GCA_009717395.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKPKKBODK_22 (original name was: gnl|Prokka|KPKKBODK_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	111,989	153,155

gnlProkkaKPKKBODK_33 (original name was: gnl|Prokka|KPKKBODK_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	RiPP-like	79,596	98,387

gnlProkkaKPKKBODK_49 (original name was: gnl|Prokka|KPKKBODK_49)

Region	Type	From	To	Most similar known cluster		Similarity
Region 49.1	RiPP-like	33,118	45,214	quinolidomicin A	Polyketide	3%

Region	Type	From	To	Most similar known cluster	Similarity
Region 22.1	T3PKS	111,989	153,155
Region 33.1	RiPP-like	79,596	98,387
Region 49.1	RiPP-like	33,118	45,214	quinolidomicin A	Polyketide	3%

No secondary metabolite regions were found in these records:: gnlProkkaKPKKBODK_1 (original name was: gnl|Prokka|KPKKBODK_1); gnlProkkaKPKKBODK_2 (original name was: gnl|Prokka|KPKKBODK_2); gnlProkkaKPKKBODK_3 (original name was: gnl|Prokka|KPKKBODK_3); gnlProkkaKPKKBODK_4 (original name was: gnl|Prokka|KPKKBODK_4); gnlProkkaKPKKBODK_5 (original name was: gnl|Prokka|KPKKBODK_5); gnlProkkaKPKKBODK_6 (original name was: gnl|Prokka|KPKKBODK_6); gnlProkkaKPKKBODK_7 (original name was: gnl|Prokka|KPKKBODK_7); gnlProkkaKPKKBODK_8 (original name was: gnl|Prokka|KPKKBODK_8); gnlProkkaKPKKBODK_9 (original name was: gnl|Prokka|KPKKBODK_9); gnlProkkaKPKKBODK_10 (original name was: gnl|Prokka|KPKKBODK_10); gnlProkkaKPKKBODK_11 (original name was: gnl|Prokka|KPKKBODK_11); gnlProkkaKPKKBODK_12 (original name was: gnl|Prokka|KPKKBODK_12); gnlProkkaKPKKBODK_13 (original name was: gnl|Prokka|KPKKBODK_13); gnlProkkaKPKKBODK_14 (original name was: gnl|Prokka|KPKKBODK_14); gnlProkkaKPKKBODK_15 (original name was: gnl|Prokka|KPKKBODK_15); gnlProkkaKPKKBODK_16 (original name was: gnl|Prokka|KPKKBODK_16); gnlProkkaKPKKBODK_17 (original name was: gnl|Prokka|KPKKBODK_17); gnlProkkaKPKKBODK_18 (original name was: gnl|Prokka|KPKKBODK_18); gnlProkkaKPKKBODK_19 (original name was: gnl|Prokka|KPKKBODK_19); gnlProkkaKPKKBODK_20 (original name was: gnl|Prokka|KPKKBODK_20); gnlProkkaKPKKBODK_21 (original name was: gnl|Prokka|KPKKBODK_21); gnlProkkaKPKKBODK_23 (original name was: gnl|Prokka|KPKKBODK_23); gnlProkkaKPKKBODK_24 (original name was: gnl|Prokka|KPKKBODK_24); gnlProkkaKPKKBODK_25 (original name was: gnl|Prokka|KPKKBODK_25); gnlProkkaKPKKBODK_26 (original name was: gnl|Prokka|KPKKBODK_26); gnlProkkaKPKKBODK_27 (original name was: gnl|Prokka|KPKKBODK_27); gnlProkkaKPKKBODK_28 (original name was: gnl|Prokka|KPKKBODK_28); gnlProkkaKPKKBODK_29 (original name was: gnl|Prokka|KPKKBODK_29); gnlProkkaKPKKBODK_30 (original name was: gnl|Prokka|KPKKBODK_30); gnlProkkaKPKKBODK_31 (original name was: gnl|Prokka|KPKKBODK_31); gnlProkkaKPKKBODK_32 (original name was: gnl|Prokka|KPKKBODK_32); gnlProkkaKPKKBODK_34 (original name was: gnl|Prokka|KPKKBODK_34); gnlProkkaKPKKBODK_35 (original name was: gnl|Prokka|KPKKBODK_35); gnlProkkaKPKKBODK_36 (original name was: gnl|Prokka|KPKKBODK_36); gnlProkkaKPKKBODK_37 (original name was: gnl|Prokka|KPKKBODK_37); gnlProkkaKPKKBODK_38 (original name was: gnl|Prokka|KPKKBODK_38); gnlProkkaKPKKBODK_39 (original name was: gnl|Prokka|KPKKBODK_39); gnlProkkaKPKKBODK_40 (original name was: gnl|Prokka|KPKKBODK_40); gnlProkkaKPKKBODK_41 (original name was: gnl|Prokka|KPKKBODK_41); gnlProkkaKPKKBODK_42 (original name was: gnl|Prokka|KPKKBODK_42); gnlProkkaKPKKBODK_43 (original name was: gnl|Prokka|KPKKBODK_43); gnlProkkaKPKKBODK_44 (original name was: gnl|Prokka|KPKKBODK_44); gnlProkkaKPKKBODK_45 (original name was: gnl|Prokka|KPKKBODK_45); gnlProkkaKPKKBODK_46 (original name was: gnl|Prokka|KPKKBODK_46); gnlProkkaKPKKBODK_47 (original name was: gnl|Prokka|KPKKBODK_47); gnlProkkaKPKKBODK_48 (original name was: gnl|Prokka|KPKKBODK_48)

Compact view

gnlProkkaKPKKBODK_22 - Region 1 - T3PKS

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Location: 111,989 - 153,155 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Gene overview

NRPS/PKS domains

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKPKKBODK_33 - Region 1 - RiPP-like

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Location: 79,596 - 98,387 nt. (total: 18,792 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKPKKBODK_49 - Region 1 - RiPP-like

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Location: 33,118 - 45,214 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1