GCA_009679505.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGHEHJLEB_31 (original name was: gnl|Prokka|GHEHJLEB_31)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	RiPP-like	1	5,787

gnlProkkaGHEHJLEB_36 (original name was: gnl|Prokka|GHEHJLEB_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	RiPP-like	9,905	16,180

gnlProkkaGHEHJLEB_40 (original name was: gnl|Prokka|GHEHJLEB_40)

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	RiPP-like	1	7,455

Region	Type	From	To	Similarity
Region 31.1	RiPP-like	1	5,787
Region 36.1	RiPP-like	9,905	16,180
Region 40.1	RiPP-like	1	7,455

No secondary metabolite regions were found in these records:: gnlProkkaGHEHJLEB_1 (original name was: gnl|Prokka|GHEHJLEB_1); gnlProkkaGHEHJLEB_2 (original name was: gnl|Prokka|GHEHJLEB_2); gnlProkkaGHEHJLEB_3 (original name was: gnl|Prokka|GHEHJLEB_3); gnlProkkaGHEHJLEB_4 (original name was: gnl|Prokka|GHEHJLEB_4); gnlProkkaGHEHJLEB_5 (original name was: gnl|Prokka|GHEHJLEB_5); gnlProkkaGHEHJLEB_6 (original name was: gnl|Prokka|GHEHJLEB_6); gnlProkkaGHEHJLEB_7 (original name was: gnl|Prokka|GHEHJLEB_7); gnlProkkaGHEHJLEB_8 (original name was: gnl|Prokka|GHEHJLEB_8); gnlProkkaGHEHJLEB_9 (original name was: gnl|Prokka|GHEHJLEB_9); gnlProkkaGHEHJLEB_10 (original name was: gnl|Prokka|GHEHJLEB_10); gnlProkkaGHEHJLEB_11 (original name was: gnl|Prokka|GHEHJLEB_11); gnlProkkaGHEHJLEB_12 (original name was: gnl|Prokka|GHEHJLEB_12); gnlProkkaGHEHJLEB_13 (original name was: gnl|Prokka|GHEHJLEB_13); gnlProkkaGHEHJLEB_14 (original name was: gnl|Prokka|GHEHJLEB_14); gnlProkkaGHEHJLEB_15 (original name was: gnl|Prokka|GHEHJLEB_15); gnlProkkaGHEHJLEB_16 (original name was: gnl|Prokka|GHEHJLEB_16); gnlProkkaGHEHJLEB_17 (original name was: gnl|Prokka|GHEHJLEB_17); gnlProkkaGHEHJLEB_18 (original name was: gnl|Prokka|GHEHJLEB_18); gnlProkkaGHEHJLEB_19 (original name was: gnl|Prokka|GHEHJLEB_19); gnlProkkaGHEHJLEB_20 (original name was: gnl|Prokka|GHEHJLEB_20); gnlProkkaGHEHJLEB_21 (original name was: gnl|Prokka|GHEHJLEB_21); gnlProkkaGHEHJLEB_22 (original name was: gnl|Prokka|GHEHJLEB_22); gnlProkkaGHEHJLEB_23 (original name was: gnl|Prokka|GHEHJLEB_23); gnlProkkaGHEHJLEB_24 (original name was: gnl|Prokka|GHEHJLEB_24); gnlProkkaGHEHJLEB_25 (original name was: gnl|Prokka|GHEHJLEB_25); gnlProkkaGHEHJLEB_26 (original name was: gnl|Prokka|GHEHJLEB_26); gnlProkkaGHEHJLEB_27 (original name was: gnl|Prokka|GHEHJLEB_27); gnlProkkaGHEHJLEB_28 (original name was: gnl|Prokka|GHEHJLEB_28); gnlProkkaGHEHJLEB_29 (original name was: gnl|Prokka|GHEHJLEB_29); gnlProkkaGHEHJLEB_30 (original name was: gnl|Prokka|GHEHJLEB_30); gnlProkkaGHEHJLEB_32 (original name was: gnl|Prokka|GHEHJLEB_32); gnlProkkaGHEHJLEB_33 (original name was: gnl|Prokka|GHEHJLEB_33); gnlProkkaGHEHJLEB_34 (original name was: gnl|Prokka|GHEHJLEB_34); gnlProkkaGHEHJLEB_35 (original name was: gnl|Prokka|GHEHJLEB_35); gnlProkkaGHEHJLEB_37 (original name was: gnl|Prokka|GHEHJLEB_37); gnlProkkaGHEHJLEB_38 (original name was: gnl|Prokka|GHEHJLEB_38); gnlProkkaGHEHJLEB_39 (original name was: gnl|Prokka|GHEHJLEB_39); gnlProkkaGHEHJLEB_41 (original name was: gnl|Prokka|GHEHJLEB_41); gnlProkkaGHEHJLEB_42 (original name was: gnl|Prokka|GHEHJLEB_42); gnlProkkaGHEHJLEB_43 (original name was: gnl|Prokka|GHEHJLEB_43); gnlProkkaGHEHJLEB_44 (original name was: gnl|Prokka|GHEHJLEB_44); gnlProkkaGHEHJLEB_45 (original name was: gnl|Prokka|GHEHJLEB_45); gnlProkkaGHEHJLEB_46 (original name was: gnl|Prokka|GHEHJLEB_46); gnlProkkaGHEHJLEB_47 (original name was: gnl|Prokka|GHEHJLEB_47); gnlProkkaGHEHJLEB_48 (original name was: gnl|Prokka|GHEHJLEB_48); gnlProkkaGHEHJLEB_49 (original name was: gnl|Prokka|GHEHJLEB_49); gnlProkkaGHEHJLEB_50 (original name was: gnl|Prokka|GHEHJLEB_50); gnlProkkaGHEHJLEB_51 (original name was: gnl|Prokka|GHEHJLEB_51); gnlProkkaGHEHJLEB_52 (original name was: gnl|Prokka|GHEHJLEB_52); gnlProkkaGHEHJLEB_53 (original name was: gnl|Prokka|GHEHJLEB_53); gnlProkkaGHEHJLEB_54 (original name was: gnl|Prokka|GHEHJLEB_54); gnlProkkaGHEHJLEB_55 (original name was: gnl|Prokka|GHEHJLEB_55); gnlProkkaGHEHJLEB_56 (original name was: gnl|Prokka|GHEHJLEB_56); gnlProkkaGHEHJLEB_57 (original name was: gnl|Prokka|GHEHJLEB_57); gnlProkkaGHEHJLEB_58 (original name was: gnl|Prokka|GHEHJLEB_58); gnlProkkaGHEHJLEB_59 (original name was: gnl|Prokka|GHEHJLEB_59); gnlProkkaGHEHJLEB_60 (original name was: gnl|Prokka|GHEHJLEB_60); gnlProkkaGHEHJLEB_61 (original name was: gnl|Prokka|GHEHJLEB_61); gnlProkkaGHEHJLEB_62 (original name was: gnl|Prokka|GHEHJLEB_62); gnlProkkaGHEHJLEB_63 (original name was: gnl|Prokka|GHEHJLEB_63); gnlProkkaGHEHJLEB_64 (original name was: gnl|Prokka|GHEHJLEB_64); gnlProkkaGHEHJLEB_65 (original name was: gnl|Prokka|GHEHJLEB_65); gnlProkkaGHEHJLEB_66 (original name was: gnl|Prokka|GHEHJLEB_66); gnlProkkaGHEHJLEB_67 (original name was: gnl|Prokka|GHEHJLEB_67); gnlProkkaGHEHJLEB_68 (original name was: gnl|Prokka|GHEHJLEB_68); gnlProkkaGHEHJLEB_69 (original name was: gnl|Prokka|GHEHJLEB_69); gnlProkkaGHEHJLEB_70 (original name was: gnl|Prokka|GHEHJLEB_70); gnlProkkaGHEHJLEB_71 (original name was: gnl|Prokka|GHEHJLEB_71); gnlProkkaGHEHJLEB_72 (original name was: gnl|Prokka|GHEHJLEB_72); gnlProkkaGHEHJLEB_73 (original name was: gnl|Prokka|GHEHJLEB_73); gnlProkkaGHEHJLEB_74 (original name was: gnl|Prokka|GHEHJLEB_74); gnlProkkaGHEHJLEB_75 (original name was: gnl|Prokka|GHEHJLEB_75); gnlProkkaGHEHJLEB_76 (original name was: gnl|Prokka|GHEHJLEB_76); gnlProkkaGHEHJLEB_77 (original name was: gnl|Prokka|GHEHJLEB_77); gnlProkkaGHEHJLEB_78 (original name was: gnl|Prokka|GHEHJLEB_78); gnlProkkaGHEHJLEB_79 (original name was: gnl|Prokka|GHEHJLEB_79); gnlProkkaGHEHJLEB_80 (original name was: gnl|Prokka|GHEHJLEB_80); gnlProkkaGHEHJLEB_81 (original name was: gnl|Prokka|GHEHJLEB_81); gnlProkkaGHEHJLEB_82 (original name was: gnl|Prokka|GHEHJLEB_82); gnlProkkaGHEHJLEB_83 (original name was: gnl|Prokka|GHEHJLEB_83); gnlProkkaGHEHJLEB_84 (original name was: gnl|Prokka|GHEHJLEB_84); gnlProkkaGHEHJLEB_85 (original name was: gnl|Prokka|GHEHJLEB_85); gnlProkkaGHEHJLEB_86 (original name was: gnl|Prokka|GHEHJLEB_86); gnlProkkaGHEHJLEB_87 (original name was: gnl|Prokka|GHEHJLEB_87); gnlProkkaGHEHJLEB_88 (original name was: gnl|Prokka|GHEHJLEB_88)

Compact view

gnlProkkaGHEHJLEB_31 - Region 1 - RiPP-like

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Location: 1 - 5,787 nt. (total: 5,787 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGHEHJLEB_36 - Region 1 - RiPP-like

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Location: 9,905 - 16,180 nt. (total: 6,276 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGHEHJLEB_40 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 7,455 nt. (total: 7,455 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.