GCA_009680015.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaAEAHADKA_14 (original name was: gnl|Prokka|AEAHADKA_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	cyclic-lactone-autoinducer	35,824	51,765

gnlProkkaAEAHADKA_23 (original name was: gnl|Prokka|AEAHADKA_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	cyclic-lactone-autoinducer	1	20,468

gnlProkkaAEAHADKA_56 (original name was: gnl|Prokka|AEAHADKA_56)

Region	Type	From	To	Most similar known cluster		Similarity
Region 56.1	ranthipeptide	134,964	156,629

Region	Type	From	To	Similarity
Region 14.1	cyclic-lactone-autoinducer	35,824	51,765
Region 23.1	cyclic-lactone-autoinducer	1	20,468
Region 56.1	ranthipeptide	134,964	156,629

No secondary metabolite regions were found in these records:: gnlProkkaAEAHADKA_1 (original name was: gnl|Prokka|AEAHADKA_1); gnlProkkaAEAHADKA_2 (original name was: gnl|Prokka|AEAHADKA_2); gnlProkkaAEAHADKA_3 (original name was: gnl|Prokka|AEAHADKA_3); gnlProkkaAEAHADKA_4 (original name was: gnl|Prokka|AEAHADKA_4); gnlProkkaAEAHADKA_5 (original name was: gnl|Prokka|AEAHADKA_5); gnlProkkaAEAHADKA_6 (original name was: gnl|Prokka|AEAHADKA_6); gnlProkkaAEAHADKA_7 (original name was: gnl|Prokka|AEAHADKA_7); gnlProkkaAEAHADKA_8 (original name was: gnl|Prokka|AEAHADKA_8); gnlProkkaAEAHADKA_9 (original name was: gnl|Prokka|AEAHADKA_9); gnlProkkaAEAHADKA_10 (original name was: gnl|Prokka|AEAHADKA_10); gnlProkkaAEAHADKA_11 (original name was: gnl|Prokka|AEAHADKA_11); gnlProkkaAEAHADKA_12 (original name was: gnl|Prokka|AEAHADKA_12); gnlProkkaAEAHADKA_13 (original name was: gnl|Prokka|AEAHADKA_13); gnlProkkaAEAHADKA_15 (original name was: gnl|Prokka|AEAHADKA_15); gnlProkkaAEAHADKA_16 (original name was: gnl|Prokka|AEAHADKA_16); gnlProkkaAEAHADKA_17 (original name was: gnl|Prokka|AEAHADKA_17); gnlProkkaAEAHADKA_18 (original name was: gnl|Prokka|AEAHADKA_18); gnlProkkaAEAHADKA_19 (original name was: gnl|Prokka|AEAHADKA_19); gnlProkkaAEAHADKA_20 (original name was: gnl|Prokka|AEAHADKA_20); gnlProkkaAEAHADKA_21 (original name was: gnl|Prokka|AEAHADKA_21); gnlProkkaAEAHADKA_22 (original name was: gnl|Prokka|AEAHADKA_22); gnlProkkaAEAHADKA_24 (original name was: gnl|Prokka|AEAHADKA_24); gnlProkkaAEAHADKA_25 (original name was: gnl|Prokka|AEAHADKA_25); gnlProkkaAEAHADKA_26 (original name was: gnl|Prokka|AEAHADKA_26); gnlProkkaAEAHADKA_27 (original name was: gnl|Prokka|AEAHADKA_27); gnlProkkaAEAHADKA_28 (original name was: gnl|Prokka|AEAHADKA_28); gnlProkkaAEAHADKA_29 (original name was: gnl|Prokka|AEAHADKA_29); gnlProkkaAEAHADKA_30 (original name was: gnl|Prokka|AEAHADKA_30); gnlProkkaAEAHADKA_31 (original name was: gnl|Prokka|AEAHADKA_31); gnlProkkaAEAHADKA_32 (original name was: gnl|Prokka|AEAHADKA_32); gnlProkkaAEAHADKA_33 (original name was: gnl|Prokka|AEAHADKA_33); gnlProkkaAEAHADKA_34 (original name was: gnl|Prokka|AEAHADKA_34); gnlProkkaAEAHADKA_35 (original name was: gnl|Prokka|AEAHADKA_35); gnlProkkaAEAHADKA_36 (original name was: gnl|Prokka|AEAHADKA_36); gnlProkkaAEAHADKA_37 (original name was: gnl|Prokka|AEAHADKA_37); gnlProkkaAEAHADKA_38 (original name was: gnl|Prokka|AEAHADKA_38); gnlProkkaAEAHADKA_39 (original name was: gnl|Prokka|AEAHADKA_39); gnlProkkaAEAHADKA_40 (original name was: gnl|Prokka|AEAHADKA_40); gnlProkkaAEAHADKA_41 (original name was: gnl|Prokka|AEAHADKA_41); gnlProkkaAEAHADKA_42 (original name was: gnl|Prokka|AEAHADKA_42); gnlProkkaAEAHADKA_43 (original name was: gnl|Prokka|AEAHADKA_43); gnlProkkaAEAHADKA_44 (original name was: gnl|Prokka|AEAHADKA_44); gnlProkkaAEAHADKA_45 (original name was: gnl|Prokka|AEAHADKA_45); gnlProkkaAEAHADKA_46 (original name was: gnl|Prokka|AEAHADKA_46); gnlProkkaAEAHADKA_47 (original name was: gnl|Prokka|AEAHADKA_47); gnlProkkaAEAHADKA_48 (original name was: gnl|Prokka|AEAHADKA_48); gnlProkkaAEAHADKA_49 (original name was: gnl|Prokka|AEAHADKA_49); gnlProkkaAEAHADKA_50 (original name was: gnl|Prokka|AEAHADKA_50); gnlProkkaAEAHADKA_51 (original name was: gnl|Prokka|AEAHADKA_51); gnlProkkaAEAHADKA_52 (original name was: gnl|Prokka|AEAHADKA_52); gnlProkkaAEAHADKA_53 (original name was: gnl|Prokka|AEAHADKA_53); gnlProkkaAEAHADKA_54 (original name was: gnl|Prokka|AEAHADKA_54); gnlProkkaAEAHADKA_55 (original name was: gnl|Prokka|AEAHADKA_55); gnlProkkaAEAHADKA_57 (original name was: gnl|Prokka|AEAHADKA_57); gnlProkkaAEAHADKA_58 (original name was: gnl|Prokka|AEAHADKA_58); gnlProkkaAEAHADKA_59 (original name was: gnl|Prokka|AEAHADKA_59); gnlProkkaAEAHADKA_60 (original name was: gnl|Prokka|AEAHADKA_60); gnlProkkaAEAHADKA_61 (original name was: gnl|Prokka|AEAHADKA_61); gnlProkkaAEAHADKA_62 (original name was: gnl|Prokka|AEAHADKA_62); gnlProkkaAEAHADKA_63 (original name was: gnl|Prokka|AEAHADKA_63); gnlProkkaAEAHADKA_64 (original name was: gnl|Prokka|AEAHADKA_64); gnlProkkaAEAHADKA_65 (original name was: gnl|Prokka|AEAHADKA_65); gnlProkkaAEAHADKA_66 (original name was: gnl|Prokka|AEAHADKA_66); gnlProkkaAEAHADKA_67 (original name was: gnl|Prokka|AEAHADKA_67); gnlProkkaAEAHADKA_68 (original name was: gnl|Prokka|AEAHADKA_68); gnlProkkaAEAHADKA_69 (original name was: gnl|Prokka|AEAHADKA_69); gnlProkkaAEAHADKA_70 (original name was: gnl|Prokka|AEAHADKA_70); gnlProkkaAEAHADKA_71 (original name was: gnl|Prokka|AEAHADKA_71); gnlProkkaAEAHADKA_72 (original name was: gnl|Prokka|AEAHADKA_72); gnlProkkaAEAHADKA_73 (original name was: gnl|Prokka|AEAHADKA_73); gnlProkkaAEAHADKA_74 (original name was: gnl|Prokka|AEAHADKA_74); gnlProkkaAEAHADKA_75 (original name was: gnl|Prokka|AEAHADKA_75); gnlProkkaAEAHADKA_76 (original name was: gnl|Prokka|AEAHADKA_76); gnlProkkaAEAHADKA_77 (original name was: gnl|Prokka|AEAHADKA_77); gnlProkkaAEAHADKA_78 (original name was: gnl|Prokka|AEAHADKA_78); gnlProkkaAEAHADKA_79 (original name was: gnl|Prokka|AEAHADKA_79); gnlProkkaAEAHADKA_80 (original name was: gnl|Prokka|AEAHADKA_80); gnlProkkaAEAHADKA_81 (original name was: gnl|Prokka|AEAHADKA_81); gnlProkkaAEAHADKA_82 (original name was: gnl|Prokka|AEAHADKA_82); gnlProkkaAEAHADKA_83 (original name was: gnl|Prokka|AEAHADKA_83); gnlProkkaAEAHADKA_84 (original name was: gnl|Prokka|AEAHADKA_84); gnlProkkaAEAHADKA_85 (original name was: gnl|Prokka|AEAHADKA_85); gnlProkkaAEAHADKA_86 (original name was: gnl|Prokka|AEAHADKA_86); gnlProkkaAEAHADKA_87 (original name was: gnl|Prokka|AEAHADKA_87); gnlProkkaAEAHADKA_88 (original name was: gnl|Prokka|AEAHADKA_88); gnlProkkaAEAHADKA_89 (original name was: gnl|Prokka|AEAHADKA_89); gnlProkkaAEAHADKA_90 (original name was: gnl|Prokka|AEAHADKA_90); gnlProkkaAEAHADKA_91 (original name was: gnl|Prokka|AEAHADKA_91); gnlProkkaAEAHADKA_92 (original name was: gnl|Prokka|AEAHADKA_92); gnlProkkaAEAHADKA_93 (original name was: gnl|Prokka|AEAHADKA_93); gnlProkkaAEAHADKA_94 (original name was: gnl|Prokka|AEAHADKA_94); gnlProkkaAEAHADKA_95 (original name was: gnl|Prokka|AEAHADKA_95); gnlProkkaAEAHADKA_96 (original name was: gnl|Prokka|AEAHADKA_96)

Compact view

gnlProkkaAEAHADKA_14 - Region 1 - cyclic-lactone-autoinducer

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Location: 35,824 - 51,765 nt. (total: 15,942 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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core biosynthetic genes

additional biosynthetic genes

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regulatory genes

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resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAEAHADKA_23 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 20,468 nt. (total: 20,468 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAEAHADKA_56 - Region 1 - ranthipeptide

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Location: 134,964 - 156,629 nt. (total: 21,666 nt) Show pHMM detection rules used

Region on contig edge.

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.