GCA_009889895.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKMGJLPKM_9 (original name was: gnl|Prokka|KMGJLPKM_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	T3PKS	147,790	188,959

gnlProkkaKMGJLPKM_24 (original name was: gnl|Prokka|KMGJLPKM_24)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	terpene	136,746	157,627

gnlProkkaKMGJLPKM_26 (original name was: gnl|Prokka|KMGJLPKM_26)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	cyclic-lactone-autoinducer	191,798	212,503

gnlProkkaKMGJLPKM_41 (original name was: gnl|Prokka|KMGJLPKM_41)

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	RiPP-like	64,376	76,526

Region	Type	From	To	Similarity
Region 9.1	T3PKS	147,790	188,959
Region 22.1	terpene	136,746	157,627
Region 24.1	cyclic-lactone-autoinducer	191,798	212,503
Region 38.1	RiPP-like	64,376	76,526

No secondary metabolite regions were found in these records:: gnlProkkaKMGJLPKM_1 (original name was: gnl|Prokka|KMGJLPKM_1); gnlProkkaKMGJLPKM_2 (original name was: gnl|Prokka|KMGJLPKM_2); gnlProkkaKMGJLPKM_3 (original name was: gnl|Prokka|KMGJLPKM_3); gnlProkkaKMGJLPKM_4 (original name was: gnl|Prokka|KMGJLPKM_4); gnlProkkaKMGJLPKM_5 (original name was: gnl|Prokka|KMGJLPKM_5); gnlProkkaKMGJLPKM_6 (original name was: gnl|Prokka|KMGJLPKM_6); gnlProkkaKMGJLPKM_7 (original name was: gnl|Prokka|KMGJLPKM_7); gnlProkkaKMGJLPKM_8 (original name was: gnl|Prokka|KMGJLPKM_8); gnlProkkaKMGJLPKM_10 (original name was: gnl|Prokka|KMGJLPKM_10); gnlProkkaKMGJLPKM_11 (original name was: gnl|Prokka|KMGJLPKM_11); gnlProkkaKMGJLPKM_13 (original name was: gnl|Prokka|KMGJLPKM_13); gnlProkkaKMGJLPKM_14 (original name was: gnl|Prokka|KMGJLPKM_14); gnlProkkaKMGJLPKM_15 (original name was: gnl|Prokka|KMGJLPKM_15); gnlProkkaKMGJLPKM_16 (original name was: gnl|Prokka|KMGJLPKM_16); gnlProkkaKMGJLPKM_17 (original name was: gnl|Prokka|KMGJLPKM_17); gnlProkkaKMGJLPKM_18 (original name was: gnl|Prokka|KMGJLPKM_18); gnlProkkaKMGJLPKM_19 (original name was: gnl|Prokka|KMGJLPKM_19); gnlProkkaKMGJLPKM_20 (original name was: gnl|Prokka|KMGJLPKM_20); gnlProkkaKMGJLPKM_21 (original name was: gnl|Prokka|KMGJLPKM_21); gnlProkkaKMGJLPKM_22 (original name was: gnl|Prokka|KMGJLPKM_22); gnlProkkaKMGJLPKM_25 (original name was: gnl|Prokka|KMGJLPKM_25); gnlProkkaKMGJLPKM_27 (original name was: gnl|Prokka|KMGJLPKM_27); gnlProkkaKMGJLPKM_28 (original name was: gnl|Prokka|KMGJLPKM_28); gnlProkkaKMGJLPKM_29 (original name was: gnl|Prokka|KMGJLPKM_29); gnlProkkaKMGJLPKM_30 (original name was: gnl|Prokka|KMGJLPKM_30); gnlProkkaKMGJLPKM_31 (original name was: gnl|Prokka|KMGJLPKM_31); gnlProkkaKMGJLPKM_32 (original name was: gnl|Prokka|KMGJLPKM_32); gnlProkkaKMGJLPKM_33 (original name was: gnl|Prokka|KMGJLPKM_33); gnlProkkaKMGJLPKM_34 (original name was: gnl|Prokka|KMGJLPKM_34); gnlProkkaKMGJLPKM_35 (original name was: gnl|Prokka|KMGJLPKM_35); gnlProkkaKMGJLPKM_36 (original name was: gnl|Prokka|KMGJLPKM_36); gnlProkkaKMGJLPKM_37 (original name was: gnl|Prokka|KMGJLPKM_37); gnlProkkaKMGJLPKM_38 (original name was: gnl|Prokka|KMGJLPKM_38); gnlProkkaKMGJLPKM_39 (original name was: gnl|Prokka|KMGJLPKM_39); gnlProkkaKMGJLPKM_42 (original name was: gnl|Prokka|KMGJLPKM_42); gnlProkkaKMGJLPKM_43 (original name was: gnl|Prokka|KMGJLPKM_43); gnlProkkaKMGJLPKM_44 (original name was: gnl|Prokka|KMGJLPKM_44); gnlProkkaKMGJLPKM_45 (original name was: gnl|Prokka|KMGJLPKM_45)

Compact view

gnlProkkaKMGJLPKM_9 - Region 1 - T3PKS

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Location: 147,790 - 188,959 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKMGJLPKM_24 - Region 1 - terpene

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Location: 136,746 - 157,627 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKMGJLPKM_26 - Region 1 - cyclic-lactone-autoinducer

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Location: 191,798 - 212,503 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKMGJLPKM_41 - Region 1 - RiPP-like

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Location: 64,376 - 76,526 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.