GCA_009020315.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLLIHOBAM_3 (original name was: gnl|Prokka|LLIHOBAM_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	phosphonate	36,600	61,633	polysaccharide B	Saccharide	10%

gnlProkkaLLIHOBAM_7 (original name was: gnl|Prokka|LLIHOBAM_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	resorcinol	1	32,812

gnlProkkaLLIHOBAM_18 (original name was: gnl|Prokka|LLIHOBAM_18)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	RRE-containing	1	18,238

gnlProkkaLLIHOBAM_55 (original name was: gnl|Prokka|LLIHOBAM_55)

Region	Type	From	To	Most similar known cluster		Similarity
Region 55.1	RRE-containing	112,876	133,229

No secondary metabolite regions were found in these records:: gnlProkkaLLIHOBAM_1 (original name was: gnl|Prokka|LLIHOBAM_1); gnlProkkaLLIHOBAM_2 (original name was: gnl|Prokka|LLIHOBAM_2); gnlProkkaLLIHOBAM_4 (original name was: gnl|Prokka|LLIHOBAM_4); gnlProkkaLLIHOBAM_5 (original name was: gnl|Prokka|LLIHOBAM_5); gnlProkkaLLIHOBAM_6 (original name was: gnl|Prokka|LLIHOBAM_6); gnlProkkaLLIHOBAM_8 (original name was: gnl|Prokka|LLIHOBAM_8); gnlProkkaLLIHOBAM_9 (original name was: gnl|Prokka|LLIHOBAM_9); gnlProkkaLLIHOBAM_10 (original name was: gnl|Prokka|LLIHOBAM_10); gnlProkkaLLIHOBAM_11 (original name was: gnl|Prokka|LLIHOBAM_11); gnlProkkaLLIHOBAM_12 (original name was: gnl|Prokka|LLIHOBAM_12); gnlProkkaLLIHOBAM_13 (original name was: gnl|Prokka|LLIHOBAM_13); gnlProkkaLLIHOBAM_14 (original name was: gnl|Prokka|LLIHOBAM_14); gnlProkkaLLIHOBAM_15 (original name was: gnl|Prokka|LLIHOBAM_15); gnlProkkaLLIHOBAM_16 (original name was: gnl|Prokka|LLIHOBAM_16); gnlProkkaLLIHOBAM_17 (original name was: gnl|Prokka|LLIHOBAM_17); gnlProkkaLLIHOBAM_19 (original name was: gnl|Prokka|LLIHOBAM_19); gnlProkkaLLIHOBAM_20 (original name was: gnl|Prokka|LLIHOBAM_20); gnlProkkaLLIHOBAM_21 (original name was: gnl|Prokka|LLIHOBAM_21); gnlProkkaLLIHOBAM_22 (original name was: gnl|Prokka|LLIHOBAM_22); gnlProkkaLLIHOBAM_23 (original name was: gnl|Prokka|LLIHOBAM_23); gnlProkkaLLIHOBAM_24 (original name was: gnl|Prokka|LLIHOBAM_24); gnlProkkaLLIHOBAM_25 (original name was: gnl|Prokka|LLIHOBAM_25); gnlProkkaLLIHOBAM_26 (original name was: gnl|Prokka|LLIHOBAM_26); gnlProkkaLLIHOBAM_27 (original name was: gnl|Prokka|LLIHOBAM_27); gnlProkkaLLIHOBAM_28 (original name was: gnl|Prokka|LLIHOBAM_28); gnlProkkaLLIHOBAM_29 (original name was: gnl|Prokka|LLIHOBAM_29); gnlProkkaLLIHOBAM_30 (original name was: gnl|Prokka|LLIHOBAM_30); gnlProkkaLLIHOBAM_31 (original name was: gnl|Prokka|LLIHOBAM_31); gnlProkkaLLIHOBAM_32 (original name was: gnl|Prokka|LLIHOBAM_32); gnlProkkaLLIHOBAM_33 (original name was: gnl|Prokka|LLIHOBAM_33); gnlProkkaLLIHOBAM_34 (original name was: gnl|Prokka|LLIHOBAM_34); gnlProkkaLLIHOBAM_35 (original name was: gnl|Prokka|LLIHOBAM_35); gnlProkkaLLIHOBAM_36 (original name was: gnl|Prokka|LLIHOBAM_36); gnlProkkaLLIHOBAM_37 (original name was: gnl|Prokka|LLIHOBAM_37); gnlProkkaLLIHOBAM_38 (original name was: gnl|Prokka|LLIHOBAM_38); gnlProkkaLLIHOBAM_39 (original name was: gnl|Prokka|LLIHOBAM_39); gnlProkkaLLIHOBAM_40 (original name was: gnl|Prokka|LLIHOBAM_40); gnlProkkaLLIHOBAM_41 (original name was: gnl|Prokka|LLIHOBAM_41); gnlProkkaLLIHOBAM_42 (original name was: gnl|Prokka|LLIHOBAM_42); gnlProkkaLLIHOBAM_43 (original name was: gnl|Prokka|LLIHOBAM_43); gnlProkkaLLIHOBAM_44 (original name was: gnl|Prokka|LLIHOBAM_44); gnlProkkaLLIHOBAM_45 (original name was: gnl|Prokka|LLIHOBAM_45); gnlProkkaLLIHOBAM_46 (original name was: gnl|Prokka|LLIHOBAM_46); gnlProkkaLLIHOBAM_47 (original name was: gnl|Prokka|LLIHOBAM_47); gnlProkkaLLIHOBAM_48 (original name was: gnl|Prokka|LLIHOBAM_48); gnlProkkaLLIHOBAM_49 (original name was: gnl|Prokka|LLIHOBAM_49); gnlProkkaLLIHOBAM_50 (original name was: gnl|Prokka|LLIHOBAM_50); gnlProkkaLLIHOBAM_51 (original name was: gnl|Prokka|LLIHOBAM_51); gnlProkkaLLIHOBAM_52 (original name was: gnl|Prokka|LLIHOBAM_52); gnlProkkaLLIHOBAM_53 (original name was: gnl|Prokka|LLIHOBAM_53); gnlProkkaLLIHOBAM_54 (original name was: gnl|Prokka|LLIHOBAM_54); gnlProkkaLLIHOBAM_56 (original name was: gnl|Prokka|LLIHOBAM_56); gnlProkkaLLIHOBAM_57 (original name was: gnl|Prokka|LLIHOBAM_57); gnlProkkaLLIHOBAM_58 (original name was: gnl|Prokka|LLIHOBAM_58); gnlProkkaLLIHOBAM_59 (original name was: gnl|Prokka|LLIHOBAM_59); gnlProkkaLLIHOBAM_60 (original name was: gnl|Prokka|LLIHOBAM_60); gnlProkkaLLIHOBAM_61 (original name was: gnl|Prokka|LLIHOBAM_61); gnlProkkaLLIHOBAM_62 (original name was: gnl|Prokka|LLIHOBAM_62); gnlProkkaLLIHOBAM_63 (original name was: gnl|Prokka|LLIHOBAM_63); gnlProkkaLLIHOBAM_64 (original name was: gnl|Prokka|LLIHOBAM_64); gnlProkkaLLIHOBAM_65 (original name was: gnl|Prokka|LLIHOBAM_65); gnlProkkaLLIHOBAM_66 (original name was: gnl|Prokka|LLIHOBAM_66); gnlProkkaLLIHOBAM_67 (original name was: gnl|Prokka|LLIHOBAM_67); gnlProkkaLLIHOBAM_68 (original name was: gnl|Prokka|LLIHOBAM_68); gnlProkkaLLIHOBAM_69 (original name was: gnl|Prokka|LLIHOBAM_69); gnlProkkaLLIHOBAM_70 (original name was: gnl|Prokka|LLIHOBAM_70); gnlProkkaLLIHOBAM_71 (original name was: gnl|Prokka|LLIHOBAM_71)

Compact view

gnlProkkaLLIHOBAM_3 - Region 1 - phosphonate

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Location: 36,600 - 61,633 nt. (total: 25,034 nt) Show pHMM detection rules used

phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

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core biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaLLIHOBAM_7 - Region 1 - resorcinol

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Location: 1 - 32,812 nt. (total: 32,812 nt) Show pHMM detection rules used

Region on contig edge.

resorcinol: DarB

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLLIHOBAM_18 - Region 1 - RRE-containing

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Location: 1 - 18,238 nt. (total: 18,238 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLLIHOBAM_55 - Region 1 - RRE-containing

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Location: 112,876 - 133,229 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.