GCA_013394955.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKOHOFKGO_3 (original name was: gnl|Prokka|KOHOFKGO_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	lanthipeptide-class-iii	21,050	43,551

gnlProkkaKOHOFKGO_36 (original name was: gnl|Prokka|KOHOFKGO_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	RiPP-like	2,809	13,756

Region	Type	From	To	Most similar known cluster	Similarity
Region 3.1	lanthipeptide-class-iii	21,050	43,551
Region 36.1	RiPP-like	2,809	13,756

No secondary metabolite regions were found in these records:: gnlProkkaKOHOFKGO_1 (original name was: gnl|Prokka|KOHOFKGO_1); gnlProkkaKOHOFKGO_2 (original name was: gnl|Prokka|KOHOFKGO_2); gnlProkkaKOHOFKGO_4 (original name was: gnl|Prokka|KOHOFKGO_4); gnlProkkaKOHOFKGO_5 (original name was: gnl|Prokka|KOHOFKGO_5); gnlProkkaKOHOFKGO_6 (original name was: gnl|Prokka|KOHOFKGO_6); gnlProkkaKOHOFKGO_7 (original name was: gnl|Prokka|KOHOFKGO_7); gnlProkkaKOHOFKGO_8 (original name was: gnl|Prokka|KOHOFKGO_8); gnlProkkaKOHOFKGO_9 (original name was: gnl|Prokka|KOHOFKGO_9); gnlProkkaKOHOFKGO_10 (original name was: gnl|Prokka|KOHOFKGO_10); gnlProkkaKOHOFKGO_11 (original name was: gnl|Prokka|KOHOFKGO_11); gnlProkkaKOHOFKGO_12 (original name was: gnl|Prokka|KOHOFKGO_12); gnlProkkaKOHOFKGO_13 (original name was: gnl|Prokka|KOHOFKGO_13); gnlProkkaKOHOFKGO_14 (original name was: gnl|Prokka|KOHOFKGO_14); gnlProkkaKOHOFKGO_15 (original name was: gnl|Prokka|KOHOFKGO_15); gnlProkkaKOHOFKGO_16 (original name was: gnl|Prokka|KOHOFKGO_16); gnlProkkaKOHOFKGO_17 (original name was: gnl|Prokka|KOHOFKGO_17); gnlProkkaKOHOFKGO_18 (original name was: gnl|Prokka|KOHOFKGO_18); gnlProkkaKOHOFKGO_19 (original name was: gnl|Prokka|KOHOFKGO_19); gnlProkkaKOHOFKGO_20 (original name was: gnl|Prokka|KOHOFKGO_20); gnlProkkaKOHOFKGO_21 (original name was: gnl|Prokka|KOHOFKGO_21); gnlProkkaKOHOFKGO_22 (original name was: gnl|Prokka|KOHOFKGO_22); gnlProkkaKOHOFKGO_23 (original name was: gnl|Prokka|KOHOFKGO_23); gnlProkkaKOHOFKGO_24 (original name was: gnl|Prokka|KOHOFKGO_24); gnlProkkaKOHOFKGO_25 (original name was: gnl|Prokka|KOHOFKGO_25); gnlProkkaKOHOFKGO_26 (original name was: gnl|Prokka|KOHOFKGO_26); gnlProkkaKOHOFKGO_27 (original name was: gnl|Prokka|KOHOFKGO_27); gnlProkkaKOHOFKGO_28 (original name was: gnl|Prokka|KOHOFKGO_28); gnlProkkaKOHOFKGO_29 (original name was: gnl|Prokka|KOHOFKGO_29); gnlProkkaKOHOFKGO_30 (original name was: gnl|Prokka|KOHOFKGO_30); gnlProkkaKOHOFKGO_31 (original name was: gnl|Prokka|KOHOFKGO_31); gnlProkkaKOHOFKGO_32 (original name was: gnl|Prokka|KOHOFKGO_32); gnlProkkaKOHOFKGO_33 (original name was: gnl|Prokka|KOHOFKGO_33); gnlProkkaKOHOFKGO_34 (original name was: gnl|Prokka|KOHOFKGO_34); gnlProkkaKOHOFKGO_35 (original name was: gnl|Prokka|KOHOFKGO_35); gnlProkkaKOHOFKGO_37 (original name was: gnl|Prokka|KOHOFKGO_37); gnlProkkaKOHOFKGO_38 (original name was: gnl|Prokka|KOHOFKGO_38); gnlProkkaKOHOFKGO_39 (original name was: gnl|Prokka|KOHOFKGO_39)

Compact view

gnlProkkaKOHOFKGO_3 - Region 1 - lanthipeptide-class-iii

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Location: 21,050 - 43,551 nt. (total: 22,502 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iii: (micKC and not PKS_KS)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaKOHOFKGO_36 - Region 1 - RiPP-like

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Location: 2,809 - 13,756 nt. (total: 10,948 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.