GCA_013425545.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNGEJFEAC_16 (original name was: gnl|Prokka|NGEJFEAC_16)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	RiPP-like	14,737	32,707

gnlProkkaNGEJFEAC_22 (original name was: gnl|Prokka|NGEJFEAC_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	31,722	72,894

gnlProkkaNGEJFEAC_48 (original name was: gnl|Prokka|NGEJFEAC_48)

Region	Type	From	To	Most similar known cluster		Similarity
Region 48.1	lassopeptide	1	5,059

Region	Type	From	To	Similarity
Region 16.1	RiPP-like	14,737	32,707
Region 22.1	T3PKS	31,722	72,894
Region 48.1	lassopeptide	1	5,059

No secondary metabolite regions were found in these records:: gnlProkkaNGEJFEAC_1 (original name was: gnl|Prokka|NGEJFEAC_1); gnlProkkaNGEJFEAC_2 (original name was: gnl|Prokka|NGEJFEAC_2); gnlProkkaNGEJFEAC_3 (original name was: gnl|Prokka|NGEJFEAC_3); gnlProkkaNGEJFEAC_4 (original name was: gnl|Prokka|NGEJFEAC_4); gnlProkkaNGEJFEAC_5 (original name was: gnl|Prokka|NGEJFEAC_5); gnlProkkaNGEJFEAC_6 (original name was: gnl|Prokka|NGEJFEAC_6); gnlProkkaNGEJFEAC_7 (original name was: gnl|Prokka|NGEJFEAC_7); gnlProkkaNGEJFEAC_8 (original name was: gnl|Prokka|NGEJFEAC_8); gnlProkkaNGEJFEAC_9 (original name was: gnl|Prokka|NGEJFEAC_9); gnlProkkaNGEJFEAC_10 (original name was: gnl|Prokka|NGEJFEAC_10); gnlProkkaNGEJFEAC_11 (original name was: gnl|Prokka|NGEJFEAC_11); gnlProkkaNGEJFEAC_12 (original name was: gnl|Prokka|NGEJFEAC_12); gnlProkkaNGEJFEAC_13 (original name was: gnl|Prokka|NGEJFEAC_13); gnlProkkaNGEJFEAC_14 (original name was: gnl|Prokka|NGEJFEAC_14); gnlProkkaNGEJFEAC_15 (original name was: gnl|Prokka|NGEJFEAC_15); gnlProkkaNGEJFEAC_17 (original name was: gnl|Prokka|NGEJFEAC_17); gnlProkkaNGEJFEAC_18 (original name was: gnl|Prokka|NGEJFEAC_18); gnlProkkaNGEJFEAC_19 (original name was: gnl|Prokka|NGEJFEAC_19); gnlProkkaNGEJFEAC_20 (original name was: gnl|Prokka|NGEJFEAC_20); gnlProkkaNGEJFEAC_21 (original name was: gnl|Prokka|NGEJFEAC_21); gnlProkkaNGEJFEAC_23 (original name was: gnl|Prokka|NGEJFEAC_23); gnlProkkaNGEJFEAC_24 (original name was: gnl|Prokka|NGEJFEAC_24); gnlProkkaNGEJFEAC_25 (original name was: gnl|Prokka|NGEJFEAC_25); gnlProkkaNGEJFEAC_26 (original name was: gnl|Prokka|NGEJFEAC_26); gnlProkkaNGEJFEAC_27 (original name was: gnl|Prokka|NGEJFEAC_27); gnlProkkaNGEJFEAC_28 (original name was: gnl|Prokka|NGEJFEAC_28); gnlProkkaNGEJFEAC_29 (original name was: gnl|Prokka|NGEJFEAC_29); gnlProkkaNGEJFEAC_30 (original name was: gnl|Prokka|NGEJFEAC_30); gnlProkkaNGEJFEAC_31 (original name was: gnl|Prokka|NGEJFEAC_31); gnlProkkaNGEJFEAC_32 (original name was: gnl|Prokka|NGEJFEAC_32); gnlProkkaNGEJFEAC_33 (original name was: gnl|Prokka|NGEJFEAC_33); gnlProkkaNGEJFEAC_34 (original name was: gnl|Prokka|NGEJFEAC_34); gnlProkkaNGEJFEAC_35 (original name was: gnl|Prokka|NGEJFEAC_35); gnlProkkaNGEJFEAC_36 (original name was: gnl|Prokka|NGEJFEAC_36); gnlProkkaNGEJFEAC_37 (original name was: gnl|Prokka|NGEJFEAC_37); gnlProkkaNGEJFEAC_38 (original name was: gnl|Prokka|NGEJFEAC_38); gnlProkkaNGEJFEAC_39 (original name was: gnl|Prokka|NGEJFEAC_39); gnlProkkaNGEJFEAC_40 (original name was: gnl|Prokka|NGEJFEAC_40); gnlProkkaNGEJFEAC_41 (original name was: gnl|Prokka|NGEJFEAC_41); gnlProkkaNGEJFEAC_42 (original name was: gnl|Prokka|NGEJFEAC_42); gnlProkkaNGEJFEAC_43 (original name was: gnl|Prokka|NGEJFEAC_43); gnlProkkaNGEJFEAC_44 (original name was: gnl|Prokka|NGEJFEAC_44); gnlProkkaNGEJFEAC_45 (original name was: gnl|Prokka|NGEJFEAC_45); gnlProkkaNGEJFEAC_46 (original name was: gnl|Prokka|NGEJFEAC_46); gnlProkkaNGEJFEAC_47 (original name was: gnl|Prokka|NGEJFEAC_47); gnlProkkaNGEJFEAC_49 (original name was: gnl|Prokka|NGEJFEAC_49); gnlProkkaNGEJFEAC_50 (original name was: gnl|Prokka|NGEJFEAC_50); gnlProkkaNGEJFEAC_51 (original name was: gnl|Prokka|NGEJFEAC_51); gnlProkkaNGEJFEAC_52 (original name was: gnl|Prokka|NGEJFEAC_52); gnlProkkaNGEJFEAC_53 (original name was: gnl|Prokka|NGEJFEAC_53); gnlProkkaNGEJFEAC_54 (original name was: gnl|Prokka|NGEJFEAC_54); gnlProkkaNGEJFEAC_55 (original name was: gnl|Prokka|NGEJFEAC_55); gnlProkkaNGEJFEAC_56 (original name was: gnl|Prokka|NGEJFEAC_56); gnlProkkaNGEJFEAC_57 (original name was: gnl|Prokka|NGEJFEAC_57); gnlProkkaNGEJFEAC_58 (original name was: gnl|Prokka|NGEJFEAC_58); gnlProkkaNGEJFEAC_59 (original name was: gnl|Prokka|NGEJFEAC_59); gnlProkkaNGEJFEAC_60 (original name was: gnl|Prokka|NGEJFEAC_60); gnlProkkaNGEJFEAC_61 (original name was: gnl|Prokka|NGEJFEAC_61); gnlProkkaNGEJFEAC_62 (original name was: gnl|Prokka|NGEJFEAC_62); gnlProkkaNGEJFEAC_63 (original name was: gnl|Prokka|NGEJFEAC_63); gnlProkkaNGEJFEAC_64 (original name was: gnl|Prokka|NGEJFEAC_64); gnlProkkaNGEJFEAC_65 (original name was: gnl|Prokka|NGEJFEAC_65); gnlProkkaNGEJFEAC_66 (original name was: gnl|Prokka|NGEJFEAC_66); gnlProkkaNGEJFEAC_67 (original name was: gnl|Prokka|NGEJFEAC_67); gnlProkkaNGEJFEAC_68 (original name was: gnl|Prokka|NGEJFEAC_68); gnlProkkaNGEJFEAC_69 (original name was: gnl|Prokka|NGEJFEAC_69); gnlProkkaNGEJFEAC_77 (original name was: gnl|Prokka|NGEJFEAC_77); gnlProkkaNGEJFEAC_82 (original name was: gnl|Prokka|NGEJFEAC_82); gnlProkkaNGEJFEAC_83 (original name was: gnl|Prokka|NGEJFEAC_83)

Compact view

gnlProkkaNGEJFEAC_16 - Region 1 - RiPP-like

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Location: 14,737 - 32,707 nt. (total: 17,971 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNGEJFEAC_22 - Region 1 - T3PKS

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Location: 31,722 - 72,894 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNGEJFEAC_48 - Region 1 - lassopeptide

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Location: 1 - 5,059 nt. (total: 5,059 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lasso peptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.