GCA_009717495.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFLJBHAHG_11 (original name was: gnl|Prokka|FLJBHAHG_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	214,177	255,343

gnlProkkaFLJBHAHG_17 (original name was: gnl|Prokka|FLJBHAHG_17)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	RiPP-like	73,877	85,973	quinolidomicin A	Polyketide	3%

gnlProkkaFLJBHAHG_19 (original name was: gnl|Prokka|FLJBHAHG_19)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	RiPP-like	102,272	112,472
Region 19.2	RiPP-like	179,720	198,576

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	T3PKS	214,177	255,343
Region 17.1	RiPP-like	73,877	85,973	quinolidomicin A	Polyketide	3%
Region 19.1	RiPP-like	102,272	112,472
Region 19.2	RiPP-like	179,720	198,576

No secondary metabolite regions were found in these records:: gnlProkkaFLJBHAHG_1 (original name was: gnl|Prokka|FLJBHAHG_1); gnlProkkaFLJBHAHG_2 (original name was: gnl|Prokka|FLJBHAHG_2); gnlProkkaFLJBHAHG_3 (original name was: gnl|Prokka|FLJBHAHG_3); gnlProkkaFLJBHAHG_4 (original name was: gnl|Prokka|FLJBHAHG_4); gnlProkkaFLJBHAHG_5 (original name was: gnl|Prokka|FLJBHAHG_5); gnlProkkaFLJBHAHG_6 (original name was: gnl|Prokka|FLJBHAHG_6); gnlProkkaFLJBHAHG_7 (original name was: gnl|Prokka|FLJBHAHG_7); gnlProkkaFLJBHAHG_8 (original name was: gnl|Prokka|FLJBHAHG_8); gnlProkkaFLJBHAHG_9 (original name was: gnl|Prokka|FLJBHAHG_9); gnlProkkaFLJBHAHG_10 (original name was: gnl|Prokka|FLJBHAHG_10); gnlProkkaFLJBHAHG_12 (original name was: gnl|Prokka|FLJBHAHG_12); gnlProkkaFLJBHAHG_13 (original name was: gnl|Prokka|FLJBHAHG_13); gnlProkkaFLJBHAHG_14 (original name was: gnl|Prokka|FLJBHAHG_14); gnlProkkaFLJBHAHG_15 (original name was: gnl|Prokka|FLJBHAHG_15); gnlProkkaFLJBHAHG_16 (original name was: gnl|Prokka|FLJBHAHG_16); gnlProkkaFLJBHAHG_18 (original name was: gnl|Prokka|FLJBHAHG_18); gnlProkkaFLJBHAHG_20 (original name was: gnl|Prokka|FLJBHAHG_20); gnlProkkaFLJBHAHG_21 (original name was: gnl|Prokka|FLJBHAHG_21); gnlProkkaFLJBHAHG_22 (original name was: gnl|Prokka|FLJBHAHG_22); gnlProkkaFLJBHAHG_23 (original name was: gnl|Prokka|FLJBHAHG_23); gnlProkkaFLJBHAHG_24 (original name was: gnl|Prokka|FLJBHAHG_24)

Compact view

gnlProkkaFLJBHAHG_11 - Region 1 - T3PKS

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Location: 214,177 - 255,343 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

NRPS/PKS domains

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFLJBHAHG_17 - Region 1 - RiPP-like

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Location: 73,877 - 85,973 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaFLJBHAHG_19 - Region 1 - RiPP-like

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Location: 102,272 - 112,472 nt. (total: 10,201 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFLJBHAHG_19 - Region 2 - RiPP-like

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Location: 179,720 - 198,576 nt. (total: 18,857 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.