GCA_012932835.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBNHMAMPJ_12 (original name was: gnl|Prokka|BNHMAMPJ_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	44,053	52,661

gnlProkkaBNHMAMPJ_13 (original name was: gnl|Prokka|BNHMAMPJ_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	RiPP-like	195,841	203,901

gnlProkkaBNHMAMPJ_35 (original name was: gnl|Prokka|BNHMAMPJ_35)

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	RiPP-like	45,327	68,443

Region	Type	From	To	Similarity
Region 12.1	RiPP-like	44,053	52,661
Region 13.1	RiPP-like	195,841	203,901
Region 35.1	RiPP-like	45,327	68,443

No secondary metabolite regions were found in these records:: gnlProkkaBNHMAMPJ_1 (original name was: gnl|Prokka|BNHMAMPJ_1); gnlProkkaBNHMAMPJ_2 (original name was: gnl|Prokka|BNHMAMPJ_2); gnlProkkaBNHMAMPJ_3 (original name was: gnl|Prokka|BNHMAMPJ_3); gnlProkkaBNHMAMPJ_4 (original name was: gnl|Prokka|BNHMAMPJ_4); gnlProkkaBNHMAMPJ_5 (original name was: gnl|Prokka|BNHMAMPJ_5); gnlProkkaBNHMAMPJ_6 (original name was: gnl|Prokka|BNHMAMPJ_6); gnlProkkaBNHMAMPJ_7 (original name was: gnl|Prokka|BNHMAMPJ_7); gnlProkkaBNHMAMPJ_8 (original name was: gnl|Prokka|BNHMAMPJ_8); gnlProkkaBNHMAMPJ_9 (original name was: gnl|Prokka|BNHMAMPJ_9); gnlProkkaBNHMAMPJ_10 (original name was: gnl|Prokka|BNHMAMPJ_10); gnlProkkaBNHMAMPJ_11 (original name was: gnl|Prokka|BNHMAMPJ_11); gnlProkkaBNHMAMPJ_14 (original name was: gnl|Prokka|BNHMAMPJ_14); gnlProkkaBNHMAMPJ_15 (original name was: gnl|Prokka|BNHMAMPJ_15); gnlProkkaBNHMAMPJ_16 (original name was: gnl|Prokka|BNHMAMPJ_16); gnlProkkaBNHMAMPJ_17 (original name was: gnl|Prokka|BNHMAMPJ_17); gnlProkkaBNHMAMPJ_18 (original name was: gnl|Prokka|BNHMAMPJ_18); gnlProkkaBNHMAMPJ_19 (original name was: gnl|Prokka|BNHMAMPJ_19); gnlProkkaBNHMAMPJ_20 (original name was: gnl|Prokka|BNHMAMPJ_20); gnlProkkaBNHMAMPJ_21 (original name was: gnl|Prokka|BNHMAMPJ_21); gnlProkkaBNHMAMPJ_22 (original name was: gnl|Prokka|BNHMAMPJ_22); gnlProkkaBNHMAMPJ_23 (original name was: gnl|Prokka|BNHMAMPJ_23); gnlProkkaBNHMAMPJ_24 (original name was: gnl|Prokka|BNHMAMPJ_24); gnlProkkaBNHMAMPJ_25 (original name was: gnl|Prokka|BNHMAMPJ_25); gnlProkkaBNHMAMPJ_26 (original name was: gnl|Prokka|BNHMAMPJ_26); gnlProkkaBNHMAMPJ_27 (original name was: gnl|Prokka|BNHMAMPJ_27); gnlProkkaBNHMAMPJ_28 (original name was: gnl|Prokka|BNHMAMPJ_28); gnlProkkaBNHMAMPJ_29 (original name was: gnl|Prokka|BNHMAMPJ_29); gnlProkkaBNHMAMPJ_30 (original name was: gnl|Prokka|BNHMAMPJ_30); gnlProkkaBNHMAMPJ_31 (original name was: gnl|Prokka|BNHMAMPJ_31); gnlProkkaBNHMAMPJ_32 (original name was: gnl|Prokka|BNHMAMPJ_32); gnlProkkaBNHMAMPJ_33 (original name was: gnl|Prokka|BNHMAMPJ_33); gnlProkkaBNHMAMPJ_34 (original name was: gnl|Prokka|BNHMAMPJ_34); gnlProkkaBNHMAMPJ_36 (original name was: gnl|Prokka|BNHMAMPJ_36); gnlProkkaBNHMAMPJ_37 (original name was: gnl|Prokka|BNHMAMPJ_37); gnlProkkaBNHMAMPJ_38 (original name was: gnl|Prokka|BNHMAMPJ_38); gnlProkkaBNHMAMPJ_39 (original name was: gnl|Prokka|BNHMAMPJ_39); gnlProkkaBNHMAMPJ_40 (original name was: gnl|Prokka|BNHMAMPJ_40); gnlProkkaBNHMAMPJ_41 (original name was: gnl|Prokka|BNHMAMPJ_41); gnlProkkaBNHMAMPJ_42 (original name was: gnl|Prokka|BNHMAMPJ_42); gnlProkkaBNHMAMPJ_43 (original name was: gnl|Prokka|BNHMAMPJ_43); gnlProkkaBNHMAMPJ_44 (original name was: gnl|Prokka|BNHMAMPJ_44); gnlProkkaBNHMAMPJ_45 (original name was: gnl|Prokka|BNHMAMPJ_45); gnlProkkaBNHMAMPJ_46 (original name was: gnl|Prokka|BNHMAMPJ_46); gnlProkkaBNHMAMPJ_47 (original name was: gnl|Prokka|BNHMAMPJ_47); gnlProkkaBNHMAMPJ_48 (original name was: gnl|Prokka|BNHMAMPJ_48); gnlProkkaBNHMAMPJ_49 (original name was: gnl|Prokka|BNHMAMPJ_49); gnlProkkaBNHMAMPJ_50 (original name was: gnl|Prokka|BNHMAMPJ_50); gnlProkkaBNHMAMPJ_51 (original name was: gnl|Prokka|BNHMAMPJ_51); gnlProkkaBNHMAMPJ_52 (original name was: gnl|Prokka|BNHMAMPJ_52); gnlProkkaBNHMAMPJ_53 (original name was: gnl|Prokka|BNHMAMPJ_53); gnlProkkaBNHMAMPJ_54 (original name was: gnl|Prokka|BNHMAMPJ_54); gnlProkkaBNHMAMPJ_55 (original name was: gnl|Prokka|BNHMAMPJ_55); gnlProkkaBNHMAMPJ_56 (original name was: gnl|Prokka|BNHMAMPJ_56); gnlProkkaBNHMAMPJ_57 (original name was: gnl|Prokka|BNHMAMPJ_57); gnlProkkaBNHMAMPJ_58 (original name was: gnl|Prokka|BNHMAMPJ_58); gnlProkkaBNHMAMPJ_59 (original name was: gnl|Prokka|BNHMAMPJ_59)

Compact view

gnlProkkaBNHMAMPJ_12 - Region 1 - RiPP-like

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Location: 44,053 - 52,661 nt. (total: 8,609 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBNHMAMPJ_13 - Region 1 - RiPP-like

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Location: 195,841 - 203,901 nt. (total: 8,061 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBNHMAMPJ_35 - Region 1 - RiPP-like

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Location: 45,327 - 68,443 nt. (total: 23,117 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.