Rank Genome ID Species Strain BioSample ID Date Location Host Allelic distance ARGs VFs PGs PPRS 1 GCA_009719515.1 Parabacteroides merdae BIOML-A28 SAMN11946264 2016-02-19 USA Homo sapiens 0 4 0 1 4.12 2 GCA_009719555.1 Parabacteroides merdae BIOML-A29 SAMN11946265 2016-02-19 USA Homo sapiens 1 4 0 1 4.12 3 GCA_009719605.1 Parabacteroides merdae BIOML-A27 SAMN11946263 2016-02-19 USA Homo sapiens 15 4 0 1 4.12 4 GCA_022733635.1 Parabacteroides merdae Map_8_012 SAMN20302118 2016-09-19 Mozambique Homo sapiens 35 0 0 1 1.00 5 GCA_958432745.1 Parabacteroides merdae SRR17382092_bin.15_MetaWRAP_v1.3_MAG SAMEA114066320 2019-12 - - 42 0 0 1 1.00 6 GCA_018784105.1 Parabacteroides merdae MCC685 SAMN12147421 - Ireland Homo sapiens 213 1 0 1 1.41 7 GCA_005844535.1 Parabacteroides merdae 1001175st1_A1 SAMN10863250 2016-03-14 USA Homo sapiens 264 6 0 1 6.08 8 GCA_015552245.1 Parabacteroides merdae 1001175B_160314_A1 SAMN15533086 2016-03-14 USA Homo sapiens 264 6 0 1 6.08 9 GCA_020563655.1 Parabacteroides merdae DFI.1.110 SAMN22167311 - USA Homo sapiens 311 2 0 1 2.24 10 GCA_022137325.1 Parabacteroides merdae DFI.1.88 SAMN24725983 - USA Homo sapiens 313 2 0 1 2.24 11 GCA_022138085.1 Parabacteroides merdae DFI.1.192 SAMN24725962 - USA Homo sapiens 313 2 0 1 2.24 12 GCA_024463475.1 Parabacteroides merdae DFI.1.92 SAMN28944483 - USA Homo sapiens 313 2 0 1 2.24 13 GCA_036849335.1 Parabacteroides merdae CTOTU30651 SAMN28751812 - - - 321 0 0 1 1.00 14 GCA_022734235.1 Parabacteroides merdae Map_77_010 SAMN20302087 2016-08-22 Mozambique Homo sapiens 331 0 0 1 1.00 15 GCA_948465985.1 Parabacteroides merdae SRR17684618_bin.62_metawrap_v1.3_MAG SAMEA112353645 2021-01-01 Canada - 363 0 0 1 1.00 16 GCA_009719975.1 Parabacteroides merdae BIOML-A6 SAMN11946242 2015-04-01 USA Homo sapiens 375 2 0 1 2.24 17 GCA_009720015.1 Parabacteroides merdae BIOML-A4 SAMN11946240 2015-04-01 USA Homo sapiens 375 2 0 1 2.24 18 GCA_009677855.1 Parabacteroides merdae BIOML-A1 SAMN11946237 2015-04-01 USA Homo sapiens 376 2 0 1 2.24 19 GCA_009719915.1 Parabacteroides merdae BIOML-A9 SAMN11946245 2015-04-01 USA Homo sapiens 376 2 0 1 2.24 20 GCA_009719945.1 Parabacteroides merdae BIOML-A7 SAMN11946243 2015-04-01 USA Homo sapiens 376 2 0 1 2.24 21 GCA_009719965.1 Parabacteroides merdae BIOML-A5 SAMN11946241 2015-04-01 USA Homo sapiens 376 2 0 1 2.24 22 GCA_009719865.1 Parabacteroides merdae BIOML-A11 SAMN11946247 2015-04-01 USA Homo sapiens 377 2 0 1 2.24 23 GCA_009720045.1 Parabacteroides merdae BIOML-A2 SAMN11946238 2015-04-01 USA Homo sapiens 377 2 0 1 2.24 24 GCA_959026335.1 Parabacteroides merdae SRR13494520_bin.54_MetaWRAP_v1.3_MAG SAMEA114096697 2018-01-17 USA - 377 0 0 1 1.00 25 GCA_034171025.1 Parabacteroides merdae SUG3465 SAMN37949450 2020 Canada swine 394 0 0 1 1.00 26 GCA_028326715.1 Parabacteroides merdae BSD2780120875st1_C2_BSD2780120875_150330 SAMN31322789 2015-03-30 USA Homo sapiens 418 4 0 1 4.12 27 GCA_015558445.1 Parabacteroides merdae BSD2780120875b_170604_B5 SAMN15532601 2017-06-04 USA Homo sapiens 420 4 0 1 4.12 28 GCA_028326955.1 Parabacteroides merdae BSD2780120875st1_D1_BSD2780120875b_170604 SAMN31322790 2017-06-04 USA Homo sapiens 420 4 0 1 4.12 29 GCA_028328355.1 Parabacteroides merdae RTP21484st1_E1_RTP21484_190118 SAMN31322803 2019-01-18 USA Homo sapiens 444 3 0 1 3.16 30 GCA_028328305.1 Parabacteroides merdae RTP21484st1_A7_RTP21484_190118 SAMN31322802 2019-01-18 USA Homo sapiens 445 3 0 1 3.16 31 GCA_958410745.1 Parabacteroides merdae ERR9322429_bin.14_MetaWRAP_v1.3_MAG SAMEA114060956 - - - 653 0 0 1 1.00 32 GCA_000433955.1 Parabacteroides merdae CAG:48 SAMEA3138585 - - - 659 0 0 1 1.00 33 GCA_022783065.1 Parabacteroides merdae SUG879 SAMN26526103 2019 Canada Sus scrofa domesticus 711 2 0 1 2.24 34 GCA_036837845.1 Parabacteroides merdae CTOTU13337 SAMN28751104 - - - 712 0 0 0 0.00 35 GCA_015555255.1 Parabacteroides merdae D52t1_170925_B4 SAMN15532560 2017-09-25 USA Homo sapiens 713 0 0 1 1.00 36 GCA_028326765.1 Parabacteroides merdae D52st1_G3_D52t1_170925 SAMN31322796 2017-09-25 USA Homo sapiens 713 0 0 1 1.00 37 GCA_028328455.1 Parabacteroides merdae D52st1_D10_D52t1_170925 SAMN31322795 2017-09-25 USA Homo sapiens 713 0 0 1 1.00 38 GCA_028328385.1 Parabacteroides merdae 1028st1_A4_1028SCRN_200821 SAMN31322781 2020-08-21 USA Homo sapiens 723 1 0 1 1.41 39 GCA_036837885.1 Parabacteroides merdae CTOTU13359 SAMN28751012 - - - 725 0 0 1 1.00 40 GCA_015553045.1 Parabacteroides merdae D53t1_180928_D7 SAMN15533003 2018-09-28 USA Homo sapiens 728 1 0 1 1.41 41 GCA_018289315.1 Parabacteroides merdae CL06T03C08 SAMN16451193 2009-05 USA Homo sapiens 728 1 0 1 1.41 42 GCA_014870605.1 Parabacteroides merdae COPD090 SAMN12905037 2015-04/2016-09 Australia Homo sapiens 734 0 0 1 1.00 43 GCA_015558865.1 Parabacteroides merdae 1001136B_160425_B1 SAMN15533221 2016-04-25 USA Homo sapiens 736 4 0 1 4.12 44 GCA_036552125.1 Parabacteroides merdae DOME_MAG_8922 SAMN38021852 - USA Homo sapiens 736 0 0 1 1.00 45 GCA_959019525.1 Parabacteroides merdae SRR20881974_bin.1_MetaWRAP_v1.3_MAG SAMEA114095515 2019-05-01 USA - 739 0 0 1 1.00 46 GCA_021411685.1 Parabacteroides merdae BJH_172 SAMN20148139 - USA Homo sapiens 744 3 0 1 3.16 47 GCA_027693525.1 Parabacteroides merdae OF25-24MHA SAMN31809681 2014-02-01 China Homo sapiens 744 4 0 1 4.12 48 GCA_022746615.1 Parabacteroides merdae Map_129_021 SAMN20301217 2017-10-22 Mozambique Homo sapiens 755 0 0 1 1.00 49 GCA_015547975.1 Parabacteroides merdae D54t1_190329_G1 SAMN15532705 2019-03-29 USA Homo sapiens 756 2 0 1 2.24 50 GCA_028328345.1 Parabacteroides merdae D54st1_H2_D54t1_190329 SAMN31322801 2019-03-29 USA Homo sapiens 756 2 0 1 2.24 51 GCA_003438825.1 Parabacteroides merdae OM06-16AC SAMN09736819 2013-12-01 China Homo sapiens 757 5 0 1 5.10 52 GCA_028326635.1 Parabacteroides merdae D54st1_C9_D54t1_190329 SAMN31322798 2019-03-29 USA Homo sapiens 757 2 0 1 2.24 53 GCA_028328395.1 Parabacteroides merdae D54st1_G7_D54t1_190329 SAMN31322800 2019-03-29 USA Homo sapiens 757 2 0 1 2.24 54 GCA_028328425.1 Parabacteroides merdae D54st1_A3_D54t1_190329 SAMN31322797 2019-03-29 USA Homo sapiens 757 2 0 1 2.24 55 GCA_934841295.1 Parabacteroides merdae MTG233_bin.35.fa SAMEA13566726 - - - 757 1 0 1 1.41 56 GCA_934841555.1 Parabacteroides merdae MTG232_bin.14.fa SAMEA13566651 - - - 757 1 0 1 1.41 57 GCA_934852715.1 Parabacteroides merdae MTG235_bin.14.fa SAMEA13566824 - - - 757 0 0 1 1.00 58 GCA_934854775.1 Parabacteroides merdae MTG237_bin.39.fa SAMEA13566987 - - - 757 1 0 1 1.41 59 GCA_934864295.1 Parabacteroides merdae MTG236_bin.17.fa SAMEA13566899 - - - 757 1 0 1 1.41 60 GCA_934871325.1 Parabacteroides merdae MTG240_bin.23.fa SAMEA13567126 - - - 757 0 0 1 1.00 61 GCA_934872915.1 Parabacteroides merdae MTG246_bin.22.fa SAMEA13567447 - - - 757 0 0 1 1.00 62 GCA_934876355.1 Parabacteroides merdae MTG239_bin.6.fa SAMEA13567058 - - - 757 1 0 1 1.41 63 GCA_934883205.1 Parabacteroides merdae MTG248_bin.24.fa SAMEA13567572 - - - 757 0 0 1 1.00 64 GCA_027686665.1 Parabacteroides merdae AF101-95 SAMN31807787 2014-02-01 China Homo sapiens 759 5 0 1 5.10 65 GCA_027686805.1 Parabacteroides merdae AF101-58 SAMN31807779 2014-02-01 China Homo sapiens 759 5 0 1 5.10 66 GCA_022735225.1 Parabacteroides merdae Map_7_009 SAMN20302021 2015-08-24 Mozambique Homo sapiens 760 0 0 1 1.00 67 GCA_934852545.1 Parabacteroides merdae MTG234_bin.63.fa SAMEA13566805 - - - 760 1 0 1 1.41 68 GCA_934875805.1 Parabacteroides merdae MTG247_bin.13.fa SAMEA13567497 - - - 764 1 0 1 1.41 69 GCA_934872035.1 Parabacteroides merdae MTG238_bin.2.fa SAMEA13566995 - - - 765 0 0 1 1.00 70 GCA_958404825.1 Parabacteroides merdae ERR10960871_bin.1_MetaWRAP_v1.3_MAG SAMEA114061391 2018 Kenya - 784 0 0 1 1.00 71 GCA_015547825.1 Parabacteroides merdae 1001713B170207_170306_F10 SAMN15532439 2017-03-06 USA Homo sapiens 786 2 0 1 2.24 72 GCA_028328525.1 Parabacteroides merdae 1001713st1_E11_1001713B170207_170306 SAMN31322777 2017-03-06 USA Homo sapiens 786 2 0 1 2.24 73 GCA_028328535.1 Parabacteroides merdae 1001713st1_B1_1001713B170131_170501 SAMN31322774 2017-05-01 USA Homo sapiens 786 2 0 1 2.24 74 GCA_026169675.1 Parabacteroides merdae bin_3_LilbubCat SAMN31537019 2022 USA Felis catus 787 0 0 1 1.00 75 GCA_028326665.1 Parabacteroides merdae 1001713st1_B7_1001713B170131_170501 SAMN31322775 2017-05-01 USA Homo sapiens 787 2 0 1 2.24 76 GCA_028326685.1 Parabacteroides merdae 1001713st1_C2_1001713B170214_170313 SAMN31322776 2017-03-13 USA Homo sapiens 787 2 0 1 2.24 77 GCA_028328445.1 Parabacteroides merdae 1001713st1_G4_1001713B170207_170306 SAMN31322780 2017-03-06 USA Homo sapiens 787 2 0 1 2.24 78 GCA_028328485.1 Parabacteroides merdae 1001713st1_E1_1001713B170214_170313 SAMN31322778 2017-03-13 USA Homo sapiens 787 2 0 1 2.24 79 GCA_028326725.1 Parabacteroides merdae 1001713st1_F6_1001713B170221_170320 SAMN31322779 2017-03-20 USA Homo sapiens 794 2 0 1 2.24 80 GCA_015548105.1 Parabacteroides merdae 1001095IJ_161003_F2 SAMN15533152 2016-10-03 USA Homo sapiens 799 2 0 1 2.24 81 GCA_945828235.1 Parabacteroides merdae SRR5240731_bin.12_metaWRAP_v1.3_MAG SAMEA110360202 2016-08-01 Germany - 799 0 0 1 1.00 82 GCA_945864955.1 Parabacteroides merdae ERR1855551_bin.8_metaWRAP_v1.3_MAG SAMEA110402234 2016-08-01 Germany - 799 0 0 1 1.00 83 GCA_028328565.1 Parabacteroides merdae 1001713st1_A4_1001713B170221_170320 SAMN31322773 2017-03-20 USA Homo sapiens 800 2 0 1 2.24 84 GCA_028328905.1 Parabacteroides merdae 1001095st1_A4_1001095IJ_161003 SAMN31322756 2016-10-03 USA Homo sapiens 800 2 0 1 2.24 85 GCA_022785315.1 Parabacteroides merdae SUG938 SAMN26526162 2019 Canada Sus scrofa domesticus 803 2 0 1 2.24 86 GCA_958370885.1 Parabacteroides merdae SRR17798048_bin.12_MetaWRAP_v1.3_MAG SAMEA114066098 2020-04/2020-11 China - 813 0 0 1 1.00 87 GCA_000307495.1 Parabacteroides merdae CL09T00C40 CL09T00C40 SAMN02463942 - - Homo sapiens 815 1 0 1 1.41 88 GCA_020091365.1 Parabacteroides merdae BFG-280 SAMN15546958 1989 USA Homo sapiens 818 7 0 1 7.07 89 GCA_003474345.1 Parabacteroides merdae AF38-4 SAMN09734677 2014-02-01 China Homo sapiens 826 2 0 1 2.24 90 GCA_001404575.1 Parabacteroides merdae 2789STDY5834848 SAMEA3545314 2013 United Kingdom Homo sapiens 827 0 0 1 1.00 91 GCA_902362625.1 Parabacteroides merdae MGYG-HGUT-00044 SAMEA5849545 - United Kingdom - 827 0 0 1 1.00 92 GCA_003503315.1 Parabacteroides merdae UBA11761 SAMN08019002 - - - 832 0 0 1 1.00 93 GCA_959023305.1 Parabacteroides merdae DRR221351_bin.34_MetaWRAP_v1.3_MAG SAMEA114096365 2018 China - 833 0 0 1 1.00 94 GCA_028328885.1 Parabacteroides merdae 1001262st1_E8_1001262B_160229 SAMN31322757 2016-02-29 USA Homo sapiens 834 1 0 1 1.41 95 GCA_028328505.1 Parabacteroides merdae D35st1_A5_D35t1_190705 SAMN31322793 2019-07-05 USA Homo sapiens 835 2 0 1 2.24 96 GCA_910577545.1 Parabacteroides merdae MGBC103592 SAMEA8805027 - China - 835 1 0 1 1.41 97 GCA_949902765.1 Parabacteroides merdae MGG12699_1680015504 SAMEA112936375 2017-10-25 China - 835 1 0 1 1.41 98 GCA_003458945.1 Parabacteroides merdae AF26-22BH SAMN09734513 2013-12-01 China Homo sapiens 836 2 0 1 2.24 99 GCA_003475825.1 Parabacteroides merdae AF31-17 SAMN09734575 2014-01-01 China Homo sapiens 836 4 0 1 4.12 100 GCA_015670365.1 Parabacteroides merdae 1001262B_160229_F9 SAMN15533105 2016-02-29 USA Homo sapiens 836 1 0 1 1.41