GCA_009020805.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEFGINGHK_3 (original name was: gnl|Prokka|EFGINGHK_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RRE-containing	38,443	58,709

gnlProkkaEFGINGHK_22 (original name was: gnl|Prokka|EFGINGHK_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RRE-containing	139,529	159,882

gnlProkkaEFGINGHK_77 (original name was: gnl|Prokka|EFGINGHK_77)

Region	Type	From	To	Most similar known cluster		Similarity
Region 77.1	RiPP-like	56,931	69,099

Region	Type	From	To	Similarity
Region 3.1	RRE-containing	38,443	58,709
Region 22.1	RRE-containing	139,529	159,882
Region 77.1	RiPP-like	56,931	69,099

No secondary metabolite regions were found in these records:: gnlProkkaEFGINGHK_1 (original name was: gnl|Prokka|EFGINGHK_1); gnlProkkaEFGINGHK_2 (original name was: gnl|Prokka|EFGINGHK_2); gnlProkkaEFGINGHK_4 (original name was: gnl|Prokka|EFGINGHK_4); gnlProkkaEFGINGHK_5 (original name was: gnl|Prokka|EFGINGHK_5); gnlProkkaEFGINGHK_6 (original name was: gnl|Prokka|EFGINGHK_6); gnlProkkaEFGINGHK_7 (original name was: gnl|Prokka|EFGINGHK_7); gnlProkkaEFGINGHK_8 (original name was: gnl|Prokka|EFGINGHK_8); gnlProkkaEFGINGHK_9 (original name was: gnl|Prokka|EFGINGHK_9); gnlProkkaEFGINGHK_10 (original name was: gnl|Prokka|EFGINGHK_10); gnlProkkaEFGINGHK_11 (original name was: gnl|Prokka|EFGINGHK_11); gnlProkkaEFGINGHK_12 (original name was: gnl|Prokka|EFGINGHK_12); gnlProkkaEFGINGHK_13 (original name was: gnl|Prokka|EFGINGHK_13); gnlProkkaEFGINGHK_14 (original name was: gnl|Prokka|EFGINGHK_14); gnlProkkaEFGINGHK_15 (original name was: gnl|Prokka|EFGINGHK_15); gnlProkkaEFGINGHK_16 (original name was: gnl|Prokka|EFGINGHK_16); gnlProkkaEFGINGHK_17 (original name was: gnl|Prokka|EFGINGHK_17); gnlProkkaEFGINGHK_18 (original name was: gnl|Prokka|EFGINGHK_18); gnlProkkaEFGINGHK_19 (original name was: gnl|Prokka|EFGINGHK_19); gnlProkkaEFGINGHK_20 (original name was: gnl|Prokka|EFGINGHK_20); gnlProkkaEFGINGHK_21 (original name was: gnl|Prokka|EFGINGHK_21); gnlProkkaEFGINGHK_23 (original name was: gnl|Prokka|EFGINGHK_23); gnlProkkaEFGINGHK_24 (original name was: gnl|Prokka|EFGINGHK_24); gnlProkkaEFGINGHK_25 (original name was: gnl|Prokka|EFGINGHK_25); gnlProkkaEFGINGHK_26 (original name was: gnl|Prokka|EFGINGHK_26); gnlProkkaEFGINGHK_27 (original name was: gnl|Prokka|EFGINGHK_27); gnlProkkaEFGINGHK_28 (original name was: gnl|Prokka|EFGINGHK_28); gnlProkkaEFGINGHK_29 (original name was: gnl|Prokka|EFGINGHK_29); gnlProkkaEFGINGHK_30 (original name was: gnl|Prokka|EFGINGHK_30); gnlProkkaEFGINGHK_31 (original name was: gnl|Prokka|EFGINGHK_31); gnlProkkaEFGINGHK_32 (original name was: gnl|Prokka|EFGINGHK_32); gnlProkkaEFGINGHK_33 (original name was: gnl|Prokka|EFGINGHK_33); gnlProkkaEFGINGHK_34 (original name was: gnl|Prokka|EFGINGHK_34); gnlProkkaEFGINGHK_35 (original name was: gnl|Prokka|EFGINGHK_35); gnlProkkaEFGINGHK_36 (original name was: gnl|Prokka|EFGINGHK_36); gnlProkkaEFGINGHK_37 (original name was: gnl|Prokka|EFGINGHK_37); gnlProkkaEFGINGHK_38 (original name was: gnl|Prokka|EFGINGHK_38); gnlProkkaEFGINGHK_39 (original name was: gnl|Prokka|EFGINGHK_39); gnlProkkaEFGINGHK_40 (original name was: gnl|Prokka|EFGINGHK_40); gnlProkkaEFGINGHK_41 (original name was: gnl|Prokka|EFGINGHK_41); gnlProkkaEFGINGHK_42 (original name was: gnl|Prokka|EFGINGHK_42); gnlProkkaEFGINGHK_43 (original name was: gnl|Prokka|EFGINGHK_43); gnlProkkaEFGINGHK_44 (original name was: gnl|Prokka|EFGINGHK_44); gnlProkkaEFGINGHK_45 (original name was: gnl|Prokka|EFGINGHK_45); gnlProkkaEFGINGHK_46 (original name was: gnl|Prokka|EFGINGHK_46); gnlProkkaEFGINGHK_47 (original name was: gnl|Prokka|EFGINGHK_47); gnlProkkaEFGINGHK_48 (original name was: gnl|Prokka|EFGINGHK_48); gnlProkkaEFGINGHK_49 (original name was: gnl|Prokka|EFGINGHK_49); gnlProkkaEFGINGHK_50 (original name was: gnl|Prokka|EFGINGHK_50); gnlProkkaEFGINGHK_51 (original name was: gnl|Prokka|EFGINGHK_51); gnlProkkaEFGINGHK_52 (original name was: gnl|Prokka|EFGINGHK_52); gnlProkkaEFGINGHK_53 (original name was: gnl|Prokka|EFGINGHK_53); gnlProkkaEFGINGHK_54 (original name was: gnl|Prokka|EFGINGHK_54); gnlProkkaEFGINGHK_55 (original name was: gnl|Prokka|EFGINGHK_55); gnlProkkaEFGINGHK_56 (original name was: gnl|Prokka|EFGINGHK_56); gnlProkkaEFGINGHK_57 (original name was: gnl|Prokka|EFGINGHK_57); gnlProkkaEFGINGHK_58 (original name was: gnl|Prokka|EFGINGHK_58); gnlProkkaEFGINGHK_59 (original name was: gnl|Prokka|EFGINGHK_59); gnlProkkaEFGINGHK_60 (original name was: gnl|Prokka|EFGINGHK_60); gnlProkkaEFGINGHK_61 (original name was: gnl|Prokka|EFGINGHK_61); gnlProkkaEFGINGHK_62 (original name was: gnl|Prokka|EFGINGHK_62); gnlProkkaEFGINGHK_63 (original name was: gnl|Prokka|EFGINGHK_63); gnlProkkaEFGINGHK_64 (original name was: gnl|Prokka|EFGINGHK_64); gnlProkkaEFGINGHK_65 (original name was: gnl|Prokka|EFGINGHK_65); gnlProkkaEFGINGHK_66 (original name was: gnl|Prokka|EFGINGHK_66); gnlProkkaEFGINGHK_67 (original name was: gnl|Prokka|EFGINGHK_67); gnlProkkaEFGINGHK_68 (original name was: gnl|Prokka|EFGINGHK_68); gnlProkkaEFGINGHK_69 (original name was: gnl|Prokka|EFGINGHK_69); gnlProkkaEFGINGHK_70 (original name was: gnl|Prokka|EFGINGHK_70); gnlProkkaEFGINGHK_71 (original name was: gnl|Prokka|EFGINGHK_71); gnlProkkaEFGINGHK_72 (original name was: gnl|Prokka|EFGINGHK_72); gnlProkkaEFGINGHK_73 (original name was: gnl|Prokka|EFGINGHK_73); gnlProkkaEFGINGHK_74 (original name was: gnl|Prokka|EFGINGHK_74); gnlProkkaEFGINGHK_75 (original name was: gnl|Prokka|EFGINGHK_75); gnlProkkaEFGINGHK_76 (original name was: gnl|Prokka|EFGINGHK_76); gnlProkkaEFGINGHK_78 (original name was: gnl|Prokka|EFGINGHK_78); gnlProkkaEFGINGHK_79 (original name was: gnl|Prokka|EFGINGHK_79); gnlProkkaEFGINGHK_80 (original name was: gnl|Prokka|EFGINGHK_80); gnlProkkaEFGINGHK_81 (original name was: gnl|Prokka|EFGINGHK_81); gnlProkkaEFGINGHK_82 (original name was: gnl|Prokka|EFGINGHK_82); gnlProkkaEFGINGHK_83 (original name was: gnl|Prokka|EFGINGHK_83); gnlProkkaEFGINGHK_84 (original name was: gnl|Prokka|EFGINGHK_84); gnlProkkaEFGINGHK_85 (original name was: gnl|Prokka|EFGINGHK_85)

Compact view

gnlProkkaEFGINGHK_3 - Region 1 - RRE-containing

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Location: 38,443 - 58,709 nt. (total: 20,267 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEFGINGHK_22 - Region 1 - RRE-containing

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Location: 139,529 - 159,882 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEFGINGHK_77 - Region 1 - RiPP-like

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Location: 56,931 - 69,099 nt. (total: 12,169 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.