GCA_009717165.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIHHHGOGC_10 (original name was: gnl|Prokka|IHHHGOGC_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	T3PKS	101,691	142,857

gnlProkkaIHHHGOGC_13 (original name was: gnl|Prokka|IHHHGOGC_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	RiPP-like	118,688	137,480

gnlProkkaIHHHGOGC_14 (original name was: gnl|Prokka|IHHHGOGC_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	RiPP-like	129,995	142,091	quinolidomicin A	Polyketide	3%

Region	Type	From	To	Most similar known cluster	Similarity
Region 10.1	T3PKS	101,691	142,857
Region 13.1	RiPP-like	118,688	137,480
Region 14.1	RiPP-like	129,995	142,091	quinolidomicin A	Polyketide	3%

No secondary metabolite regions were found in these records:: gnlProkkaIHHHGOGC_1 (original name was: gnl|Prokka|IHHHGOGC_1); gnlProkkaIHHHGOGC_2 (original name was: gnl|Prokka|IHHHGOGC_2); gnlProkkaIHHHGOGC_3 (original name was: gnl|Prokka|IHHHGOGC_3); gnlProkkaIHHHGOGC_4 (original name was: gnl|Prokka|IHHHGOGC_4); gnlProkkaIHHHGOGC_5 (original name was: gnl|Prokka|IHHHGOGC_5); gnlProkkaIHHHGOGC_6 (original name was: gnl|Prokka|IHHHGOGC_6); gnlProkkaIHHHGOGC_7 (original name was: gnl|Prokka|IHHHGOGC_7); gnlProkkaIHHHGOGC_8 (original name was: gnl|Prokka|IHHHGOGC_8); gnlProkkaIHHHGOGC_9 (original name was: gnl|Prokka|IHHHGOGC_9); gnlProkkaIHHHGOGC_11 (original name was: gnl|Prokka|IHHHGOGC_11); gnlProkkaIHHHGOGC_12 (original name was: gnl|Prokka|IHHHGOGC_12); gnlProkkaIHHHGOGC_15 (original name was: gnl|Prokka|IHHHGOGC_15); gnlProkkaIHHHGOGC_16 (original name was: gnl|Prokka|IHHHGOGC_16); gnlProkkaIHHHGOGC_17 (original name was: gnl|Prokka|IHHHGOGC_17); gnlProkkaIHHHGOGC_18 (original name was: gnl|Prokka|IHHHGOGC_18); gnlProkkaIHHHGOGC_19 (original name was: gnl|Prokka|IHHHGOGC_19)

Compact view

gnlProkkaIHHHGOGC_10 - Region 1 - T3PKS

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Location: 101,691 - 142,857 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

NRPS/PKS domains

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIHHHGOGC_13 - Region 1 - RiPP-like

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Location: 118,688 - 137,480 nt. (total: 18,793 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIHHHGOGC_14 - Region 1 - RiPP-like

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Location: 129,995 - 142,091 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1