GCA_009102805.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFMJJFIOC_4 (original name was: gnl|Prokka|FMJJFIOC_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	arylpolyene	58,494	106,276	flexirubin	Other	48%

gnlProkkaFMJJFIOC_36 (original name was: gnl|Prokka|FMJJFIOC_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	RRE-containing	32,533	47,748

No secondary metabolite regions were found in these records:: gnlProkkaFMJJFIOC_1 (original name was: gnl|Prokka|FMJJFIOC_1); gnlProkkaFMJJFIOC_2 (original name was: gnl|Prokka|FMJJFIOC_2); gnlProkkaFMJJFIOC_3 (original name was: gnl|Prokka|FMJJFIOC_3); gnlProkkaFMJJFIOC_5 (original name was: gnl|Prokka|FMJJFIOC_5); gnlProkkaFMJJFIOC_6 (original name was: gnl|Prokka|FMJJFIOC_6); gnlProkkaFMJJFIOC_7 (original name was: gnl|Prokka|FMJJFIOC_7); gnlProkkaFMJJFIOC_8 (original name was: gnl|Prokka|FMJJFIOC_8); gnlProkkaFMJJFIOC_9 (original name was: gnl|Prokka|FMJJFIOC_9); gnlProkkaFMJJFIOC_10 (original name was: gnl|Prokka|FMJJFIOC_10); gnlProkkaFMJJFIOC_11 (original name was: gnl|Prokka|FMJJFIOC_11); gnlProkkaFMJJFIOC_12 (original name was: gnl|Prokka|FMJJFIOC_12); gnlProkkaFMJJFIOC_13 (original name was: gnl|Prokka|FMJJFIOC_13); gnlProkkaFMJJFIOC_14 (original name was: gnl|Prokka|FMJJFIOC_14); gnlProkkaFMJJFIOC_15 (original name was: gnl|Prokka|FMJJFIOC_15); gnlProkkaFMJJFIOC_16 (original name was: gnl|Prokka|FMJJFIOC_16); gnlProkkaFMJJFIOC_17 (original name was: gnl|Prokka|FMJJFIOC_17); gnlProkkaFMJJFIOC_18 (original name was: gnl|Prokka|FMJJFIOC_18); gnlProkkaFMJJFIOC_19 (original name was: gnl|Prokka|FMJJFIOC_19); gnlProkkaFMJJFIOC_20 (original name was: gnl|Prokka|FMJJFIOC_20); gnlProkkaFMJJFIOC_21 (original name was: gnl|Prokka|FMJJFIOC_21); gnlProkkaFMJJFIOC_22 (original name was: gnl|Prokka|FMJJFIOC_22); gnlProkkaFMJJFIOC_23 (original name was: gnl|Prokka|FMJJFIOC_23); gnlProkkaFMJJFIOC_24 (original name was: gnl|Prokka|FMJJFIOC_24); gnlProkkaFMJJFIOC_25 (original name was: gnl|Prokka|FMJJFIOC_25); gnlProkkaFMJJFIOC_26 (original name was: gnl|Prokka|FMJJFIOC_26); gnlProkkaFMJJFIOC_27 (original name was: gnl|Prokka|FMJJFIOC_27); gnlProkkaFMJJFIOC_28 (original name was: gnl|Prokka|FMJJFIOC_28); gnlProkkaFMJJFIOC_29 (original name was: gnl|Prokka|FMJJFIOC_29); gnlProkkaFMJJFIOC_30 (original name was: gnl|Prokka|FMJJFIOC_30); gnlProkkaFMJJFIOC_31 (original name was: gnl|Prokka|FMJJFIOC_31); gnlProkkaFMJJFIOC_32 (original name was: gnl|Prokka|FMJJFIOC_32); gnlProkkaFMJJFIOC_33 (original name was: gnl|Prokka|FMJJFIOC_33); gnlProkkaFMJJFIOC_34 (original name was: gnl|Prokka|FMJJFIOC_34); gnlProkkaFMJJFIOC_35 (original name was: gnl|Prokka|FMJJFIOC_35); gnlProkkaFMJJFIOC_37 (original name was: gnl|Prokka|FMJJFIOC_37); gnlProkkaFMJJFIOC_38 (original name was: gnl|Prokka|FMJJFIOC_38); gnlProkkaFMJJFIOC_39 (original name was: gnl|Prokka|FMJJFIOC_39); gnlProkkaFMJJFIOC_40 (original name was: gnl|Prokka|FMJJFIOC_40); gnlProkkaFMJJFIOC_41 (original name was: gnl|Prokka|FMJJFIOC_41); gnlProkkaFMJJFIOC_42 (original name was: gnl|Prokka|FMJJFIOC_42); gnlProkkaFMJJFIOC_43 (original name was: gnl|Prokka|FMJJFIOC_43); gnlProkkaFMJJFIOC_44 (original name was: gnl|Prokka|FMJJFIOC_44); gnlProkkaFMJJFIOC_45 (original name was: gnl|Prokka|FMJJFIOC_45); gnlProkkaFMJJFIOC_46 (original name was: gnl|Prokka|FMJJFIOC_46); gnlProkkaFMJJFIOC_47 (original name was: gnl|Prokka|FMJJFIOC_47); gnlProkkaFMJJFIOC_48 (original name was: gnl|Prokka|FMJJFIOC_48); gnlProkkaFMJJFIOC_49 (original name was: gnl|Prokka|FMJJFIOC_49); gnlProkkaFMJJFIOC_50 (original name was: gnl|Prokka|FMJJFIOC_50); gnlProkkaFMJJFIOC_51 (original name was: gnl|Prokka|FMJJFIOC_51); gnlProkkaFMJJFIOC_52 (original name was: gnl|Prokka|FMJJFIOC_52); gnlProkkaFMJJFIOC_53 (original name was: gnl|Prokka|FMJJFIOC_53); gnlProkkaFMJJFIOC_54 (original name was: gnl|Prokka|FMJJFIOC_54); gnlProkkaFMJJFIOC_55 (original name was: gnl|Prokka|FMJJFIOC_55); gnlProkkaFMJJFIOC_56 (original name was: gnl|Prokka|FMJJFIOC_56); gnlProkkaFMJJFIOC_57 (original name was: gnl|Prokka|FMJJFIOC_57); gnlProkkaFMJJFIOC_58 (original name was: gnl|Prokka|FMJJFIOC_58); gnlProkkaFMJJFIOC_59 (original name was: gnl|Prokka|FMJJFIOC_59); gnlProkkaFMJJFIOC_60 (original name was: gnl|Prokka|FMJJFIOC_60); gnlProkkaFMJJFIOC_61 (original name was: gnl|Prokka|FMJJFIOC_61); gnlProkkaFMJJFIOC_62 (original name was: gnl|Prokka|FMJJFIOC_62); gnlProkkaFMJJFIOC_63 (original name was: gnl|Prokka|FMJJFIOC_63); gnlProkkaFMJJFIOC_64 (original name was: gnl|Prokka|FMJJFIOC_64); gnlProkkaFMJJFIOC_65 (original name was: gnl|Prokka|FMJJFIOC_65); gnlProkkaFMJJFIOC_66 (original name was: gnl|Prokka|FMJJFIOC_66); gnlProkkaFMJJFIOC_67 (original name was: gnl|Prokka|FMJJFIOC_67); gnlProkkaFMJJFIOC_68 (original name was: gnl|Prokka|FMJJFIOC_68); gnlProkkaFMJJFIOC_69 (original name was: gnl|Prokka|FMJJFIOC_69); gnlProkkaFMJJFIOC_70 (original name was: gnl|Prokka|FMJJFIOC_70); gnlProkkaFMJJFIOC_71 (original name was: gnl|Prokka|FMJJFIOC_71); gnlProkkaFMJJFIOC_72 (original name was: gnl|Prokka|FMJJFIOC_72); gnlProkkaFMJJFIOC_73 (original name was: gnl|Prokka|FMJJFIOC_73); gnlProkkaFMJJFIOC_74 (original name was: gnl|Prokka|FMJJFIOC_74); gnlProkkaFMJJFIOC_75 (original name was: gnl|Prokka|FMJJFIOC_75); gnlProkkaFMJJFIOC_76 (original name was: gnl|Prokka|FMJJFIOC_76); gnlProkkaFMJJFIOC_77 (original name was: gnl|Prokka|FMJJFIOC_77); gnlProkkaFMJJFIOC_78 (original name was: gnl|Prokka|FMJJFIOC_78); gnlProkkaFMJJFIOC_79 (original name was: gnl|Prokka|FMJJFIOC_79); gnlProkkaFMJJFIOC_80 (original name was: gnl|Prokka|FMJJFIOC_80); gnlProkkaFMJJFIOC_81 (original name was: gnl|Prokka|FMJJFIOC_81); gnlProkkaFMJJFIOC_82 (original name was: gnl|Prokka|FMJJFIOC_82); gnlProkkaFMJJFIOC_83 (original name was: gnl|Prokka|FMJJFIOC_83); gnlProkkaFMJJFIOC_84 (original name was: gnl|Prokka|FMJJFIOC_84); gnlProkkaFMJJFIOC_85 (original name was: gnl|Prokka|FMJJFIOC_85); gnlProkkaFMJJFIOC_86 (original name was: gnl|Prokka|FMJJFIOC_86); gnlProkkaFMJJFIOC_87 (original name was: gnl|Prokka|FMJJFIOC_87); gnlProkkaFMJJFIOC_88 (original name was: gnl|Prokka|FMJJFIOC_88); gnlProkkaFMJJFIOC_89 (original name was: gnl|Prokka|FMJJFIOC_89); gnlProkkaFMJJFIOC_90 (original name was: gnl|Prokka|FMJJFIOC_90); gnlProkkaFMJJFIOC_91 (original name was: gnl|Prokka|FMJJFIOC_91); gnlProkkaFMJJFIOC_92 (original name was: gnl|Prokka|FMJJFIOC_92)

Compact view

gnlProkkaFMJJFIOC_4 - Region 1 - arylpolyene

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Location: 58,494 - 106,276 nt. (total: 47,783 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg4_73

AMP-binding (55..290): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaFMJJFIOC_36 - Region 1 - RRE-containing

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Location: 32,533 - 47,748 nt. (total: 15,216 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.