GCA_009717065.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaAPPLDMEG_15 (original name was: gnl|Prokka|APPLDMEG_15)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	T3PKS	53,202	94,368
Region 15.2	RiPP-like	170,667	189,459

gnlProkkaAPPLDMEG_16 (original name was: gnl|Prokka|APPLDMEG_16)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	RiPP-like	129,995	142,091	quinolidomicin A	Polyketide	3%

Region	Type	From	To	Most similar known cluster	Similarity
Region 15.1	T3PKS	53,202	94,368
Region 15.2	RiPP-like	170,667	189,459
Region 16.1	RiPP-like	129,995	142,091	quinolidomicin A	Polyketide	3%

No secondary metabolite regions were found in these records:: gnlProkkaAPPLDMEG_1 (original name was: gnl|Prokka|APPLDMEG_1); gnlProkkaAPPLDMEG_2 (original name was: gnl|Prokka|APPLDMEG_2); gnlProkkaAPPLDMEG_3 (original name was: gnl|Prokka|APPLDMEG_3); gnlProkkaAPPLDMEG_4 (original name was: gnl|Prokka|APPLDMEG_4); gnlProkkaAPPLDMEG_5 (original name was: gnl|Prokka|APPLDMEG_5); gnlProkkaAPPLDMEG_6 (original name was: gnl|Prokka|APPLDMEG_6); gnlProkkaAPPLDMEG_7 (original name was: gnl|Prokka|APPLDMEG_7); gnlProkkaAPPLDMEG_8 (original name was: gnl|Prokka|APPLDMEG_8); gnlProkkaAPPLDMEG_9 (original name was: gnl|Prokka|APPLDMEG_9); gnlProkkaAPPLDMEG_10 (original name was: gnl|Prokka|APPLDMEG_10); gnlProkkaAPPLDMEG_11 (original name was: gnl|Prokka|APPLDMEG_11); gnlProkkaAPPLDMEG_12 (original name was: gnl|Prokka|APPLDMEG_12); gnlProkkaAPPLDMEG_13 (original name was: gnl|Prokka|APPLDMEG_13); gnlProkkaAPPLDMEG_14 (original name was: gnl|Prokka|APPLDMEG_14); gnlProkkaAPPLDMEG_17 (original name was: gnl|Prokka|APPLDMEG_17); gnlProkkaAPPLDMEG_18 (original name was: gnl|Prokka|APPLDMEG_18); gnlProkkaAPPLDMEG_19 (original name was: gnl|Prokka|APPLDMEG_19); gnlProkkaAPPLDMEG_20 (original name was: gnl|Prokka|APPLDMEG_20); gnlProkkaAPPLDMEG_21 (original name was: gnl|Prokka|APPLDMEG_21); gnlProkkaAPPLDMEG_22 (original name was: gnl|Prokka|APPLDMEG_22)

Compact view

gnlProkkaAPPLDMEG_15 - Region 1 - T3PKS

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Location: 53,202 - 94,368 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAPPLDMEG_15 - Region 2 - RiPP-like

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Location: 170,667 - 189,459 nt. (total: 18,793 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAPPLDMEG_16 - Region 1 - RiPP-like

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Location: 129,995 - 142,091 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1