GCA_009890055.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPMDBBNKE_9 (original name was: gnl|Prokka|PMDBBNKE_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	T3PKS	147,790	188,959

gnlProkkaPMDBBNKE_25 (original name was: gnl|Prokka|PMDBBNKE_25)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	terpene	94,941	115,822

gnlProkkaPMDBBNKE_27 (original name was: gnl|Prokka|PMDBBNKE_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	cyclic-lactone-autoinducer	191,798	212,503

gnlProkkaPMDBBNKE_42 (original name was: gnl|Prokka|PMDBBNKE_42)

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	RiPP-like	64,376	76,526

Region	Type	From	To	Similarity
Region 9.1	T3PKS	147,790	188,959
Region 22.1	terpene	94,941	115,822
Region 24.1	cyclic-lactone-autoinducer	191,798	212,503
Region 38.1	RiPP-like	64,376	76,526

No secondary metabolite regions were found in these records:: gnlProkkaPMDBBNKE_1 (original name was: gnl|Prokka|PMDBBNKE_1); gnlProkkaPMDBBNKE_2 (original name was: gnl|Prokka|PMDBBNKE_2); gnlProkkaPMDBBNKE_3 (original name was: gnl|Prokka|PMDBBNKE_3); gnlProkkaPMDBBNKE_4 (original name was: gnl|Prokka|PMDBBNKE_4); gnlProkkaPMDBBNKE_5 (original name was: gnl|Prokka|PMDBBNKE_5); gnlProkkaPMDBBNKE_6 (original name was: gnl|Prokka|PMDBBNKE_6); gnlProkkaPMDBBNKE_7 (original name was: gnl|Prokka|PMDBBNKE_7); gnlProkkaPMDBBNKE_8 (original name was: gnl|Prokka|PMDBBNKE_8); gnlProkkaPMDBBNKE_10 (original name was: gnl|Prokka|PMDBBNKE_10); gnlProkkaPMDBBNKE_11 (original name was: gnl|Prokka|PMDBBNKE_11); gnlProkkaPMDBBNKE_13 (original name was: gnl|Prokka|PMDBBNKE_13); gnlProkkaPMDBBNKE_14 (original name was: gnl|Prokka|PMDBBNKE_14); gnlProkkaPMDBBNKE_15 (original name was: gnl|Prokka|PMDBBNKE_15); gnlProkkaPMDBBNKE_16 (original name was: gnl|Prokka|PMDBBNKE_16); gnlProkkaPMDBBNKE_17 (original name was: gnl|Prokka|PMDBBNKE_17); gnlProkkaPMDBBNKE_18 (original name was: gnl|Prokka|PMDBBNKE_18); gnlProkkaPMDBBNKE_20 (original name was: gnl|Prokka|PMDBBNKE_20); gnlProkkaPMDBBNKE_21 (original name was: gnl|Prokka|PMDBBNKE_21); gnlProkkaPMDBBNKE_22 (original name was: gnl|Prokka|PMDBBNKE_22); gnlProkkaPMDBBNKE_24 (original name was: gnl|Prokka|PMDBBNKE_24); gnlProkkaPMDBBNKE_26 (original name was: gnl|Prokka|PMDBBNKE_26); gnlProkkaPMDBBNKE_28 (original name was: gnl|Prokka|PMDBBNKE_28); gnlProkkaPMDBBNKE_29 (original name was: gnl|Prokka|PMDBBNKE_29); gnlProkkaPMDBBNKE_30 (original name was: gnl|Prokka|PMDBBNKE_30); gnlProkkaPMDBBNKE_31 (original name was: gnl|Prokka|PMDBBNKE_31); gnlProkkaPMDBBNKE_32 (original name was: gnl|Prokka|PMDBBNKE_32); gnlProkkaPMDBBNKE_33 (original name was: gnl|Prokka|PMDBBNKE_33); gnlProkkaPMDBBNKE_34 (original name was: gnl|Prokka|PMDBBNKE_34); gnlProkkaPMDBBNKE_35 (original name was: gnl|Prokka|PMDBBNKE_35); gnlProkkaPMDBBNKE_36 (original name was: gnl|Prokka|PMDBBNKE_36); gnlProkkaPMDBBNKE_37 (original name was: gnl|Prokka|PMDBBNKE_37); gnlProkkaPMDBBNKE_38 (original name was: gnl|Prokka|PMDBBNKE_38); gnlProkkaPMDBBNKE_39 (original name was: gnl|Prokka|PMDBBNKE_39); gnlProkkaPMDBBNKE_40 (original name was: gnl|Prokka|PMDBBNKE_40); gnlProkkaPMDBBNKE_43 (original name was: gnl|Prokka|PMDBBNKE_43); gnlProkkaPMDBBNKE_44 (original name was: gnl|Prokka|PMDBBNKE_44); gnlProkkaPMDBBNKE_45 (original name was: gnl|Prokka|PMDBBNKE_45); gnlProkkaPMDBBNKE_46 (original name was: gnl|Prokka|PMDBBNKE_46)

Compact view

gnlProkkaPMDBBNKE_9 - Region 1 - T3PKS

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Location: 147,790 - 188,959 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPMDBBNKE_25 - Region 1 - terpene

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Location: 94,941 - 115,822 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPMDBBNKE_27 - Region 1 - cyclic-lactone-autoinducer

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Location: 191,798 - 212,503 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPMDBBNKE_42 - Region 1 - RiPP-like

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Location: 64,376 - 76,526 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.