GCA_009677135.1 - 6 region(s)

Identified primary metabolite regions

c00046_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_46)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 46.1	Fumarate2succinate	SCFA	95,815	112,866	Fumarate to succinate B. thetaiotaomicron	SUC	100%

c00047_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_47)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 47.1	Rnf_complex	E-MGC	15,440	40,527	Rnf complex C. sporogenes	RNF	83%

c00058_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_58)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 58.1	Pyruvate2acetate-formate	SCFA	37,400	60,379	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

c00060_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_60)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 60.1	porA	SCFA	8,301	31,146	porA C. sporogenes	POR	60%

c00065_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_65)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 65.1	TPP_AA_metabolism	Putative	3,200	29,182

c00075_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_75)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 75.1	PFOR_II_pathway	SCFA	464	24,021	PFOR II pathway B. thetaiotaomicron	PFORII	100%

No primary metabolite regions were found in these records:: c00001_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_1); c00002_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_2); c00003_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_3); c00004_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_4); c00005_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_5); c00006_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_6); c00007_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_7); c00008_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_8); c00009_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_9); c00010_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_10); c00011_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_11); c00012_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_12); c00013_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_13); c00014_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_14); c00015_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_15); c00016_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_16); c00017_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_17); c00018_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_18); c00019_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_19); c00020_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_20); c00021_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_21); c00022_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_22); c00023_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_23); c00024_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_24); c00025_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_25); c00026_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_26); c00027_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_27); c00028_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_28); c00029_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_29); c00030_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_30); c00031_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_31); c00032_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_32); c00033_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_33); c00034_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_34); c00035_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_35); c00036_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_36); c00037_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_37); c00038_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_38); c00039_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_39); c00040_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_40); c00041_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_41); c00042_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_42); c00043_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_43); c00044_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_44); c00045_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_45); c00048_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_48); c00049_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_49); c00050_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_50); c00051_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_51); c00052_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_52); c00053_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_53); c00054_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_54); c00055_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_55); c00056_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_56); c00057_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_57); c00059_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_59); c00061_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_61); c00062_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_62); c00063_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_63); c00064_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_64); c00066_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_66); c00067_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_67); c00068_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_68); c00069_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_69); c00070_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_70); c00071_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_71); c00072_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_72); c00073_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_73); c00074_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_74); c00076_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_76); c00077_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_77); c00078_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_78); c00079_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_79); c00080_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_80); c00081_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_81); c00082_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_82); c00083_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_83); c00084_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_84); c00085_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_85); c00086_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_86); c00087_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_87); c00088_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_88); c00089_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_89); c00090_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_90); c00091_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_91); c00092_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_92); c00093_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_93); c00094_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_94); c00095_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_95); c00096_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_96); c00097_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_97); c00098_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_98); c00099_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_99); c00100_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_100); c00101_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_101); c00102_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_102); c00103_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_103); c00104_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_104); c00105_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_105); c00106_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_106); c00107_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_107); c00108_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_108); c00109_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_109); c00110_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_110); c00111_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_111); c00112_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_112); c00113_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_113); c00114_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_114); c00115_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_115); c00116_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_116); c00117_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_117); c00118_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_118); c00119_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_119); c00120_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_120); c00121_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_121); c00122_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_122); c00123_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_123); c00124_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_124); c00125_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_125); c00126_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_126); c00127_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_127); c00128_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_128); c00129_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_129); c00130_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_130); c00131_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_131); c00132_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_132); c00133_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_133); c00134_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_134); c00135_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_135); c00136_gnlPro.. (original name was: gnl|Prokka|ODHOOABH_136)

Compact view

c00046_gnlPro.. - Region 1 - Fumarate2succinate

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Location: 95,815 - 112,866 nt. (total: 17,052 nt) Show pHMM detection rules used

Region on contig edge.

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

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KnownClusterBlast

Similar known gene clusters

c00047_gnlPro.. - Region 1 - Rnf_complex

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Location: 15,440 - 40,527 nt. (total: 25,088 nt) Show pHMM detection rules used

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00058_gnlPro.. - Region 1 - Pyruvate2acetate-formate

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Location: 37,400 - 60,379 nt. (total: 22,980 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00060_gnlPro.. - Region 1 - porA

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Location: 8,301 - 31,146 nt. (total: 22,846 nt) Show pHMM detection rules used

porA: (Fer4_7 and TPP_enzyme_C and POR and POR_N and PFOR_II and not (EKR or Fer4_16))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00065_gnlPro.. - Region 1 - TPP_AA_metabolism

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Location: 3,200 - 29,182 nt. (total: 25,983 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00075_gnlPro.. - Region 1 - PFOR_II_pathway

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Location: 464 - 24,021 nt. (total: 23,558 nt) Show pHMM detection rules used

PFOR_II_pathway: cds(POR and POR_N and PFOR_II and EKR and Fer4_16 and TPP_enzyme_C)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters