GCA_009889835.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLEECCEBA_10 (original name was: gnl|Prokka|LEECCEBA_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	T3PKS	147,790	188,959

gnlProkkaLEECCEBA_25 (original name was: gnl|Prokka|LEECCEBA_25)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	terpene	136,746	157,627

gnlProkkaLEECCEBA_27 (original name was: gnl|Prokka|LEECCEBA_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	cyclic-lactone-autoinducer	191,798	212,503

gnlProkkaLEECCEBA_43 (original name was: gnl|Prokka|LEECCEBA_43)

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	RiPP-like	64,376	76,526

Region	Type	From	To	Similarity
Region 10.1	T3PKS	147,790	188,959
Region 22.1	terpene	136,746	157,627
Region 24.1	cyclic-lactone-autoinducer	191,798	212,503
Region 39.1	RiPP-like	64,376	76,526

No secondary metabolite regions were found in these records:: gnlProkkaLEECCEBA_1 (original name was: gnl|Prokka|LEECCEBA_1); gnlProkkaLEECCEBA_2 (original name was: gnl|Prokka|LEECCEBA_2); gnlProkkaLEECCEBA_3 (original name was: gnl|Prokka|LEECCEBA_3); gnlProkkaLEECCEBA_4 (original name was: gnl|Prokka|LEECCEBA_4); gnlProkkaLEECCEBA_5 (original name was: gnl|Prokka|LEECCEBA_5); gnlProkkaLEECCEBA_6 (original name was: gnl|Prokka|LEECCEBA_6); gnlProkkaLEECCEBA_7 (original name was: gnl|Prokka|LEECCEBA_7); gnlProkkaLEECCEBA_8 (original name was: gnl|Prokka|LEECCEBA_8); gnlProkkaLEECCEBA_9 (original name was: gnl|Prokka|LEECCEBA_9); gnlProkkaLEECCEBA_11 (original name was: gnl|Prokka|LEECCEBA_11); gnlProkkaLEECCEBA_13 (original name was: gnl|Prokka|LEECCEBA_13); gnlProkkaLEECCEBA_14 (original name was: gnl|Prokka|LEECCEBA_14); gnlProkkaLEECCEBA_15 (original name was: gnl|Prokka|LEECCEBA_15); gnlProkkaLEECCEBA_16 (original name was: gnl|Prokka|LEECCEBA_16); gnlProkkaLEECCEBA_17 (original name was: gnl|Prokka|LEECCEBA_17); gnlProkkaLEECCEBA_18 (original name was: gnl|Prokka|LEECCEBA_18); gnlProkkaLEECCEBA_19 (original name was: gnl|Prokka|LEECCEBA_19); gnlProkkaLEECCEBA_20 (original name was: gnl|Prokka|LEECCEBA_20); gnlProkkaLEECCEBA_22 (original name was: gnl|Prokka|LEECCEBA_22); gnlProkkaLEECCEBA_24 (original name was: gnl|Prokka|LEECCEBA_24); gnlProkkaLEECCEBA_26 (original name was: gnl|Prokka|LEECCEBA_26); gnlProkkaLEECCEBA_28 (original name was: gnl|Prokka|LEECCEBA_28); gnlProkkaLEECCEBA_29 (original name was: gnl|Prokka|LEECCEBA_29); gnlProkkaLEECCEBA_30 (original name was: gnl|Prokka|LEECCEBA_30); gnlProkkaLEECCEBA_31 (original name was: gnl|Prokka|LEECCEBA_31); gnlProkkaLEECCEBA_32 (original name was: gnl|Prokka|LEECCEBA_32); gnlProkkaLEECCEBA_33 (original name was: gnl|Prokka|LEECCEBA_33); gnlProkkaLEECCEBA_34 (original name was: gnl|Prokka|LEECCEBA_34); gnlProkkaLEECCEBA_35 (original name was: gnl|Prokka|LEECCEBA_35); gnlProkkaLEECCEBA_36 (original name was: gnl|Prokka|LEECCEBA_36); gnlProkkaLEECCEBA_37 (original name was: gnl|Prokka|LEECCEBA_37); gnlProkkaLEECCEBA_38 (original name was: gnl|Prokka|LEECCEBA_38); gnlProkkaLEECCEBA_39 (original name was: gnl|Prokka|LEECCEBA_39); gnlProkkaLEECCEBA_40 (original name was: gnl|Prokka|LEECCEBA_40); gnlProkkaLEECCEBA_41 (original name was: gnl|Prokka|LEECCEBA_41); gnlProkkaLEECCEBA_44 (original name was: gnl|Prokka|LEECCEBA_44); gnlProkkaLEECCEBA_45 (original name was: gnl|Prokka|LEECCEBA_45); gnlProkkaLEECCEBA_46 (original name was: gnl|Prokka|LEECCEBA_46); gnlProkkaLEECCEBA_47 (original name was: gnl|Prokka|LEECCEBA_47)

Compact view

gnlProkkaLEECCEBA_10 - Region 1 - T3PKS

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Location: 147,790 - 188,959 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLEECCEBA_25 - Region 1 - terpene

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Location: 136,746 - 157,627 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLEECCEBA_27 - Region 1 - cyclic-lactone-autoinducer

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Location: 191,798 - 212,503 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLEECCEBA_43 - Region 1 - RiPP-like

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Location: 64,376 - 76,526 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.