GCA_009889825.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNOIDCGFC_11 (original name was: gnl|Prokka|NOIDCGFC_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	148,177	189,346

gnlProkkaNOIDCGFC_27 (original name was: gnl|Prokka|NOIDCGFC_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	terpene	136,746	157,627

gnlProkkaNOIDCGFC_29 (original name was: gnl|Prokka|NOIDCGFC_29)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	cyclic-lactone-autoinducer	191,798	212,503

gnlProkkaNOIDCGFC_34 (original name was: gnl|Prokka|NOIDCGFC_34)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	RiPP-like	64,515	76,665

Region	Type	From	To	Similarity
Region 11.1	T3PKS	148,177	189,346
Region 24.1	terpene	136,746	157,627
Region 26.1	cyclic-lactone-autoinducer	191,798	212,503
Region 31.1	RiPP-like	64,515	76,665

No secondary metabolite regions were found in these records:: gnlProkkaNOIDCGFC_1 (original name was: gnl|Prokka|NOIDCGFC_1); gnlProkkaNOIDCGFC_2 (original name was: gnl|Prokka|NOIDCGFC_2); gnlProkkaNOIDCGFC_3 (original name was: gnl|Prokka|NOIDCGFC_3); gnlProkkaNOIDCGFC_4 (original name was: gnl|Prokka|NOIDCGFC_4); gnlProkkaNOIDCGFC_5 (original name was: gnl|Prokka|NOIDCGFC_5); gnlProkkaNOIDCGFC_6 (original name was: gnl|Prokka|NOIDCGFC_6); gnlProkkaNOIDCGFC_7 (original name was: gnl|Prokka|NOIDCGFC_7); gnlProkkaNOIDCGFC_8 (original name was: gnl|Prokka|NOIDCGFC_8); gnlProkkaNOIDCGFC_9 (original name was: gnl|Prokka|NOIDCGFC_9); gnlProkkaNOIDCGFC_10 (original name was: gnl|Prokka|NOIDCGFC_10); gnlProkkaNOIDCGFC_13 (original name was: gnl|Prokka|NOIDCGFC_13); gnlProkkaNOIDCGFC_14 (original name was: gnl|Prokka|NOIDCGFC_14); gnlProkkaNOIDCGFC_15 (original name was: gnl|Prokka|NOIDCGFC_15); gnlProkkaNOIDCGFC_16 (original name was: gnl|Prokka|NOIDCGFC_16); gnlProkkaNOIDCGFC_18 (original name was: gnl|Prokka|NOIDCGFC_18); gnlProkkaNOIDCGFC_19 (original name was: gnl|Prokka|NOIDCGFC_19); gnlProkkaNOIDCGFC_20 (original name was: gnl|Prokka|NOIDCGFC_20); gnlProkkaNOIDCGFC_21 (original name was: gnl|Prokka|NOIDCGFC_21); gnlProkkaNOIDCGFC_22 (original name was: gnl|Prokka|NOIDCGFC_22); gnlProkkaNOIDCGFC_23 (original name was: gnl|Prokka|NOIDCGFC_23); gnlProkkaNOIDCGFC_25 (original name was: gnl|Prokka|NOIDCGFC_25); gnlProkkaNOIDCGFC_26 (original name was: gnl|Prokka|NOIDCGFC_26); gnlProkkaNOIDCGFC_28 (original name was: gnl|Prokka|NOIDCGFC_28); gnlProkkaNOIDCGFC_30 (original name was: gnl|Prokka|NOIDCGFC_30); gnlProkkaNOIDCGFC_31 (original name was: gnl|Prokka|NOIDCGFC_31); gnlProkkaNOIDCGFC_32 (original name was: gnl|Prokka|NOIDCGFC_32); gnlProkkaNOIDCGFC_33 (original name was: gnl|Prokka|NOIDCGFC_33); gnlProkkaNOIDCGFC_35 (original name was: gnl|Prokka|NOIDCGFC_35); gnlProkkaNOIDCGFC_36 (original name was: gnl|Prokka|NOIDCGFC_36); gnlProkkaNOIDCGFC_37 (original name was: gnl|Prokka|NOIDCGFC_37); gnlProkkaNOIDCGFC_38 (original name was: gnl|Prokka|NOIDCGFC_38); gnlProkkaNOIDCGFC_39 (original name was: gnl|Prokka|NOIDCGFC_39); gnlProkkaNOIDCGFC_40 (original name was: gnl|Prokka|NOIDCGFC_40); gnlProkkaNOIDCGFC_41 (original name was: gnl|Prokka|NOIDCGFC_41); gnlProkkaNOIDCGFC_45 (original name was: gnl|Prokka|NOIDCGFC_45); gnlProkkaNOIDCGFC_47 (original name was: gnl|Prokka|NOIDCGFC_47)

Compact view

gnlProkkaNOIDCGFC_11 - Region 1 - T3PKS

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Location: 148,177 - 189,346 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

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resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNOIDCGFC_27 - Region 1 - terpene

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Location: 136,746 - 157,627 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNOIDCGFC_29 - Region 1 - cyclic-lactone-autoinducer

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Location: 191,798 - 212,503 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNOIDCGFC_34 - Region 1 - RiPP-like

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Location: 64,515 - 76,665 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.