GCA_009678695.1 - 8 region(s)

Identified primary metabolite regions

c00011_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_11)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 11.1	TPP_fatty_acids	Putative	152,134	176,991

c00066_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_66)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 66.1	Pyruvate2acetate-formate	SCFA	5,352	28,327	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

c00176_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_176)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 176.1	porA	SCFA	21,845	44,680	porA C. sporogenes	POR	60%

c00179_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_179)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 179.1	OD_unknown	Putative	1	22,504

c00180_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_180)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 180.1	TPP_AA_metabolism	Putative	278,495	302,445

c00191_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_191)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 191.1	succinate2propionate	SCFA	246,332	270,860	Succinate to propionate B. theta	PRO	50%

c00202_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_202)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 202.1	Rnf_complex	E-MGC	182,201	207,261	Rnf complex C. sporogenes	RNF	83%

c00213_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_213)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 213.1	Fumarate2succinate	SCFA	51,292	74,762	Fumarate to succinate B. thetaiotaomicron	SUC	100%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 11.1	TPP_fatty_acids	Putative	152,134	176,991
Region 66.1	Pyruvate2acetate-formate	SCFA	5,352	28,327	Pyruvate to acetate-formate E. coli	PFL_acetate	100%
Region 176.1	porA	SCFA	21,845	44,680	porA C. sporogenes	POR	60%
Region 179.1	OD_unknown	Putative	1	22,504
Region 180.1	TPP_AA_metabolism	Putative	278,495	302,445
Region 191.1	succinate2propionate	SCFA	246,332	270,860	Succinate to propionate B. theta	PRO	50%
Region 202.1	Rnf_complex	E-MGC	182,201	207,261	Rnf complex C. sporogenes	RNF	83%
Region 213.1	Fumarate2succinate	SCFA	51,292	74,762	Fumarate to succinate B. thetaiotaomicron	SUC	100%

No primary metabolite regions were found in these records:: c00001_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_1); c00002_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_2); c00003_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_3); c00004_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_4); c00005_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_5); c00006_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_6); c00007_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_7); c00008_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_8); c00009_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_9); c00010_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_10); c00012_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_12); c00013_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_13); c00014_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_14); c00015_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_15); c00016_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_16); c00017_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_17); c00018_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_18); c00019_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_19); c00020_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_20); c00021_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_21); c00022_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_22); c00023_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_23); c00024_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_24); c00025_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_25); c00026_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_26); c00027_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_27); c00028_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_28); c00029_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_29); c00030_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_30); c00031_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_31); c00032_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_32); c00033_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_33); c00034_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_34); c00035_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_35); c00036_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_36); c00037_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_37); c00038_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_38); c00039_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_39); c00040_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_40); c00041_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_41); c00042_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_42); c00043_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_43); c00044_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_44); c00045_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_45); c00046_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_46); c00047_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_47); c00048_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_48); c00049_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_49); c00050_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_50); c00051_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_51); c00052_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_52); c00053_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_53); c00054_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_54); c00055_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_55); c00056_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_56); c00057_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_57); c00058_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_58); c00059_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_59); c00060_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_60); c00061_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_61); c00062_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_62); c00063_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_63); c00064_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_64); c00065_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_65); c00067_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_67); c00068_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_68); c00069_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_69); c00070_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_70); c00071_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_71); c00072_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_72); c00073_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_73); c00074_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_74); c00075_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_75); c00076_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_76); c00077_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_77); c00078_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_78); c00079_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_79); c00080_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_80); c00081_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_81); c00082_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_82); c00083_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_83); c00084_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_84); c00085_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_85); c00086_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_86); c00087_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_87); c00088_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_88); c00089_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_89); c00090_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_90); c00091_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_91); c00092_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_92); c00093_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_93); c00094_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_94); c00095_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_95); c00096_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_96); c00097_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_97); c00098_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_98); c00099_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_99); c00100_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_100); c00101_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_101); c00102_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_102); c00103_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_103); c00104_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_104); c00105_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_105); c00106_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_106); c00107_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_107); c00108_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_108); c00109_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_109); c00110_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_110); c00111_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_111); c00112_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_112); c00113_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_113); c00114_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_114); c00115_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_115); c00116_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_116); c00117_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_117); c00118_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_118); c00119_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_119); c00120_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_120); c00121_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_121); c00122_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_122); c00123_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_123); c00124_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_124); c00125_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_125); c00126_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_126); c00127_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_127); c00128_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_128); c00129_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_129); c00130_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_130); c00131_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_131); c00132_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_132); c00133_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_133); c00134_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_134); c00135_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_135); c00136_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_136); c00137_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_137); c00138_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_138); c00139_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_139); c00140_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_140); c00141_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_141); c00142_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_142); c00143_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_143); c00144_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_144); c00145_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_145); c00146_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_146); c00147_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_147); c00148_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_148); c00149_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_149); c00150_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_150); c00151_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_151); c00152_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_152); c00153_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_153); c00154_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_154); c00155_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_155); c00156_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_156); c00157_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_157); c00158_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_158); c00159_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_159); c00160_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_160); c00161_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_161); c00162_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_162); c00163_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_163); c00164_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_164); c00165_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_165); c00166_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_166); c00167_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_167); c00168_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_168); c00169_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_169); c00170_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_170); c00171_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_171); c00172_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_172); c00173_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_173); c00174_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_174); c00175_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_175); c00177_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_177); c00178_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_178); c00181_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_181); c00182_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_182); c00183_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_183); c00184_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_184); c00185_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_185); c00186_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_186); c00187_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_187); c00188_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_188); c00189_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_189); c00190_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_190); c00192_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_192); c00193_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_193); c00194_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_194); c00195_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_195); c00196_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_196); c00197_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_197); c00198_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_198); c00199_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_199); c00200_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_200); c00201_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_201); c00203_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_203); c00204_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_204); c00205_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_205); c00206_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_206); c00207_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_207); c00208_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_208); c00209_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_209); c00210_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_210); c00211_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_211); c00212_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_212); c00214_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_214); c00215_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_215); c00216_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_216); c00217_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_217); c00218_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_218); c00219_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_219); c00220_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_220); c00221_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_221); c00222_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_222); c00223_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_223); c00224_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_224); c00225_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_225); c00226_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_226); c00227_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_227); c00228_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_228); c00229_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_229); c00230_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_230); c00231_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_231); c00232_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_232); c00233_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_233); c00234_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_234); c00235_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_235); c00236_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_236); c00237_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_237); c00238_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_238); c00239_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_239); c00240_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_240); c00241_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_241); c00242_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_242); c00243_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_243); c00244_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_244); c00245_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_245); c00246_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_246); c00247_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_247); c00248_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_248); c00249_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_249); c00250_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_250); c00251_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_251); c00252_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_252); c00253_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_253); c00254_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_254); c00255_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_255); c00256_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_256); c00257_gnlPro.. (original name was: gnl|Prokka|HEGIJPHM_257)

Compact view

c00011_gnlPro.. - Region 1 - TPP_fatty_acids

Download region GenBank file

Location: 152,134 - 176,991 nt. (total: 24,858 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

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c00066_gnlPro.. - Region 1 - Pyruvate2acetate-formate

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Location: 5,352 - 28,327 nt. (total: 22,976 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

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c00176_gnlPro.. - Region 1 - porA

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Location: 21,845 - 44,680 nt. (total: 22,836 nt) Show pHMM detection rules used

porA: (Fer4_7 and TPP_enzyme_C and POR and POR_N and PFOR_II and not (EKR or Fer4_16))

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c00179_gnlPro.. - Region 1 - OD_unknown

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Location: 1 - 22,504 nt. (total: 22,504 nt) Show pHMM detection rules used

Region on contig edge.

OD_unknown: (minimum(1, [PFOR_II, POR, POR_N]) and minimum(2, [CoA_binding, CoA_binding_2, Ligase_CoA, PTAC, Succ_CoA_lig]) and not (Gly_radical_scatole or Gly_radical or Gly_430_pcre or Gly_8-9_TMA))

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c00180_gnlPro.. - Region 1 - TPP_AA_metabolism

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Location: 278,495 - 302,445 nt. (total: 23,951 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

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c00191_gnlPro.. - Region 1 - succinate2propionate

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Location: 246,332 - 270,860 nt. (total: 24,529 nt) Show pHMM detection rules used

succinate2propionate: (minimum(4, [AcetylCoA_hyd_C, AcetylCoA_hydro, B12-binding, Biotin_lipoyl, Glyoxalase_4, HMGL-like, MM_CoA_mutase, MeaB, OAD_beta, OAD_gamma, PYC_OADA]) and minimum(1, [CT_Btheta, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, CT_Vparvula]) and not Cytidylate_kin)

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c00202_gnlPro.. - Region 1 - Rnf_complex

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Location: 182,201 - 207,261 nt. (total: 25,061 nt) Show pHMM detection rules used

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

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c00213_gnlPro.. - Region 1 - Fumarate2succinate

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Location: 51,292 - 74,762 nt. (total: 23,471 nt) Show pHMM detection rules used

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

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