GCA_009716945.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNHIMFEAK_5 (original name was: gnl|Prokka|NHIMFEAK_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	T3PKS	5,003	45,348

gnlProkkaNHIMFEAK_22 (original name was: gnl|Prokka|NHIMFEAK_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RiPP-like	73,261	85,357	quinolidomicin A	Polyketide	3%

gnlProkkaNHIMFEAK_38 (original name was: gnl|Prokka|NHIMFEAK_38)

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	RiPP-like	117,753	136,545

gnlProkkaNHIMFEAK_42 (original name was: gnl|Prokka|NHIMFEAK_42)

Region	Type	From	To	Most similar known cluster		Similarity
Region 42.1	RRE-containing	46,910	68,043

Region	Type	From	To	Most similar known cluster	Similarity
Region 5.1	T3PKS	5,003	45,348
Region 22.1	RiPP-like	73,261	85,357	quinolidomicin A	Polyketide	3%
Region 38.1	RiPP-like	117,753	136,545
Region 42.1	RRE-containing	46,910	68,043

No secondary metabolite regions were found in these records:: gnlProkkaNHIMFEAK_1 (original name was: gnl|Prokka|NHIMFEAK_1); gnlProkkaNHIMFEAK_2 (original name was: gnl|Prokka|NHIMFEAK_2); gnlProkkaNHIMFEAK_3 (original name was: gnl|Prokka|NHIMFEAK_3); gnlProkkaNHIMFEAK_4 (original name was: gnl|Prokka|NHIMFEAK_4); gnlProkkaNHIMFEAK_6 (original name was: gnl|Prokka|NHIMFEAK_6); gnlProkkaNHIMFEAK_7 (original name was: gnl|Prokka|NHIMFEAK_7); gnlProkkaNHIMFEAK_8 (original name was: gnl|Prokka|NHIMFEAK_8); gnlProkkaNHIMFEAK_9 (original name was: gnl|Prokka|NHIMFEAK_9); gnlProkkaNHIMFEAK_10 (original name was: gnl|Prokka|NHIMFEAK_10); gnlProkkaNHIMFEAK_11 (original name was: gnl|Prokka|NHIMFEAK_11); gnlProkkaNHIMFEAK_12 (original name was: gnl|Prokka|NHIMFEAK_12); gnlProkkaNHIMFEAK_13 (original name was: gnl|Prokka|NHIMFEAK_13); gnlProkkaNHIMFEAK_14 (original name was: gnl|Prokka|NHIMFEAK_14); gnlProkkaNHIMFEAK_15 (original name was: gnl|Prokka|NHIMFEAK_15); gnlProkkaNHIMFEAK_16 (original name was: gnl|Prokka|NHIMFEAK_16); gnlProkkaNHIMFEAK_17 (original name was: gnl|Prokka|NHIMFEAK_17); gnlProkkaNHIMFEAK_18 (original name was: gnl|Prokka|NHIMFEAK_18); gnlProkkaNHIMFEAK_19 (original name was: gnl|Prokka|NHIMFEAK_19); gnlProkkaNHIMFEAK_20 (original name was: gnl|Prokka|NHIMFEAK_20); gnlProkkaNHIMFEAK_21 (original name was: gnl|Prokka|NHIMFEAK_21); gnlProkkaNHIMFEAK_23 (original name was: gnl|Prokka|NHIMFEAK_23); gnlProkkaNHIMFEAK_24 (original name was: gnl|Prokka|NHIMFEAK_24); gnlProkkaNHIMFEAK_25 (original name was: gnl|Prokka|NHIMFEAK_25); gnlProkkaNHIMFEAK_26 (original name was: gnl|Prokka|NHIMFEAK_26); gnlProkkaNHIMFEAK_27 (original name was: gnl|Prokka|NHIMFEAK_27); gnlProkkaNHIMFEAK_28 (original name was: gnl|Prokka|NHIMFEAK_28); gnlProkkaNHIMFEAK_29 (original name was: gnl|Prokka|NHIMFEAK_29); gnlProkkaNHIMFEAK_30 (original name was: gnl|Prokka|NHIMFEAK_30); gnlProkkaNHIMFEAK_31 (original name was: gnl|Prokka|NHIMFEAK_31); gnlProkkaNHIMFEAK_32 (original name was: gnl|Prokka|NHIMFEAK_32); gnlProkkaNHIMFEAK_33 (original name was: gnl|Prokka|NHIMFEAK_33); gnlProkkaNHIMFEAK_34 (original name was: gnl|Prokka|NHIMFEAK_34); gnlProkkaNHIMFEAK_35 (original name was: gnl|Prokka|NHIMFEAK_35); gnlProkkaNHIMFEAK_36 (original name was: gnl|Prokka|NHIMFEAK_36); gnlProkkaNHIMFEAK_37 (original name was: gnl|Prokka|NHIMFEAK_37); gnlProkkaNHIMFEAK_39 (original name was: gnl|Prokka|NHIMFEAK_39); gnlProkkaNHIMFEAK_40 (original name was: gnl|Prokka|NHIMFEAK_40); gnlProkkaNHIMFEAK_41 (original name was: gnl|Prokka|NHIMFEAK_41); gnlProkkaNHIMFEAK_43 (original name was: gnl|Prokka|NHIMFEAK_43)

Compact view

gnlProkkaNHIMFEAK_5 - Region 1 - T3PKS

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Location: 5,003 - 45,348 nt. (total: 40,346 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNHIMFEAK_22 - Region 1 - RiPP-like

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Location: 73,261 - 85,357 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaNHIMFEAK_38 - Region 1 - RiPP-like

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Location: 117,753 - 136,545 nt. (total: 18,793 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNHIMFEAK_42 - Region 1 - RRE-containing

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Location: 46,910 - 68,043 nt. (total: 21,134 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.