GCA_009889935.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMGGAKNBC_7 (original name was: gnl|Prokka|MGGAKNBC_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	T3PKS	147,790	188,959

gnlProkkaMGGAKNBC_12 (original name was: gnl|Prokka|MGGAKNBC_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	64,376	76,526

gnlProkkaMGGAKNBC_20 (original name was: gnl|Prokka|MGGAKNBC_20)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	terpene	136,746	157,627

gnlProkkaMGGAKNBC_22 (original name was: gnl|Prokka|MGGAKNBC_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	cyclic-lactone-autoinducer	191,798	212,503

Region	Type	From	To	Similarity
Region 7.1	T3PKS	147,790	188,959
Region 12.1	RiPP-like	64,376	76,526
Region 19.1	terpene	136,746	157,627
Region 21.1	cyclic-lactone-autoinducer	191,798	212,503

No secondary metabolite regions were found in these records:: gnlProkkaMGGAKNBC_1 (original name was: gnl|Prokka|MGGAKNBC_1); gnlProkkaMGGAKNBC_2 (original name was: gnl|Prokka|MGGAKNBC_2); gnlProkkaMGGAKNBC_3 (original name was: gnl|Prokka|MGGAKNBC_3); gnlProkkaMGGAKNBC_4 (original name was: gnl|Prokka|MGGAKNBC_4); gnlProkkaMGGAKNBC_5 (original name was: gnl|Prokka|MGGAKNBC_5); gnlProkkaMGGAKNBC_6 (original name was: gnl|Prokka|MGGAKNBC_6); gnlProkkaMGGAKNBC_8 (original name was: gnl|Prokka|MGGAKNBC_8); gnlProkkaMGGAKNBC_9 (original name was: gnl|Prokka|MGGAKNBC_9); gnlProkkaMGGAKNBC_10 (original name was: gnl|Prokka|MGGAKNBC_10); gnlProkkaMGGAKNBC_11 (original name was: gnl|Prokka|MGGAKNBC_11); gnlProkkaMGGAKNBC_13 (original name was: gnl|Prokka|MGGAKNBC_13); gnlProkkaMGGAKNBC_14 (original name was: gnl|Prokka|MGGAKNBC_14); gnlProkkaMGGAKNBC_15 (original name was: gnl|Prokka|MGGAKNBC_15); gnlProkkaMGGAKNBC_16 (original name was: gnl|Prokka|MGGAKNBC_16); gnlProkkaMGGAKNBC_18 (original name was: gnl|Prokka|MGGAKNBC_18); gnlProkkaMGGAKNBC_19 (original name was: gnl|Prokka|MGGAKNBC_19); gnlProkkaMGGAKNBC_21 (original name was: gnl|Prokka|MGGAKNBC_21); gnlProkkaMGGAKNBC_23 (original name was: gnl|Prokka|MGGAKNBC_23); gnlProkkaMGGAKNBC_24 (original name was: gnl|Prokka|MGGAKNBC_24); gnlProkkaMGGAKNBC_25 (original name was: gnl|Prokka|MGGAKNBC_25); gnlProkkaMGGAKNBC_26 (original name was: gnl|Prokka|MGGAKNBC_26); gnlProkkaMGGAKNBC_27 (original name was: gnl|Prokka|MGGAKNBC_27); gnlProkkaMGGAKNBC_28 (original name was: gnl|Prokka|MGGAKNBC_28); gnlProkkaMGGAKNBC_29 (original name was: gnl|Prokka|MGGAKNBC_29); gnlProkkaMGGAKNBC_30 (original name was: gnl|Prokka|MGGAKNBC_30); gnlProkkaMGGAKNBC_31 (original name was: gnl|Prokka|MGGAKNBC_31); gnlProkkaMGGAKNBC_32 (original name was: gnl|Prokka|MGGAKNBC_32); gnlProkkaMGGAKNBC_33 (original name was: gnl|Prokka|MGGAKNBC_33); gnlProkkaMGGAKNBC_34 (original name was: gnl|Prokka|MGGAKNBC_34); gnlProkkaMGGAKNBC_35 (original name was: gnl|Prokka|MGGAKNBC_35); gnlProkkaMGGAKNBC_36 (original name was: gnl|Prokka|MGGAKNBC_36); gnlProkkaMGGAKNBC_37 (original name was: gnl|Prokka|MGGAKNBC_37); gnlProkkaMGGAKNBC_40 (original name was: gnl|Prokka|MGGAKNBC_40); gnlProkkaMGGAKNBC_41 (original name was: gnl|Prokka|MGGAKNBC_41); gnlProkkaMGGAKNBC_42 (original name was: gnl|Prokka|MGGAKNBC_42); gnlProkkaMGGAKNBC_43 (original name was: gnl|Prokka|MGGAKNBC_43); gnlProkkaMGGAKNBC_44 (original name was: gnl|Prokka|MGGAKNBC_44)

Compact view

gnlProkkaMGGAKNBC_7 - Region 1 - T3PKS

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Location: 147,790 - 188,959 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMGGAKNBC_12 - Region 1 - RiPP-like

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Location: 64,376 - 76,526 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMGGAKNBC_20 - Region 1 - terpene

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Location: 136,746 - 157,627 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMGGAKNBC_22 - Region 1 - cyclic-lactone-autoinducer

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Location: 191,798 - 212,503 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.