GCA_008868495.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaALIJPCPC_1 (original name was: gnl|Prokka|ALIJPCPC_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	91,255	132,424

gnlProkkaALIJPCPC_12 (original name was: gnl|Prokka|ALIJPCPC_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	cyclic-lactone-autoinducer	38,581	59,286

gnlProkkaALIJPCPC_45 (original name was: gnl|Prokka|ALIJPCPC_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 41.1	RiPP-like	102,820	114,970

gnlProkkaALIJPCPC_62 (original name was: gnl|Prokka|ALIJPCPC_62)

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	terpene	76,097	96,978

Region	Type	From	To	Similarity
Region 1.1	T3PKS	91,255	132,424
Region 12.1	cyclic-lactone-autoinducer	38,581	59,286
Region 41.1	RiPP-like	102,820	114,970
Region 45.1	terpene	76,097	96,978

No secondary metabolite regions were found in these records:: gnlProkkaALIJPCPC_2 (original name was: gnl|Prokka|ALIJPCPC_2); gnlProkkaALIJPCPC_3 (original name was: gnl|Prokka|ALIJPCPC_3); gnlProkkaALIJPCPC_4 (original name was: gnl|Prokka|ALIJPCPC_4); gnlProkkaALIJPCPC_5 (original name was: gnl|Prokka|ALIJPCPC_5); gnlProkkaALIJPCPC_6 (original name was: gnl|Prokka|ALIJPCPC_6); gnlProkkaALIJPCPC_7 (original name was: gnl|Prokka|ALIJPCPC_7); gnlProkkaALIJPCPC_8 (original name was: gnl|Prokka|ALIJPCPC_8); gnlProkkaALIJPCPC_9 (original name was: gnl|Prokka|ALIJPCPC_9); gnlProkkaALIJPCPC_10 (original name was: gnl|Prokka|ALIJPCPC_10); gnlProkkaALIJPCPC_11 (original name was: gnl|Prokka|ALIJPCPC_11); gnlProkkaALIJPCPC_13 (original name was: gnl|Prokka|ALIJPCPC_13); gnlProkkaALIJPCPC_14 (original name was: gnl|Prokka|ALIJPCPC_14); gnlProkkaALIJPCPC_15 (original name was: gnl|Prokka|ALIJPCPC_15); gnlProkkaALIJPCPC_16 (original name was: gnl|Prokka|ALIJPCPC_16); gnlProkkaALIJPCPC_17 (original name was: gnl|Prokka|ALIJPCPC_17); gnlProkkaALIJPCPC_18 (original name was: gnl|Prokka|ALIJPCPC_18); gnlProkkaALIJPCPC_19 (original name was: gnl|Prokka|ALIJPCPC_19); gnlProkkaALIJPCPC_20 (original name was: gnl|Prokka|ALIJPCPC_20); gnlProkkaALIJPCPC_21 (original name was: gnl|Prokka|ALIJPCPC_21); gnlProkkaALIJPCPC_22 (original name was: gnl|Prokka|ALIJPCPC_22); gnlProkkaALIJPCPC_23 (original name was: gnl|Prokka|ALIJPCPC_23); gnlProkkaALIJPCPC_24 (original name was: gnl|Prokka|ALIJPCPC_24); gnlProkkaALIJPCPC_25 (original name was: gnl|Prokka|ALIJPCPC_25); gnlProkkaALIJPCPC_26 (original name was: gnl|Prokka|ALIJPCPC_26); gnlProkkaALIJPCPC_27 (original name was: gnl|Prokka|ALIJPCPC_27); gnlProkkaALIJPCPC_28 (original name was: gnl|Prokka|ALIJPCPC_28); gnlProkkaALIJPCPC_29 (original name was: gnl|Prokka|ALIJPCPC_29); gnlProkkaALIJPCPC_30 (original name was: gnl|Prokka|ALIJPCPC_30); gnlProkkaALIJPCPC_31 (original name was: gnl|Prokka|ALIJPCPC_31); gnlProkkaALIJPCPC_32 (original name was: gnl|Prokka|ALIJPCPC_32); gnlProkkaALIJPCPC_33 (original name was: gnl|Prokka|ALIJPCPC_33); gnlProkkaALIJPCPC_34 (original name was: gnl|Prokka|ALIJPCPC_34); gnlProkkaALIJPCPC_35 (original name was: gnl|Prokka|ALIJPCPC_35); gnlProkkaALIJPCPC_36 (original name was: gnl|Prokka|ALIJPCPC_36); gnlProkkaALIJPCPC_37 (original name was: gnl|Prokka|ALIJPCPC_37); gnlProkkaALIJPCPC_38 (original name was: gnl|Prokka|ALIJPCPC_38); gnlProkkaALIJPCPC_39 (original name was: gnl|Prokka|ALIJPCPC_39); gnlProkkaALIJPCPC_40 (original name was: gnl|Prokka|ALIJPCPC_40); gnlProkkaALIJPCPC_56 (original name was: gnl|Prokka|ALIJPCPC_56); gnlProkkaALIJPCPC_60 (original name was: gnl|Prokka|ALIJPCPC_60); gnlProkkaALIJPCPC_61 (original name was: gnl|Prokka|ALIJPCPC_61)

Compact view

gnlProkkaALIJPCPC_1 - Region 1 - T3PKS

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Location: 91,255 - 132,424 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaALIJPCPC_12 - Region 1 - cyclic-lactone-autoinducer

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Location: 38,581 - 59,286 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaALIJPCPC_45 - Region 1 - RiPP-like

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Location: 102,820 - 114,970 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaALIJPCPC_62 - Region 1 - terpene

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Location: 76,097 - 96,978 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.