GCA_009881535.1 - 10 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEOGDNDGO_81 (original name was: gnl|Prokka|EOGDNDGO_81)

Region	Type	From	To	Most similar known cluster		Similarity
Region 81.1	lanthipeptide-class-ii	1	14,322

gnlProkkaEOGDNDGO_90 (original name was: gnl|Prokka|EOGDNDGO_90)

Region	Type	From	To	Most similar known cluster		Similarity
Region 90.1	NRPS	3,868	52,852	dipeptide aldehydes	NRP	88%

gnlProkkaEOGDNDGO_98 (original name was: gnl|Prokka|EOGDNDGO_98)

Region	Type	From	To	Most similar known cluster		Similarity
Region 98.1	ranthipeptide	41,310	62,898

gnlProkkaEOGDNDGO_105 (original name was: gnl|Prokka|EOGDNDGO_105)

Region	Type	From	To	Most similar known cluster		Similarity
Region 105.1	cyclic-lactone-autoinducer	22,803	40,352

gnlProkkaEOGDNDGO_119 (original name was: gnl|Prokka|EOGDNDGO_119)

Region	Type	From	To	Most similar known cluster		Similarity
Region 119.1	lanthipeptide-class-ii	1	15,007	xantholipin	Polyketide	4%
Region 119.2	cyclic-lactone-autoinducer	17,120	28,139

gnlProkkaEOGDNDGO_142 (original name was: gnl|Prokka|EOGDNDGO_142)

Region	Type	From	To	Most similar known cluster		Similarity
Region 142.1	cyclic-lactone-autoinducer	1	11,161

gnlProkkaEOGDNDGO_146 (original name was: gnl|Prokka|EOGDNDGO_146)

Region	Type	From	To	Most similar known cluster		Similarity
Region 146.1	cyclic-lactone-autoinducer	1	14,331

gnlProkkaEOGDNDGO_147 (original name was: gnl|Prokka|EOGDNDGO_147)

Region	Type	From	To	Most similar known cluster		Similarity
Region 147.1	RRE-containing	2,424	13,784

gnlProkkaEOGDNDGO_154 (original name was: gnl|Prokka|EOGDNDGO_154)

Region	Type	From	To	Most similar known cluster		Similarity
Region 154.1	cyclic-lactone-autoinducer	1	11,296

Region	Type	From	To	Most similar known cluster	Similarity
Region 81.1	lanthipeptide-class-ii	1	14,322
Region 90.1	NRPS	3,868	52,852	dipeptide aldehydes	NRP	88%
Region 98.1	ranthipeptide	41,310	62,898
Region 105.1	cyclic-lactone-autoinducer	22,803	40,352
Region 119.1	lanthipeptide-class-ii	1	15,007	xantholipin	Polyketide	4%
Region 119.2	cyclic-lactone-autoinducer	17,120	28,139
Region 142.1	cyclic-lactone-autoinducer	1	11,161
Region 146.1	cyclic-lactone-autoinducer	1	14,331
Region 147.1	RRE-containing	2,424	13,784
Region 154.1	cyclic-lactone-autoinducer	1	11,296

No secondary metabolite regions were found in these records:: gnlProkkaEOGDNDGO_1 (original name was: gnl|Prokka|EOGDNDGO_1); gnlProkkaEOGDNDGO_2 (original name was: gnl|Prokka|EOGDNDGO_2); gnlProkkaEOGDNDGO_3 (original name was: gnl|Prokka|EOGDNDGO_3); gnlProkkaEOGDNDGO_4 (original name was: gnl|Prokka|EOGDNDGO_4); gnlProkkaEOGDNDGO_5 (original name was: gnl|Prokka|EOGDNDGO_5); gnlProkkaEOGDNDGO_6 (original name was: gnl|Prokka|EOGDNDGO_6); gnlProkkaEOGDNDGO_7 (original name was: gnl|Prokka|EOGDNDGO_7); gnlProkkaEOGDNDGO_8 (original name was: gnl|Prokka|EOGDNDGO_8); gnlProkkaEOGDNDGO_9 (original name was: gnl|Prokka|EOGDNDGO_9); gnlProkkaEOGDNDGO_10 (original name was: gnl|Prokka|EOGDNDGO_10); gnlProkkaEOGDNDGO_11 (original name was: gnl|Prokka|EOGDNDGO_11); gnlProkkaEOGDNDGO_12 (original name was: gnl|Prokka|EOGDNDGO_12); gnlProkkaEOGDNDGO_13 (original name was: gnl|Prokka|EOGDNDGO_13); gnlProkkaEOGDNDGO_14 (original name was: gnl|Prokka|EOGDNDGO_14); gnlProkkaEOGDNDGO_15 (original name was: gnl|Prokka|EOGDNDGO_15); gnlProkkaEOGDNDGO_16 (original name was: gnl|Prokka|EOGDNDGO_16); gnlProkkaEOGDNDGO_17 (original name was: gnl|Prokka|EOGDNDGO_17); gnlProkkaEOGDNDGO_18 (original name was: gnl|Prokka|EOGDNDGO_18); gnlProkkaEOGDNDGO_19 (original name was: gnl|Prokka|EOGDNDGO_19); gnlProkkaEOGDNDGO_20 (original name was: gnl|Prokka|EOGDNDGO_20); gnlProkkaEOGDNDGO_21 (original name was: gnl|Prokka|EOGDNDGO_21); gnlProkkaEOGDNDGO_22 (original name was: gnl|Prokka|EOGDNDGO_22); gnlProkkaEOGDNDGO_23 (original name was: gnl|Prokka|EOGDNDGO_23); gnlProkkaEOGDNDGO_24 (original name was: gnl|Prokka|EOGDNDGO_24); gnlProkkaEOGDNDGO_25 (original name was: gnl|Prokka|EOGDNDGO_25); gnlProkkaEOGDNDGO_26 (original name was: gnl|Prokka|EOGDNDGO_26); gnlProkkaEOGDNDGO_27 (original name was: gnl|Prokka|EOGDNDGO_27); gnlProkkaEOGDNDGO_28 (original name was: gnl|Prokka|EOGDNDGO_28); gnlProkkaEOGDNDGO_29 (original name was: gnl|Prokka|EOGDNDGO_29); gnlProkkaEOGDNDGO_30 (original name was: gnl|Prokka|EOGDNDGO_30); gnlProkkaEOGDNDGO_31 (original name was: gnl|Prokka|EOGDNDGO_31); gnlProkkaEOGDNDGO_32 (original name was: gnl|Prokka|EOGDNDGO_32); gnlProkkaEOGDNDGO_33 (original name was: gnl|Prokka|EOGDNDGO_33); gnlProkkaEOGDNDGO_34 (original name was: gnl|Prokka|EOGDNDGO_34); gnlProkkaEOGDNDGO_35 (original name was: gnl|Prokka|EOGDNDGO_35); gnlProkkaEOGDNDGO_36 (original name was: gnl|Prokka|EOGDNDGO_36); gnlProkkaEOGDNDGO_37 (original name was: gnl|Prokka|EOGDNDGO_37); gnlProkkaEOGDNDGO_38 (original name was: gnl|Prokka|EOGDNDGO_38); gnlProkkaEOGDNDGO_39 (original name was: gnl|Prokka|EOGDNDGO_39); gnlProkkaEOGDNDGO_40 (original name was: gnl|Prokka|EOGDNDGO_40); gnlProkkaEOGDNDGO_41 (original name was: gnl|Prokka|EOGDNDGO_41); gnlProkkaEOGDNDGO_42 (original name was: gnl|Prokka|EOGDNDGO_42); gnlProkkaEOGDNDGO_43 (original name was: gnl|Prokka|EOGDNDGO_43); gnlProkkaEOGDNDGO_44 (original name was: gnl|Prokka|EOGDNDGO_44); gnlProkkaEOGDNDGO_45 (original name was: gnl|Prokka|EOGDNDGO_45); gnlProkkaEOGDNDGO_46 (original name was: gnl|Prokka|EOGDNDGO_46); gnlProkkaEOGDNDGO_47 (original name was: gnl|Prokka|EOGDNDGO_47); gnlProkkaEOGDNDGO_48 (original name was: gnl|Prokka|EOGDNDGO_48); gnlProkkaEOGDNDGO_49 (original name was: gnl|Prokka|EOGDNDGO_49); gnlProkkaEOGDNDGO_50 (original name was: gnl|Prokka|EOGDNDGO_50); gnlProkkaEOGDNDGO_51 (original name was: gnl|Prokka|EOGDNDGO_51); gnlProkkaEOGDNDGO_52 (original name was: gnl|Prokka|EOGDNDGO_52); gnlProkkaEOGDNDGO_53 (original name was: gnl|Prokka|EOGDNDGO_53); gnlProkkaEOGDNDGO_54 (original name was: gnl|Prokka|EOGDNDGO_54); gnlProkkaEOGDNDGO_55 (original name was: gnl|Prokka|EOGDNDGO_55); gnlProkkaEOGDNDGO_56 (original name was: gnl|Prokka|EOGDNDGO_56); gnlProkkaEOGDNDGO_57 (original name was: gnl|Prokka|EOGDNDGO_57); gnlProkkaEOGDNDGO_58 (original name was: gnl|Prokka|EOGDNDGO_58); gnlProkkaEOGDNDGO_59 (original name was: gnl|Prokka|EOGDNDGO_59); gnlProkkaEOGDNDGO_60 (original name was: gnl|Prokka|EOGDNDGO_60); gnlProkkaEOGDNDGO_61 (original name was: gnl|Prokka|EOGDNDGO_61); gnlProkkaEOGDNDGO_62 (original name was: gnl|Prokka|EOGDNDGO_62); gnlProkkaEOGDNDGO_63 (original name was: gnl|Prokka|EOGDNDGO_63); gnlProkkaEOGDNDGO_64 (original name was: gnl|Prokka|EOGDNDGO_64); gnlProkkaEOGDNDGO_65 (original name was: gnl|Prokka|EOGDNDGO_65); gnlProkkaEOGDNDGO_66 (original name was: gnl|Prokka|EOGDNDGO_66); gnlProkkaEOGDNDGO_67 (original name was: gnl|Prokka|EOGDNDGO_67); gnlProkkaEOGDNDGO_68 (original name was: gnl|Prokka|EOGDNDGO_68); gnlProkkaEOGDNDGO_69 (original name was: gnl|Prokka|EOGDNDGO_69); gnlProkkaEOGDNDGO_70 (original name was: gnl|Prokka|EOGDNDGO_70); gnlProkkaEOGDNDGO_71 (original name was: gnl|Prokka|EOGDNDGO_71); gnlProkkaEOGDNDGO_72 (original name was: gnl|Prokka|EOGDNDGO_72); gnlProkkaEOGDNDGO_73 (original name was: gnl|Prokka|EOGDNDGO_73); gnlProkkaEOGDNDGO_74 (original name was: gnl|Prokka|EOGDNDGO_74); gnlProkkaEOGDNDGO_75 (original name was: gnl|Prokka|EOGDNDGO_75); gnlProkkaEOGDNDGO_76 (original name was: gnl|Prokka|EOGDNDGO_76); gnlProkkaEOGDNDGO_77 (original name was: gnl|Prokka|EOGDNDGO_77); gnlProkkaEOGDNDGO_78 (original name was: gnl|Prokka|EOGDNDGO_78); gnlProkkaEOGDNDGO_79 (original name was: gnl|Prokka|EOGDNDGO_79); gnlProkkaEOGDNDGO_80 (original name was: gnl|Prokka|EOGDNDGO_80); gnlProkkaEOGDNDGO_82 (original name was: gnl|Prokka|EOGDNDGO_82); gnlProkkaEOGDNDGO_83 (original name was: gnl|Prokka|EOGDNDGO_83); gnlProkkaEOGDNDGO_84 (original name was: gnl|Prokka|EOGDNDGO_84); gnlProkkaEOGDNDGO_85 (original name was: gnl|Prokka|EOGDNDGO_85); gnlProkkaEOGDNDGO_86 (original name was: gnl|Prokka|EOGDNDGO_86); gnlProkkaEOGDNDGO_87 (original name was: gnl|Prokka|EOGDNDGO_87); gnlProkkaEOGDNDGO_88 (original name was: gnl|Prokka|EOGDNDGO_88); gnlProkkaEOGDNDGO_89 (original name was: gnl|Prokka|EOGDNDGO_89); gnlProkkaEOGDNDGO_91 (original name was: gnl|Prokka|EOGDNDGO_91); gnlProkkaEOGDNDGO_92 (original name was: gnl|Prokka|EOGDNDGO_92); gnlProkkaEOGDNDGO_93 (original name was: gnl|Prokka|EOGDNDGO_93); gnlProkkaEOGDNDGO_94 (original name was: gnl|Prokka|EOGDNDGO_94); gnlProkkaEOGDNDGO_95 (original name was: gnl|Prokka|EOGDNDGO_95); gnlProkkaEOGDNDGO_96 (original name was: gnl|Prokka|EOGDNDGO_96); gnlProkkaEOGDNDGO_97 (original name was: gnl|Prokka|EOGDNDGO_97); gnlProkkaEOGDNDGO_99 (original name was: gnl|Prokka|EOGDNDGO_99); gnlProkkaEOGDNDGO_100 (original name was: gnl|Prokka|EOGDNDGO_100); gnlProkkaEOGDNDGO_101 (original name was: gnl|Prokka|EOGDNDGO_101); gnlProkkaEOGDNDGO_102 (original name was: gnl|Prokka|EOGDNDGO_102); gnlProkkaEOGDNDGO_103 (original name was: gnl|Prokka|EOGDNDGO_103); gnlProkkaEOGDNDGO_104 (original name was: gnl|Prokka|EOGDNDGO_104); gnlProkkaEOGDNDGO_106 (original name was: gnl|Prokka|EOGDNDGO_106); gnlProkkaEOGDNDGO_107 (original name was: gnl|Prokka|EOGDNDGO_107); gnlProkkaEOGDNDGO_108 (original name was: gnl|Prokka|EOGDNDGO_108); gnlProkkaEOGDNDGO_109 (original name was: gnl|Prokka|EOGDNDGO_109); gnlProkkaEOGDNDGO_110 (original name was: gnl|Prokka|EOGDNDGO_110); gnlProkkaEOGDNDGO_111 (original name was: gnl|Prokka|EOGDNDGO_111); gnlProkkaEOGDNDGO_112 (original name was: gnl|Prokka|EOGDNDGO_112); gnlProkkaEOGDNDGO_113 (original name was: gnl|Prokka|EOGDNDGO_113); gnlProkkaEOGDNDGO_114 (original name was: gnl|Prokka|EOGDNDGO_114); gnlProkkaEOGDNDGO_115 (original name was: gnl|Prokka|EOGDNDGO_115); gnlProkkaEOGDNDGO_116 (original name was: gnl|Prokka|EOGDNDGO_116); gnlProkkaEOGDNDGO_117 (original name was: gnl|Prokka|EOGDNDGO_117); gnlProkkaEOGDNDGO_118 (original name was: gnl|Prokka|EOGDNDGO_118); gnlProkkaEOGDNDGO_120 (original name was: gnl|Prokka|EOGDNDGO_120); gnlProkkaEOGDNDGO_121 (original name was: gnl|Prokka|EOGDNDGO_121); gnlProkkaEOGDNDGO_122 (original name was: gnl|Prokka|EOGDNDGO_122); gnlProkkaEOGDNDGO_123 (original name was: gnl|Prokka|EOGDNDGO_123); gnlProkkaEOGDNDGO_124 (original name was: gnl|Prokka|EOGDNDGO_124); gnlProkkaEOGDNDGO_125 (original name was: gnl|Prokka|EOGDNDGO_125); gnlProkkaEOGDNDGO_126 (original name was: gnl|Prokka|EOGDNDGO_126); gnlProkkaEOGDNDGO_127 (original name was: gnl|Prokka|EOGDNDGO_127); gnlProkkaEOGDNDGO_128 (original name was: gnl|Prokka|EOGDNDGO_128); gnlProkkaEOGDNDGO_129 (original name was: gnl|Prokka|EOGDNDGO_129); gnlProkkaEOGDNDGO_130 (original name was: gnl|Prokka|EOGDNDGO_130); gnlProkkaEOGDNDGO_131 (original name was: gnl|Prokka|EOGDNDGO_131); gnlProkkaEOGDNDGO_132 (original name was: gnl|Prokka|EOGDNDGO_132); gnlProkkaEOGDNDGO_133 (original name was: gnl|Prokka|EOGDNDGO_133); gnlProkkaEOGDNDGO_134 (original name was: gnl|Prokka|EOGDNDGO_134); gnlProkkaEOGDNDGO_135 (original name was: gnl|Prokka|EOGDNDGO_135); gnlProkkaEOGDNDGO_136 (original name was: gnl|Prokka|EOGDNDGO_136); gnlProkkaEOGDNDGO_137 (original name was: gnl|Prokka|EOGDNDGO_137); gnlProkkaEOGDNDGO_138 (original name was: gnl|Prokka|EOGDNDGO_138); gnlProkkaEOGDNDGO_139 (original name was: gnl|Prokka|EOGDNDGO_139); gnlProkkaEOGDNDGO_140 (original name was: gnl|Prokka|EOGDNDGO_140); gnlProkkaEOGDNDGO_141 (original name was: gnl|Prokka|EOGDNDGO_141); gnlProkkaEOGDNDGO_143 (original name was: gnl|Prokka|EOGDNDGO_143); gnlProkkaEOGDNDGO_144 (original name was: gnl|Prokka|EOGDNDGO_144); gnlProkkaEOGDNDGO_145 (original name was: gnl|Prokka|EOGDNDGO_145); gnlProkkaEOGDNDGO_148 (original name was: gnl|Prokka|EOGDNDGO_148); gnlProkkaEOGDNDGO_149 (original name was: gnl|Prokka|EOGDNDGO_149); gnlProkkaEOGDNDGO_150 (original name was: gnl|Prokka|EOGDNDGO_150); gnlProkkaEOGDNDGO_151 (original name was: gnl|Prokka|EOGDNDGO_151); gnlProkkaEOGDNDGO_152 (original name was: gnl|Prokka|EOGDNDGO_152); gnlProkkaEOGDNDGO_153 (original name was: gnl|Prokka|EOGDNDGO_153); gnlProkkaEOGDNDGO_155 (original name was: gnl|Prokka|EOGDNDGO_155); gnlProkkaEOGDNDGO_156 (original name was: gnl|Prokka|EOGDNDGO_156); gnlProkkaEOGDNDGO_157 (original name was: gnl|Prokka|EOGDNDGO_157); gnlProkkaEOGDNDGO_158 (original name was: gnl|Prokka|EOGDNDGO_158); gnlProkkaEOGDNDGO_159 (original name was: gnl|Prokka|EOGDNDGO_159); gnlProkkaEOGDNDGO_160 (original name was: gnl|Prokka|EOGDNDGO_160); gnlProkkaEOGDNDGO_161 (original name was: gnl|Prokka|EOGDNDGO_161); gnlProkkaEOGDNDGO_162 (original name was: gnl|Prokka|EOGDNDGO_162); gnlProkkaEOGDNDGO_163 (original name was: gnl|Prokka|EOGDNDGO_163); gnlProkkaEOGDNDGO_164 (original name was: gnl|Prokka|EOGDNDGO_164); gnlProkkaEOGDNDGO_165 (original name was: gnl|Prokka|EOGDNDGO_165); gnlProkkaEOGDNDGO_166 (original name was: gnl|Prokka|EOGDNDGO_166); gnlProkkaEOGDNDGO_167 (original name was: gnl|Prokka|EOGDNDGO_167); gnlProkkaEOGDNDGO_168 (original name was: gnl|Prokka|EOGDNDGO_168); gnlProkkaEOGDNDGO_169 (original name was: gnl|Prokka|EOGDNDGO_169); gnlProkkaEOGDNDGO_170 (original name was: gnl|Prokka|EOGDNDGO_170); gnlProkkaEOGDNDGO_171 (original name was: gnl|Prokka|EOGDNDGO_171); gnlProkkaEOGDNDGO_172 (original name was: gnl|Prokka|EOGDNDGO_172); gnlProkkaEOGDNDGO_173 (original name was: gnl|Prokka|EOGDNDGO_173)

Compact view

gnlProkkaEOGDNDGO_81 - Region 1 - lanthipeptide-class-ii

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Location: 1 - 14,322 nt. (total: 14,322 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaEOGDNDGO_90 - Region 1 - NRPS

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Location: 3,868 - 52,852 nt. (total: 48,985 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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resistance

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Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

Module view

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NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 3867 - 52852:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg90_23

AMP-binding (20..419): X

nrpys: Leu, Trp

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Tiny, hydrophilic, transition to aliphatic (Gly, Ala)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVLTDGGISK
Nearest Stachelhaus code(s):: Leu or Trp DVLTDGGISK (100% 8Å match)
Stachelhaus code match:: 100% (strong)

AMP-binding (1033..1421): X

nrpys: Leu, Trp

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
Small clusters prediction:: Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAMFSGAIFK
Nearest Stachelhaus code(s):: Leu or Trp DAMFSGAIFK (100% 8Å match)
Stachelhaus code match:: 100% (strong)

AMP-binding (2027..2418): X

nrpys: Leu, Trp

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAITTGGVSK
Nearest Stachelhaus code(s):: Leu or Trp DAITTGGVSK (100% 8Å match)
Stachelhaus code match:: 100% (strong)

gnlProkkaEOGDNDGO_98 - Region 1 - ranthipeptide

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Location: 41,310 - 62,898 nt. (total: 21,589 nt) Show pHMM detection rules used

Region on contig edge.

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

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core biosynthetic genes

additional biosynthetic genes

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEOGDNDGO_105 - Region 1 - cyclic-lactone-autoinducer

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Location: 22,803 - 40,352 nt. (total: 17,550 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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gnlProkkaEOGDNDGO_119 - Region 1 - lanthipeptide-class-ii

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Location: 1 - 15,007 nt. (total: 15,007 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

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core biosynthetic genes

additional biosynthetic genes

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KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Similar known gene clusters from MIBiG 3.1

Lanthipeptide predictions

Lanthipeptide(s) for ctg119_2

ctg119_5

Leader:

MKTCSERNEQRINSLQLSESLEDEIKELDGKNVEAGDVIFT

Core:

TDTSSFLTIVCC

Core with dehydrations:

DhbDDhbDhaDhaFLDhbIVCysCys

antiSMASH-DB 4.0 matches for ctg119_5

100.0% NZ_CP102267.1and 2 others:

NZ_JADMOE010000006.1 Lanthipeptides: I2G55_RS05425_lanthipeptideNZ_LT635469.1 Lanthipeptides: BQ7352_RS14540_lanthipeptide

Lanthipeptides: NQ550_RS10225_lanthipeptide

1

TDTSSFLTIVCC

12

TDTSSFLTIVCC

1

TDTSSFLTIVCC

12

50.0% NZ_CP113781.1: Lanthipeptides: GGADHKLB_RS14125_lanthipeptide

2

DTSSFLTIVCC

12

+ + FLTI+CC

2

NCTHFLTILCC

12

40.0% NZ_AP025566.1: Lanthipeptides: MWL92_RS00840_lanthipeptide

4

SSFLTIVCC

12

+SF TI+CC

7

TSFCTIICC

15

with 10 more sequence matches

33.3% NZ_CP036524.1: Lanthipeptides: LAJLEIBI_RS18025_lanthipeptide

4

SSFLTIVCC

12

++F TI+CC

7

TTFFTIICC

15

31.6% NZ_CP036170.1: Lanthipeptides: HDCHBGLK_RS18795_lanthipeptide

4

SSFLTIVCC

12

+FLTI CC

11

GTFLTIYCC

19

29.2% NZ_CP048626.1: Lanthipeptides: GXM18_RS04600_lanthipeptide

2

DTSSFLTIVCC

12

D +SF TI CC

14

DNASFFTIFCC

24

26.9% NZ_CP070036.1and 3 others:

NZ_JADMPO010000043.1 Lanthipeptides: I2I27_RS16805_lanthipeptideNZ_JADNGF010000061.1 Lanthipeptides: I2E06_RS15650_lanthipeptideNZ_JAQMLK010000037.1 Lanthipeptides: PNW18_RS16660_lanthipeptide

Lanthipeptides: I6K72_RS03970_lanthipeptide

4

SSFLTIVCC

12

S+FLTI CC

18

SAFLTIYCC

26

20.6% NZ_JADPCB010000035.1: Lanthipeptides: I4W51_RS14990_lanthipeptide

3

TSSFLTIVCC

12

T +FLTI+CC

25

TGAFLTILCC

34

17.9% NZ_CP094681.1: Lanthipeptides: K5I26_RS05295_lanthipeptide

1

TDTSSFLTIVCC

12

+D + FLTI CC

28

SDCALFLTIFCC

39

17.9% NZ_JAOQJV010000004.1: Lanthipeptides: OCV65_RS05205_lanthipeptide

4

SSFLTIVCC

12

S FLTI+CC

31

SGFLTIICC

39

17.6% NZ_MCGI01000004.1and 1 other:

NZ_MPDJ01000004.1 Lanthipeptides: BLA28_RS33805_lanthipeptide

Lanthipeptides: BEH84_RS33640_lanthipeptide

1

TDTSSFLTIVCC

12

T+++ FL+I CC

23

TESTPFLSIFCC

34

15.8% NZ_LT969517.1and 1 other:

NZ_QVLV01000012.1 Lanthipeptides: DXC51_RS29565_lanthipeptide

Lanthipeptides: C1733_RS32195_lanthipeptide

1

TDTSSFLTIVCC

12

T ++ FL+I CC

27

TASTGFLSIFCC

38

15.4% NZ_JADNBM010000025.1and 2 others:

NZ_JAQDZW010000013.1 Lanthipeptides: PGT55_RS13345_lanthipeptideNZ_QVMC01000003.1 Lanthipeptides: DWV46_RS15805_lanthipeptide

Lanthipeptides: I2A62_RS14145_lanthipeptide

4

SSFLTIVCC

12

++FLTI CC

31

TAFLTIFCC

39

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lanthipeptides

Core peptide predictions

ctg119_5 - Class II

Cleavage pHMM score: -4.00

RODEO score: 0

Monoisotopic mass: 1198.6 Da

Molecular weight: 1199.4 Da

Number of bridges: 2

Alternative weights: (assuming N unmodified Ser/Thr residues); 1217.4 Da N = 1; 1235.4 Da N = 2; 1253.4 Da N = 3

gnlProkkaEOGDNDGO_119 - Region 2 - cyclic-lactone-autoinducer

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Location: 17,120 - 28,139 nt. (total: 11,020 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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gnlProkkaEOGDNDGO_142 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 11,161 nt. (total: 11,161 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

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gnlProkkaEOGDNDGO_146 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 14,331 nt. (total: 14,331 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

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resistance

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KnownClusterBlast

Gene/CDS overview

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gnlProkkaEOGDNDGO_147 - Region 1 - RRE-containing

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Location: 2,424 - 13,784 nt. (total: 11,361 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

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gnlProkkaEOGDNDGO_154 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 11,296 nt. (total: 11,296 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

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other genes

resistance

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Gene details

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Gene overview

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Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
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