GCA_009102485.1 - 9 region(s)

Identified primary metabolite regions

c00005_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_5)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 5.1	Fumarate2succinate	SCFA	6,675	20,506	Fumarate to succinate B. thetaiotaomicron	SUC	100%

c00022_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_22)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 22.1	fatty_acids-unassigned	Putative	73,017	103,667

c00066_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_66)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 66.1	TPP_AA_metabolism	Putative	44,554	70,647

c00099_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_99)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 99.1	TPP_fatty_acids	Putative	26,123	50,982

c00110_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_110)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 110.1	Rnf_complex	E-MGC	1	16,743	Rnf complex C. sporogenes	RNF	83%

c00230_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_230)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 230.1	succinate2propionate	SCFA	1	19,850	Succinate to propionate B. theta	PRO	66%

c00244_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_244)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 244.1	PFOR_II_pathway	SCFA	1	18,582	PFOR II pathway B. thetaiotaomicron	PFORII	100%

c00250_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_250)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 250.1	Pyruvate2acetate-formate	SCFA	8,123	25,169	Pyruvate to acetate-formate B. thetaiotaomicron	PFL_acetate	100%

c00258_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_258)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 258.1	porA	SCFA	354	23,196	porA C. sporogenes	POR	60%

No primary metabolite regions were found in these records:: c00001_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_1); c00002_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_2); c00003_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_3); c00004_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_4); c00006_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_6); c00007_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_7); c00008_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_8); c00009_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_9); c00010_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_10); c00011_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_11); c00012_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_12); c00013_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_13); c00014_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_14); c00015_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_15); c00016_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_16); c00017_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_17); c00018_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_18); c00019_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_19); c00020_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_20); c00021_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_21); c00023_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_23); c00024_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_24); c00025_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_25); c00026_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_26); c00027_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_27); c00028_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_28); c00029_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_29); c00030_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_30); c00031_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_31); c00032_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_32); c00033_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_33); c00034_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_34); c00035_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_35); c00036_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_36); c00037_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_37); c00038_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_38); c00039_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_39); c00040_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_40); c00041_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_41); c00042_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_42); c00043_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_43); c00044_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_44); c00045_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_45); c00046_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_46); c00047_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_47); c00048_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_48); c00049_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_49); c00050_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_50); c00051_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_51); c00052_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_52); c00053_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_53); c00054_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_54); c00055_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_55); c00056_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_56); c00057_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_57); c00058_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_58); c00059_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_59); c00060_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_60); c00061_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_61); c00062_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_62); c00063_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_63); c00064_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_64); c00065_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_65); c00067_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_67); c00068_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_68); c00069_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_69); c00070_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_70); c00071_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_71); c00072_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_72); c00073_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_73); c00074_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_74); c00075_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_75); c00076_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_76); c00077_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_77); c00078_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_78); c00079_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_79); c00080_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_80); c00081_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_81); c00082_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_82); c00083_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_83); c00084_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_84); c00085_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_85); c00086_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_86); c00087_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_87); c00088_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_88); c00089_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_89); c00090_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_90); c00091_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_91); c00092_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_92); c00093_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_93); c00094_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_94); c00095_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_95); c00096_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_96); c00097_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_97); c00098_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_98); c00100_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_100); c00101_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_101); c00102_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_102); c00103_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_103); c00104_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_104); c00105_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_105); c00106_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_106); c00107_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_107); c00108_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_108); c00109_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_109); c00111_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_111); c00112_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_112); c00113_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_113); c00114_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_114); c00115_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_115); c00116_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_116); c00117_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_117); c00118_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_118); c00119_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_119); c00120_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_120); c00121_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_121); c00122_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_122); c00123_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_123); c00124_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_124); c00125_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_125); c00126_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_126); c00127_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_127); c00128_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_128); c00129_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_129); c00130_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_130); c00131_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_131); c00132_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_132); c00133_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_133); c00134_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_134); c00135_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_135); c00136_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_136); c00137_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_137); c00138_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_138); c00139_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_139); c00140_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_140); c00141_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_141); c00142_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_142); c00143_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_143); c00144_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_144); c00145_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_145); c00146_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_146); c00147_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_147); c00148_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_148); c00149_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_149); c00150_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_150); c00151_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_151); c00152_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_152); c00153_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_153); c00154_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_154); c00155_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_155); c00156_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_156); c00157_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_157); c00158_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_158); c00159_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_159); c00160_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_160); c00161_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_161); c00162_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_162); c00163_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_163); c00164_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_164); c00165_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_165); c00166_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_166); c00167_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_167); c00168_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_168); c00169_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_169); c00170_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_170); c00171_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_171); c00172_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_172); c00173_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_173); c00174_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_174); c00175_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_175); c00176_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_176); c00177_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_177); c00178_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_178); c00179_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_179); c00180_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_180); c00181_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_181); c00182_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_182); c00183_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_183); c00184_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_184); c00185_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_185); c00186_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_186); c00187_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_187); c00188_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_188); c00189_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_189); c00190_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_190); c00191_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_191); c00192_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_192); c00193_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_193); c00194_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_194); c00195_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_195); c00196_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_196); c00197_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_197); c00198_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_198); c00199_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_199); c00200_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_200); c00201_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_201); c00202_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_202); c00203_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_203); c00204_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_204); c00205_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_205); c00206_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_206); c00207_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_207); c00208_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_208); c00209_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_209); c00210_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_210); c00211_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_211); c00212_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_212); c00213_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_213); c00214_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_214); c00215_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_215); c00216_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_216); c00217_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_217); c00218_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_218); c00219_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_219); c00220_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_220); c00221_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_221); c00222_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_222); c00223_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_223); c00224_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_224); c00225_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_225); c00226_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_226); c00227_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_227); c00228_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_228); c00229_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_229); c00231_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_231); c00232_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_232); c00233_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_233); c00234_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_234); c00235_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_235); c00236_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_236); c00237_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_237); c00238_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_238); c00239_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_239); c00240_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_240); c00241_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_241); c00242_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_242); c00243_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_243); c00245_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_245); c00246_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_246); c00247_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_247); c00248_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_248); c00249_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_249); c00251_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_251); c00252_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_252); c00253_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_253); c00254_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_254); c00255_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_255); c00256_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_256); c00257_gnlPro.. (original name was: gnl|Prokka|HLNBPCGI_257)

Compact view

c00005_gnlPro.. - Region 1 - Fumarate2succinate

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Location: 6,675 - 20,506 nt. (total: 13,832 nt) Show pHMM detection rules used

Region on contig edge.

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00022_gnlPro.. - Region 1 - fatty_acids-unassigned

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Location: 73,017 - 103,667 nt. (total: 30,651 nt) Show pHMM detection rules used

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00066_gnlPro.. - Region 1 - TPP_AA_metabolism

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Location: 44,554 - 70,647 nt. (total: 26,094 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

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transport-related genes

regulatory genes

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c00099_gnlPro.. - Region 1 - TPP_fatty_acids

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Location: 26,123 - 50,982 nt. (total: 24,860 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

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c00110_gnlPro.. - Region 1 - Rnf_complex

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Location: 1 - 16,743 nt. (total: 16,743 nt) Show pHMM detection rules used

Region on contig edge.

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

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c00230_gnlPro.. - Region 1 - succinate2propionate

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Location: 1 - 19,850 nt. (total: 19,850 nt) Show pHMM detection rules used

Region on contig edge.

succinate2propionate: (minimum(4, [AcetylCoA_hyd_C, AcetylCoA_hydro, B12-binding, Biotin_lipoyl, Glyoxalase_4, HMGL-like, MM_CoA_mutase, MeaB, OAD_beta, OAD_gamma, PYC_OADA]) and minimum(1, [CT_Btheta, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, CT_Vparvula]) and not Cytidylate_kin)

Legend:

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c00244_gnlPro.. - Region 1 - PFOR_II_pathway

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Location: 1 - 18,582 nt. (total: 18,582 nt) Show pHMM detection rules used

Region on contig edge.

PFOR_II_pathway: cds(POR and POR_N and PFOR_II and EKR and Fer4_16 and TPP_enzyme_C)

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c00250_gnlPro.. - Region 1 - Pyruvate2acetate-formate

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Location: 8,123 - 25,169 nt. (total: 17,047 nt) Show pHMM detection rules used

Region on contig edge.

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

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c00258_gnlPro.. - Region 1 - porA

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Location: 354 - 23,196 nt. (total: 22,843 nt) Show pHMM detection rules used

porA: (Fer4_7 and TPP_enzyme_C and POR and POR_N and PFOR_II and not (EKR or Fer4_16))

Legend:

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