GCA_011009755.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMOHMDLIP_1 (original name was: gnl|Prokka|MOHMDLIP_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	1	26,021

gnlProkkaMOHMDLIP_4 (original name was: gnl|Prokka|MOHMDLIP_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	cyclic-lactone-autoinducer	196,077	216,782

gnlProkkaMOHMDLIP_5 (original name was: gnl|Prokka|MOHMDLIP_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RiPP-like	106,881	119,031

gnlProkkaMOHMDLIP_10 (original name was: gnl|Prokka|MOHMDLIP_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	terpene	31,787	52,668

Region	Type	From	To	Similarity
Region 1.1	T3PKS	1	26,021
Region 4.1	cyclic-lactone-autoinducer	196,077	216,782
Region 5.1	RiPP-like	106,881	119,031
Region 10.1	terpene	31,787	52,668

No secondary metabolite regions were found in these records:: gnlProkkaMOHMDLIP_2 (original name was: gnl|Prokka|MOHMDLIP_2); gnlProkkaMOHMDLIP_3 (original name was: gnl|Prokka|MOHMDLIP_3); gnlProkkaMOHMDLIP_6 (original name was: gnl|Prokka|MOHMDLIP_6); gnlProkkaMOHMDLIP_7 (original name was: gnl|Prokka|MOHMDLIP_7); gnlProkkaMOHMDLIP_8 (original name was: gnl|Prokka|MOHMDLIP_8); gnlProkkaMOHMDLIP_9 (original name was: gnl|Prokka|MOHMDLIP_9); gnlProkkaMOHMDLIP_11 (original name was: gnl|Prokka|MOHMDLIP_11); gnlProkkaMOHMDLIP_12 (original name was: gnl|Prokka|MOHMDLIP_12); gnlProkkaMOHMDLIP_13 (original name was: gnl|Prokka|MOHMDLIP_13); gnlProkkaMOHMDLIP_14 (original name was: gnl|Prokka|MOHMDLIP_14); gnlProkkaMOHMDLIP_15 (original name was: gnl|Prokka|MOHMDLIP_15); gnlProkkaMOHMDLIP_16 (original name was: gnl|Prokka|MOHMDLIP_16); gnlProkkaMOHMDLIP_17 (original name was: gnl|Prokka|MOHMDLIP_17); gnlProkkaMOHMDLIP_18 (original name was: gnl|Prokka|MOHMDLIP_18); gnlProkkaMOHMDLIP_19 (original name was: gnl|Prokka|MOHMDLIP_19); gnlProkkaMOHMDLIP_20 (original name was: gnl|Prokka|MOHMDLIP_20); gnlProkkaMOHMDLIP_21 (original name was: gnl|Prokka|MOHMDLIP_21); gnlProkkaMOHMDLIP_22 (original name was: gnl|Prokka|MOHMDLIP_22); gnlProkkaMOHMDLIP_23 (original name was: gnl|Prokka|MOHMDLIP_23); gnlProkkaMOHMDLIP_24 (original name was: gnl|Prokka|MOHMDLIP_24); gnlProkkaMOHMDLIP_25 (original name was: gnl|Prokka|MOHMDLIP_25); gnlProkkaMOHMDLIP_26 (original name was: gnl|Prokka|MOHMDLIP_26); gnlProkkaMOHMDLIP_27 (original name was: gnl|Prokka|MOHMDLIP_27); gnlProkkaMOHMDLIP_28 (original name was: gnl|Prokka|MOHMDLIP_28); gnlProkkaMOHMDLIP_29 (original name was: gnl|Prokka|MOHMDLIP_29); gnlProkkaMOHMDLIP_30 (original name was: gnl|Prokka|MOHMDLIP_30); gnlProkkaMOHMDLIP_31 (original name was: gnl|Prokka|MOHMDLIP_31); gnlProkkaMOHMDLIP_32 (original name was: gnl|Prokka|MOHMDLIP_32); gnlProkkaMOHMDLIP_33 (original name was: gnl|Prokka|MOHMDLIP_33); gnlProkkaMOHMDLIP_34 (original name was: gnl|Prokka|MOHMDLIP_34); gnlProkkaMOHMDLIP_35 (original name was: gnl|Prokka|MOHMDLIP_35)

Compact view

gnlProkkaMOHMDLIP_1 - Region 1 - T3PKS

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Location: 1 - 26,021 nt. (total: 26,021 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMOHMDLIP_4 - Region 1 - cyclic-lactone-autoinducer

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Location: 196,077 - 216,782 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMOHMDLIP_5 - Region 1 - RiPP-like

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Location: 106,881 - 119,031 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMOHMDLIP_10 - Region 1 - terpene

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Location: 31,787 - 52,668 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.