Rank Genome ID Species Strain BioSample ID Date Location Host Allelic distance ARGs VFs PGs PPRS 1 GCA_009719845.1 Parabacteroides merdae BIOML-A12 SAMN11946248 2015-01-07 USA Homo sapiens 0 1 0 1 1.41 2 GCA_009719685.1 Parabacteroides merdae BIOML-A22 SAMN11946258 2016-01-11 USA Homo sapiens 585 1 0 1 1.41 3 GCA_009719705.1 Parabacteroides merdae BIOML-A21 SAMN11946257 2015-09-05 USA Homo sapiens 590 1 0 1 1.41 4 GCA_009719815.1 Parabacteroides merdae BIOML-A16 SAMN11946252 2015-05-20 USA Homo sapiens 592 1 0 1 1.41 5 GCA_009719645.1 Parabacteroides merdae BIOML-A24 SAMN11946260 2016-05-12 USA Homo sapiens 593 1 0 1 1.41 6 GCA_009719725.1 Parabacteroides merdae BIOML-A18 SAMN11946254 2015-05-20 USA Homo sapiens 596 1 0 1 1.41 7 GCA_009719715.1 Parabacteroides merdae BIOML-A20 SAMN11946256 2015-05-20 USA Homo sapiens 599 1 0 1 1.41 8 GCA_009719765.1 Parabacteroides merdae BIOML-A19 SAMN11946255 2015-05-20 USA Homo sapiens 600 1 0 1 1.41 9 GCA_009719785.1 Parabacteroides merdae BIOML-A17 SAMN11946253 2015-05-20 USA Homo sapiens 600 1 0 1 1.41 10 GCA_009719805.1 Parabacteroides merdae BIOML-A15 SAMN11946251 2015-05-20 USA Homo sapiens 602 1 0 1 1.41 11 GCA_009719635.1 Parabacteroides merdae BIOML-A23 SAMN11946259 2016-05-12 USA Homo sapiens 604 1 0 1 1.41 12 GCA_021410265.1 Parabacteroides merdae BJH_5 SAMN20148011 - USA Homo sapiens 699 3 0 1 3.16 13 GCA_000307495.1 Parabacteroides merdae CL09T00C40 CL09T00C40 SAMN02463942 - - Homo sapiens 709 1 0 1 1.41 14 GCA_003474345.1 Parabacteroides merdae AF38-4 SAMN09734677 2014-02-01 China Homo sapiens 710 2 0 1 2.24 15 GCA_028328505.1 Parabacteroides merdae D35st1_A5_D35t1_190705 SAMN31322793 2019-07-05 USA Homo sapiens 718 2 0 1 2.24 16 GCA_003475825.1 Parabacteroides merdae AF31-17 SAMN09734575 2014-01-01 China Homo sapiens 720 4 0 1 4.12 17 GCA_022835275.1 Parabacteroides merdae CE91-St3 SAMD00389890 2018-11-01 Japan Homo sapiens 721 2 0 1 2.24 18 GCA_958402135.1 Parabacteroides merdae ERR9492513_bin.11_MetaWRAP_v1.3_MAG SAMEA114063947 - - - 721 0 0 1 1.00 19 GCA_958417795.1 Parabacteroides merdae ERR9762700_bin.71_MetaWRAP_v1.3_MAG SAMEA114064420 2019 Sweden - 721 0 0 1 1.00 20 GCA_958434225.1 Parabacteroides merdae SRR22541672_bin.9_MetaWRAP_v1.3_MAG SAMEA114065286 2018-03-05 China - 721 0 0 1 1.00 21 GCA_020735605.1 Parabacteroides merdae FDAARGOS_1586 SAMN22091683 - USA - 722 1 0 1 1.41 22 GCA_022726515.1 Parabacteroides merdae Map_21_009 SAMN20301614 2015-05-13 Mozambique Homo sapiens 722 0 0 1 1.00 23 GCA_025151215.1 Parabacteroides merdae ATCC 43184 ATCC 43184 SAMN20222701 - - Homo sapiens 722 1 0 1 1.41 24 GCA_900445495.1 Parabacteroides merdae NCTC13052 SAMEA48404668 1900/1997 - - 722 1 0 1 1.41 25 GCA_000154105.1 Parabacteroides merdae ATCC 43184 ATCC 43184 SAMN00627057 - - Homo sapiens 723 2 0 1 2.24 26 GCA_958351535.1 Parabacteroides merdae ERR4918982_bin.16_MetaWRAP_v1.3_MAG SAMEA114062695 2019-02-12 China - 723 0 0 1 1.00 27 GCA_015668095.1 Parabacteroides merdae 1001270H_150608_G12 SAMN15533348 2015-06-08 USA Homo sapiens 724 3 0 1 3.16 28 GCA_024592595.1 Parabacteroides merdae GSH2021 SAMN30073203 - China Homo sapiens 724 5 0 1 5.10 29 GCA_003486345.1 Parabacteroides merdae UBA10754 SAMN08018394 - - - 725 0 0 1 1.00 30 GCA_024125345.1 Parabacteroides merdae NB2A-29-D6 SAMN28102043 2016-04 - Homo sapiens 725 3 0 1 3.16 31 GCA_009719905.1 Parabacteroides merdae BIOML-A8 SAMN11946244 2015-04-01 USA Homo sapiens 726 1 0 1 1.41 32 GCA_009720005.1 Parabacteroides merdae BIOML-A3 SAMN11946239 2015-04-01 USA Homo sapiens 726 1 0 1 1.41 33 GCA_022723475.1 Parabacteroides merdae Map_52_012 SAMN20301842 2016-06-21 Mozambique Homo sapiens 726 0 0 1 1.00 34 GCA_022745165.1 Parabacteroides merdae Map_20_009 SAMN20301567 2015-06-17 Mozambique Homo sapiens 726 0 0 1 1.00 35 GCA_946494615.1 Parabacteroides merdae ERR4304505_bin.61_MetaWRAP_v1.1_MAG SAMEA110702525 2019-10-15 Spain - 726 0 0 1 1.00 36 GCA_958443225.1 Parabacteroides merdae ERR9578215_bin.4_MetaWRAP_v1.3_MAG SAMEA114063045 2018 Germany - 726 1 0 1 1.41 37 GCA_959597205.1 Parabacteroides merdae SRR16280061_bin.36_MetaWRAP_v1.3_MAG SAMEA114122542 2019-05-01/2020-10-30 China - 726 0 0 1 1.00 38 GCA_022746415.1 Parabacteroides merdae Map_130_016 SAMN20301237 2017-08-21 Mozambique Homo sapiens 727 0 0 1 1.00 39 GCA_003507315.1 Parabacteroides merdae UBA11481 SAMN08018825 - - - 728 0 0 1 1.00 40 GCA_009719875.1 Parabacteroides merdae BIOML-A10 SAMN11946246 2015-04-01 USA Homo sapiens 728 1 0 1 1.41 41 GCA_003458945.1 Parabacteroides merdae AF26-22BH SAMN09734513 2013-12-01 China Homo sapiens 729 2 0 1 2.24 42 GCA_028326705.1 Parabacteroides merdae D35st1_A2_D35t1_190705 SAMN31322792 2019-07-05 USA Homo sapiens 729 2 0 1 2.24 43 GCA_015551905.1 Parabacteroides merdae D59t2_181005_G1 SAMN15532731 2018-10-05 USA Homo sapiens 730 1 0 1 1.41 44 GCA_001404575.1 Parabacteroides merdae 2789STDY5834848 SAMEA3545314 2013 United Kingdom Homo sapiens 740 0 0 1 1.00 45 GCA_022719835.1 Parabacteroides merdae CHE524_005 SAMN20300869 - USA Homo sapiens 740 0 0 1 1.00 46 GCA_902362625.1 Parabacteroides merdae MGYG-HGUT-00044 SAMEA5849545 - United Kingdom - 740 0 0 1 1.00 47 GCA_003503315.1 Parabacteroides merdae UBA11761 SAMN08019002 - - - 743 0 0 1 1.00 48 GCA_022721235.1 Parabacteroides merdae Map_116_023 SAMN20301106 2016-08-24 Mozambique Homo sapiens 745 0 0 1 1.00 49 GCA_022728305.1 Parabacteroides merdae Map_57_010 SAMN20301890 2017-02-22 Mozambique Homo sapiens 747 0 0 1 1.00 50 GCA_910577545.1 Parabacteroides merdae MGBC103592 SAMEA8805027 - China - 749 1 0 1 1.41 51 GCA_947368825.1 Parabacteroides merdae SRR15431195_bin.21_metawrap_v1.3_MAG SAMEA112147274 2021-02-01 China - 749 0 0 1 1.00 52 GCA_949902765.1 Parabacteroides merdae MGG12699_1680015504 SAMEA112936375 2017-10-25 China - 749 1 0 1 1.41 53 GCA_019733655.1 Parabacteroides merdae K34_1 SAMN14389557 2020-03-01 China Homo sapiens 751 4 0 1 4.12 54 GCA_959023305.1 Parabacteroides merdae DRR221351_bin.34_MetaWRAP_v1.3_MAG SAMEA114096365 2018 China - 752 0 0 1 1.00 55 GCA_028328885.1 Parabacteroides merdae 1001262st1_E8_1001262B_160229 SAMN31322757 2016-02-29 USA Homo sapiens 753 1 0 1 1.41 56 GCA_015670365.1 Parabacteroides merdae 1001262B_160229_F9 SAMN15533105 2016-02-29 USA Homo sapiens 754 1 0 1 1.41 57 GCA_036807005.1 Parabacteroides merdae CTOTU32100 SAMN28749760 - - - 754 1 0 1 1.41 58 GCA_034134505.1 Parabacteroides merdae S_657 SAMN37770249 - Denmark Homo sapiens 755 0 0 0 0.00 59 GCA_963557355.1 Parabacteroides merdae ERS329797__bin67 SAMEA114501434 2006 USA - 756 0 0 1 1.00 60 GCA_003469345.1 Parabacteroides merdae AM30-44 SAMN09736418 2013-12-01 China Homo sapiens 758 2 0 1 2.24 61 GCA_027686215.1 Parabacteroides merdae AF102-62 SAMN31807809 2014-02-01 China Homo sapiens 758 2 0 1 2.24 62 GCA_958370885.1 Parabacteroides merdae SRR17798048_bin.12_MetaWRAP_v1.3_MAG SAMEA114066098 2020-04/2020-11 China - 761 0 0 1 1.00 63 GCA_948955895.1 Parabacteroides merdae MGBC125402 SAMEA112398864 - China - 764 0 0 1 1.00 64 GCA_003540425.1 Parabacteroides merdae UBA9108 SAMN08019952 - - - 766 0 0 1 1.00 65 GCA_958435975.1 Parabacteroides merdae SRR18940302_bin.10_MetaWRAP_v1.3_MAG SAMEA114064873 2020 - - 771 0 0 1 1.00 66 GCA_003475305.1 Parabacteroides merdae AF33-34 SAMN09734606 2014-01-01 China Homo sapiens 772 3 0 1 3.16 67 GCA_019042155.1 Parabacteroides merdae DFI.4.154 SAMN19732234 - USA Homo sapiens 773 2 0 1 2.24 68 GCA_905192885.1 Parabacteroides merdae ERR1430520-bin.25 SAMEA7846734 - China - 773 0 0 1 1.00 69 GCA_022136865.1 Parabacteroides merdae DFI.4.164 SAMN24725996 - USA Homo sapiens 774 1 0 1 1.41 70 GCA_024463155.2 Parabacteroides merdae DFI.4.73 SAMN28944501 - USA Homo sapiens 774 1 0 1 1.41 71 GCA_948961025.1 Parabacteroides merdae MGBC123275 SAMEA112396761 - China - 783 0 0 0 0.00 72 GCA_959607325.1 Parabacteroides merdae SRR16244398_bin.24_MetaWRAP_v1.3_MAG SAMEA114095955 2020-11-03 Malaysia - 788 0 0 1 1.00 73 GCA_947071195.1 Parabacteroides merdae SRR13840124_bin.4_metawrap_v1.3_MAG SAMEA111477099 - USA - 796 0 0 0 0.00 74 GCA_947507315.1 Parabacteroides merdae SRR13753901_bin.1_metawrap_v1.3_MAG SAMEA112181798 2019-07-02 USA - 859 0 0 1 1.00 75 GCA_024791515.1 Parabacteroides merdae BFG-550 SAMN30323439 2008-03-12 USA Homo sapiens 868 6 0 0 6.00 76 GCA_022731965.1 Parabacteroides merdae Map_89_018 SAMN20302200 2016-03-10 Mozambique Homo sapiens 871 0 0 1 1.00 77 GCA_022720235.1 Parabacteroides merdae CHE518_007 SAMN20300850 - USA Homo sapiens 874 1 5 2 5.48 78 GCA_036837845.1 Parabacteroides merdae CTOTU13337 SAMN28751104 - - - 875 0 0 0 0.00 79 GCA_036807045.1 Parabacteroides merdae CTOTU30069 SAMN28749740 - - - 876 0 0 0 0.00 80 GCA_949297745.1 Parabacteroides merdae Batch3_idba_bin.620 SAMEA112663287 - Ethiopia - 889 0 0 1 1.00 81 GCA_022735225.1 Parabacteroides merdae Map_7_009 SAMN20302021 2015-08-24 Mozambique Homo sapiens 899 0 0 1 1.00 82 GCA_022737295.1 Parabacteroides merdae Map_68_015 SAMN20302001 2016-07-25 Mozambique Homo sapiens 899 0 0 1 1.00 83 GCA_022746615.1 Parabacteroides merdae Map_129_021 SAMN20301217 2017-10-22 Mozambique Homo sapiens 899 0 0 1 1.00 84 GCA_000433955.1 Parabacteroides merdae CAG:48 SAMEA3138585 - - - 906 0 0 1 1.00 85 GCA_014870605.1 Parabacteroides merdae COPD090 SAMN12905037 2015-04/2016-09 Australia Homo sapiens 906 0 0 1 1.00 86 GCA_958404825.1 Parabacteroides merdae ERR10960871_bin.1_MetaWRAP_v1.3_MAG SAMEA114061391 2018 Kenya - 906 0 0 1 1.00 87 GCA_036849335.1 Parabacteroides merdae CTOTU30651 SAMN28751812 - - - 907 0 0 1 1.00 88 GCA_028326725.1 Parabacteroides merdae 1001713st1_F6_1001713B170221_170320 SAMN31322779 2017-03-20 USA Homo sapiens 909 2 0 1 2.24 89 GCA_020091365.1 Parabacteroides merdae BFG-280 SAMN15546958 1989 USA Homo sapiens 910 7 0 1 7.07 90 GCA_036552125.1 Parabacteroides merdae DOME_MAG_8922 SAMN38021852 - USA Homo sapiens 911 0 0 1 1.00 91 GCA_948465985.1 Parabacteroides merdae SRR17684618_bin.62_metawrap_v1.3_MAG SAMEA112353645 2021-01-01 Canada - 911 0 0 1 1.00 92 GCA_003438825.1 Parabacteroides merdae OM06-16AC SAMN09736819 2013-12-01 China Homo sapiens 912 5 0 1 5.10 93 GCA_015558865.1 Parabacteroides merdae 1001136B_160425_B1 SAMN15533221 2016-04-25 USA Homo sapiens 912 4 0 1 4.12 94 GCA_018784105.1 Parabacteroides merdae MCC685 SAMN12147421 - Ireland Homo sapiens 912 1 0 1 1.41 95 GCA_022733635.1 Parabacteroides merdae Map_8_012 SAMN20302118 2016-09-19 Mozambique Homo sapiens 912 0 0 1 1.00 96 GCA_028328565.1 Parabacteroides merdae 1001713st1_A4_1001713B170221_170320 SAMN31322773 2017-03-20 USA Homo sapiens 912 2 0 1 2.24 97 GCA_015547825.1 Parabacteroides merdae 1001713B170207_170306_F10 SAMN15532439 2017-03-06 USA Homo sapiens 913 2 0 1 2.24 98 GCA_028326665.1 Parabacteroides merdae 1001713st1_B7_1001713B170131_170501 SAMN31322775 2017-05-01 USA Homo sapiens 913 2 0 1 2.24 99 GCA_028326685.1 Parabacteroides merdae 1001713st1_C2_1001713B170214_170313 SAMN31322776 2017-03-13 USA Homo sapiens 913 2 0 1 2.24 100 GCA_028328445.1 Parabacteroides merdae 1001713st1_G4_1001713B170207_170306 SAMN31322780 2017-03-06 USA Homo sapiens 913 2 0 1 2.24