GCA_009717465.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGBIBDABG_11 (original name was: gnl|Prokka|GBIBDABG_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	214,177	255,343

gnlProkkaGBIBDABG_18 (original name was: gnl|Prokka|GBIBDABG_18)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	RiPP-like	73,878	85,974	quinolidomicin A	Polyketide	3%

gnlProkkaGBIBDABG_20 (original name was: gnl|Prokka|GBIBDABG_20)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	RiPP-like	28,597	38,797
Region 20.2	RiPP-like	106,045	124,901

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	T3PKS	214,177	255,343
Region 18.1	RiPP-like	73,878	85,974	quinolidomicin A	Polyketide	3%
Region 20.1	RiPP-like	28,597	38,797
Region 20.2	RiPP-like	106,045	124,901

No secondary metabolite regions were found in these records:: gnlProkkaGBIBDABG_1 (original name was: gnl|Prokka|GBIBDABG_1); gnlProkkaGBIBDABG_2 (original name was: gnl|Prokka|GBIBDABG_2); gnlProkkaGBIBDABG_3 (original name was: gnl|Prokka|GBIBDABG_3); gnlProkkaGBIBDABG_4 (original name was: gnl|Prokka|GBIBDABG_4); gnlProkkaGBIBDABG_5 (original name was: gnl|Prokka|GBIBDABG_5); gnlProkkaGBIBDABG_6 (original name was: gnl|Prokka|GBIBDABG_6); gnlProkkaGBIBDABG_7 (original name was: gnl|Prokka|GBIBDABG_7); gnlProkkaGBIBDABG_8 (original name was: gnl|Prokka|GBIBDABG_8); gnlProkkaGBIBDABG_9 (original name was: gnl|Prokka|GBIBDABG_9); gnlProkkaGBIBDABG_10 (original name was: gnl|Prokka|GBIBDABG_10); gnlProkkaGBIBDABG_12 (original name was: gnl|Prokka|GBIBDABG_12); gnlProkkaGBIBDABG_13 (original name was: gnl|Prokka|GBIBDABG_13); gnlProkkaGBIBDABG_14 (original name was: gnl|Prokka|GBIBDABG_14); gnlProkkaGBIBDABG_15 (original name was: gnl|Prokka|GBIBDABG_15); gnlProkkaGBIBDABG_16 (original name was: gnl|Prokka|GBIBDABG_16); gnlProkkaGBIBDABG_17 (original name was: gnl|Prokka|GBIBDABG_17); gnlProkkaGBIBDABG_19 (original name was: gnl|Prokka|GBIBDABG_19); gnlProkkaGBIBDABG_21 (original name was: gnl|Prokka|GBIBDABG_21); gnlProkkaGBIBDABG_22 (original name was: gnl|Prokka|GBIBDABG_22); gnlProkkaGBIBDABG_23 (original name was: gnl|Prokka|GBIBDABG_23); gnlProkkaGBIBDABG_24 (original name was: gnl|Prokka|GBIBDABG_24); gnlProkkaGBIBDABG_25 (original name was: gnl|Prokka|GBIBDABG_25)

Compact view

gnlProkkaGBIBDABG_11 - Region 1 - T3PKS

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Location: 214,177 - 255,343 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGBIBDABG_18 - Region 1 - RiPP-like

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Location: 73,878 - 85,974 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaGBIBDABG_20 - Region 1 - RiPP-like

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Location: 28,597 - 38,797 nt. (total: 10,201 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGBIBDABG_20 - Region 2 - RiPP-like

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Location: 106,045 - 124,901 nt. (total: 18,857 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.