GCA_009717245.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNCKACFLB_11 (original name was: gnl|Prokka|NCKACFLB_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	203,362	244,528

gnlProkkaNCKACFLB_14 (original name was: gnl|Prokka|NCKACFLB_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	RiPP-like	118,721	137,513

gnlProkkaNCKACFLB_15 (original name was: gnl|Prokka|NCKACFLB_15)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	RiPP-like	130,028	142,124	quinolidomicin A	Polyketide	3%

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	T3PKS	203,362	244,528
Region 14.1	RiPP-like	118,721	137,513
Region 15.1	RiPP-like	130,028	142,124	quinolidomicin A	Polyketide	3%

No secondary metabolite regions were found in these records:: gnlProkkaNCKACFLB_1 (original name was: gnl|Prokka|NCKACFLB_1); gnlProkkaNCKACFLB_2 (original name was: gnl|Prokka|NCKACFLB_2); gnlProkkaNCKACFLB_3 (original name was: gnl|Prokka|NCKACFLB_3); gnlProkkaNCKACFLB_4 (original name was: gnl|Prokka|NCKACFLB_4); gnlProkkaNCKACFLB_5 (original name was: gnl|Prokka|NCKACFLB_5); gnlProkkaNCKACFLB_6 (original name was: gnl|Prokka|NCKACFLB_6); gnlProkkaNCKACFLB_7 (original name was: gnl|Prokka|NCKACFLB_7); gnlProkkaNCKACFLB_8 (original name was: gnl|Prokka|NCKACFLB_8); gnlProkkaNCKACFLB_9 (original name was: gnl|Prokka|NCKACFLB_9); gnlProkkaNCKACFLB_10 (original name was: gnl|Prokka|NCKACFLB_10); gnlProkkaNCKACFLB_12 (original name was: gnl|Prokka|NCKACFLB_12); gnlProkkaNCKACFLB_13 (original name was: gnl|Prokka|NCKACFLB_13); gnlProkkaNCKACFLB_16 (original name was: gnl|Prokka|NCKACFLB_16); gnlProkkaNCKACFLB_17 (original name was: gnl|Prokka|NCKACFLB_17); gnlProkkaNCKACFLB_18 (original name was: gnl|Prokka|NCKACFLB_18); gnlProkkaNCKACFLB_19 (original name was: gnl|Prokka|NCKACFLB_19); gnlProkkaNCKACFLB_20 (original name was: gnl|Prokka|NCKACFLB_20)

Compact view

gnlProkkaNCKACFLB_11 - Region 1 - T3PKS

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Location: 203,362 - 244,528 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

NRPS/PKS domains

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNCKACFLB_14 - Region 1 - RiPP-like

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Location: 118,721 - 137,513 nt. (total: 18,793 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNCKACFLB_15 - Region 1 - RiPP-like

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Location: 130,028 - 142,124 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1