GCA_009679405.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIOFPBDMD_3 (original name was: gnl|Prokka|IOFPBDMD_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	81,133	87,785

gnlProkkaIOFPBDMD_11 (original name was: gnl|Prokka|IOFPBDMD_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	272,761	313,933

gnlProkkaIOFPBDMD_31 (original name was: gnl|Prokka|IOFPBDMD_31)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	RiPP-like	1,290	11,475

Region	Type	From	To	Similarity
Region 3.1	RiPP-like	81,133	87,785
Region 11.1	T3PKS	272,761	313,933
Region 31.1	RiPP-like	1,290	11,475

No secondary metabolite regions were found in these records:: gnlProkkaIOFPBDMD_1 (original name was: gnl|Prokka|IOFPBDMD_1); gnlProkkaIOFPBDMD_2 (original name was: gnl|Prokka|IOFPBDMD_2); gnlProkkaIOFPBDMD_4 (original name was: gnl|Prokka|IOFPBDMD_4); gnlProkkaIOFPBDMD_5 (original name was: gnl|Prokka|IOFPBDMD_5); gnlProkkaIOFPBDMD_6 (original name was: gnl|Prokka|IOFPBDMD_6); gnlProkkaIOFPBDMD_7 (original name was: gnl|Prokka|IOFPBDMD_7); gnlProkkaIOFPBDMD_8 (original name was: gnl|Prokka|IOFPBDMD_8); gnlProkkaIOFPBDMD_9 (original name was: gnl|Prokka|IOFPBDMD_9); gnlProkkaIOFPBDMD_10 (original name was: gnl|Prokka|IOFPBDMD_10); gnlProkkaIOFPBDMD_12 (original name was: gnl|Prokka|IOFPBDMD_12); gnlProkkaIOFPBDMD_13 (original name was: gnl|Prokka|IOFPBDMD_13); gnlProkkaIOFPBDMD_14 (original name was: gnl|Prokka|IOFPBDMD_14); gnlProkkaIOFPBDMD_15 (original name was: gnl|Prokka|IOFPBDMD_15); gnlProkkaIOFPBDMD_16 (original name was: gnl|Prokka|IOFPBDMD_16); gnlProkkaIOFPBDMD_17 (original name was: gnl|Prokka|IOFPBDMD_17); gnlProkkaIOFPBDMD_18 (original name was: gnl|Prokka|IOFPBDMD_18); gnlProkkaIOFPBDMD_19 (original name was: gnl|Prokka|IOFPBDMD_19); gnlProkkaIOFPBDMD_20 (original name was: gnl|Prokka|IOFPBDMD_20); gnlProkkaIOFPBDMD_21 (original name was: gnl|Prokka|IOFPBDMD_21); gnlProkkaIOFPBDMD_22 (original name was: gnl|Prokka|IOFPBDMD_22); gnlProkkaIOFPBDMD_23 (original name was: gnl|Prokka|IOFPBDMD_23); gnlProkkaIOFPBDMD_24 (original name was: gnl|Prokka|IOFPBDMD_24); gnlProkkaIOFPBDMD_25 (original name was: gnl|Prokka|IOFPBDMD_25); gnlProkkaIOFPBDMD_26 (original name was: gnl|Prokka|IOFPBDMD_26); gnlProkkaIOFPBDMD_27 (original name was: gnl|Prokka|IOFPBDMD_27); gnlProkkaIOFPBDMD_28 (original name was: gnl|Prokka|IOFPBDMD_28); gnlProkkaIOFPBDMD_29 (original name was: gnl|Prokka|IOFPBDMD_29); gnlProkkaIOFPBDMD_30 (original name was: gnl|Prokka|IOFPBDMD_30)

Compact view

gnlProkkaIOFPBDMD_3 - Region 1 - RiPP-like

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Location: 81,133 - 87,785 nt. (total: 6,653 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIOFPBDMD_11 - Region 1 - T3PKS

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Location: 272,761 - 313,933 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIOFPBDMD_31 - Region 1 - RiPP-like

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Location: 1,290 - 11,475 nt. (total: 10,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.