GCA_009680005.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDJAJDBJK_16 (original name was: gnl|Prokka|DJAJDBJK_16)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	cyclic-lactone-autoinducer	1	20,577

gnlProkkaDJAJDBJK_21 (original name was: gnl|Prokka|DJAJDBJK_21)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	ranthipeptide	292,178	313,843

gnlProkkaDJAJDBJK_35 (original name was: gnl|Prokka|DJAJDBJK_35)

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	cyclic-lactone-autoinducer	7,732	23,622

gnlProkkaDJAJDBJK_82 (original name was: gnl|Prokka|DJAJDBJK_82)

Region	Type	From	To	Most similar known cluster		Similarity
Region 82.1	lassopeptide	1	1,785

gnlProkkaDJAJDBJK_87 (original name was: gnl|Prokka|DJAJDBJK_87)

Region	Type	From	To	Most similar known cluster		Similarity
Region 87.1	cyclic-lactone-autoinducer	80,265	100,873

Region	Type	From	To	Similarity
Region 16.1	cyclic-lactone-autoinducer	1	20,577
Region 21.1	ranthipeptide	292,178	313,843
Region 35.1	cyclic-lactone-autoinducer	7,732	23,622
Region 82.1	lassopeptide	1	1,785
Region 87.1	cyclic-lactone-autoinducer	80,265	100,873

Compact view

gnlProkkaDJAJDBJK_16 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 20,577 nt. (total: 20,577 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDJAJDBJK_21 - Region 1 - ranthipeptide

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Location: 292,178 - 313,843 nt. (total: 21,666 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDJAJDBJK_35 - Region 1 - cyclic-lactone-autoinducer

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Location: 7,732 - 23,622 nt. (total: 15,891 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDJAJDBJK_82 - Region 1 - lassopeptide

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Location: 1 - 1,785 nt. (total: 1,785 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lasso peptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.

gnlProkkaDJAJDBJK_87 - Region 1 - cyclic-lactone-autoinducer

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Location: 80,265 - 100,873 nt. (total: 20,609 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.