GCA_013425565.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNDPDGGDB_14 (original name was: gnl|Prokka|NDPDGGDB_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	RiPP-like	14,780	32,749

gnlProkkaNDPDGGDB_22 (original name was: gnl|Prokka|NDPDGGDB_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	31,722	72,894

gnlProkkaNDPDGGDB_36 (original name was: gnl|Prokka|NDPDGGDB_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	lassopeptide	1	5,059

Region	Type	From	To	Similarity
Region 14.1	RiPP-like	14,780	32,749
Region 22.1	T3PKS	31,722	72,894
Region 36.1	lassopeptide	1	5,059

No secondary metabolite regions were found in these records:: gnlProkkaNDPDGGDB_1 (original name was: gnl|Prokka|NDPDGGDB_1); gnlProkkaNDPDGGDB_2 (original name was: gnl|Prokka|NDPDGGDB_2); gnlProkkaNDPDGGDB_3 (original name was: gnl|Prokka|NDPDGGDB_3); gnlProkkaNDPDGGDB_4 (original name was: gnl|Prokka|NDPDGGDB_4); gnlProkkaNDPDGGDB_5 (original name was: gnl|Prokka|NDPDGGDB_5); gnlProkkaNDPDGGDB_6 (original name was: gnl|Prokka|NDPDGGDB_6); gnlProkkaNDPDGGDB_7 (original name was: gnl|Prokka|NDPDGGDB_7); gnlProkkaNDPDGGDB_8 (original name was: gnl|Prokka|NDPDGGDB_8); gnlProkkaNDPDGGDB_9 (original name was: gnl|Prokka|NDPDGGDB_9); gnlProkkaNDPDGGDB_10 (original name was: gnl|Prokka|NDPDGGDB_10); gnlProkkaNDPDGGDB_11 (original name was: gnl|Prokka|NDPDGGDB_11); gnlProkkaNDPDGGDB_12 (original name was: gnl|Prokka|NDPDGGDB_12); gnlProkkaNDPDGGDB_13 (original name was: gnl|Prokka|NDPDGGDB_13); gnlProkkaNDPDGGDB_15 (original name was: gnl|Prokka|NDPDGGDB_15); gnlProkkaNDPDGGDB_16 (original name was: gnl|Prokka|NDPDGGDB_16); gnlProkkaNDPDGGDB_17 (original name was: gnl|Prokka|NDPDGGDB_17); gnlProkkaNDPDGGDB_18 (original name was: gnl|Prokka|NDPDGGDB_18); gnlProkkaNDPDGGDB_19 (original name was: gnl|Prokka|NDPDGGDB_19); gnlProkkaNDPDGGDB_20 (original name was: gnl|Prokka|NDPDGGDB_20); gnlProkkaNDPDGGDB_21 (original name was: gnl|Prokka|NDPDGGDB_21); gnlProkkaNDPDGGDB_23 (original name was: gnl|Prokka|NDPDGGDB_23); gnlProkkaNDPDGGDB_24 (original name was: gnl|Prokka|NDPDGGDB_24); gnlProkkaNDPDGGDB_25 (original name was: gnl|Prokka|NDPDGGDB_25); gnlProkkaNDPDGGDB_26 (original name was: gnl|Prokka|NDPDGGDB_26); gnlProkkaNDPDGGDB_27 (original name was: gnl|Prokka|NDPDGGDB_27); gnlProkkaNDPDGGDB_28 (original name was: gnl|Prokka|NDPDGGDB_28); gnlProkkaNDPDGGDB_29 (original name was: gnl|Prokka|NDPDGGDB_29); gnlProkkaNDPDGGDB_30 (original name was: gnl|Prokka|NDPDGGDB_30); gnlProkkaNDPDGGDB_31 (original name was: gnl|Prokka|NDPDGGDB_31); gnlProkkaNDPDGGDB_32 (original name was: gnl|Prokka|NDPDGGDB_32); gnlProkkaNDPDGGDB_33 (original name was: gnl|Prokka|NDPDGGDB_33); gnlProkkaNDPDGGDB_34 (original name was: gnl|Prokka|NDPDGGDB_34); gnlProkkaNDPDGGDB_35 (original name was: gnl|Prokka|NDPDGGDB_35); gnlProkkaNDPDGGDB_37 (original name was: gnl|Prokka|NDPDGGDB_37); gnlProkkaNDPDGGDB_38 (original name was: gnl|Prokka|NDPDGGDB_38); gnlProkkaNDPDGGDB_39 (original name was: gnl|Prokka|NDPDGGDB_39); gnlProkkaNDPDGGDB_40 (original name was: gnl|Prokka|NDPDGGDB_40); gnlProkkaNDPDGGDB_41 (original name was: gnl|Prokka|NDPDGGDB_41); gnlProkkaNDPDGGDB_42 (original name was: gnl|Prokka|NDPDGGDB_42); gnlProkkaNDPDGGDB_43 (original name was: gnl|Prokka|NDPDGGDB_43); gnlProkkaNDPDGGDB_44 (original name was: gnl|Prokka|NDPDGGDB_44); gnlProkkaNDPDGGDB_45 (original name was: gnl|Prokka|NDPDGGDB_45); gnlProkkaNDPDGGDB_46 (original name was: gnl|Prokka|NDPDGGDB_46); gnlProkkaNDPDGGDB_47 (original name was: gnl|Prokka|NDPDGGDB_47); gnlProkkaNDPDGGDB_48 (original name was: gnl|Prokka|NDPDGGDB_48); gnlProkkaNDPDGGDB_49 (original name was: gnl|Prokka|NDPDGGDB_49); gnlProkkaNDPDGGDB_50 (original name was: gnl|Prokka|NDPDGGDB_50); gnlProkkaNDPDGGDB_51 (original name was: gnl|Prokka|NDPDGGDB_51); gnlProkkaNDPDGGDB_52 (original name was: gnl|Prokka|NDPDGGDB_52); gnlProkkaNDPDGGDB_53 (original name was: gnl|Prokka|NDPDGGDB_53); gnlProkkaNDPDGGDB_54 (original name was: gnl|Prokka|NDPDGGDB_54); gnlProkkaNDPDGGDB_55 (original name was: gnl|Prokka|NDPDGGDB_55); gnlProkkaNDPDGGDB_56 (original name was: gnl|Prokka|NDPDGGDB_56); gnlProkkaNDPDGGDB_57 (original name was: gnl|Prokka|NDPDGGDB_57); gnlProkkaNDPDGGDB_58 (original name was: gnl|Prokka|NDPDGGDB_58); gnlProkkaNDPDGGDB_59 (original name was: gnl|Prokka|NDPDGGDB_59); gnlProkkaNDPDGGDB_66 (original name was: gnl|Prokka|NDPDGGDB_66); gnlProkkaNDPDGGDB_74 (original name was: gnl|Prokka|NDPDGGDB_74); gnlProkkaNDPDGGDB_79 (original name was: gnl|Prokka|NDPDGGDB_79); gnlProkkaNDPDGGDB_80 (original name was: gnl|Prokka|NDPDGGDB_80)

Compact view

gnlProkkaNDPDGGDB_14 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 14,780 - 32,749 nt. (total: 17,970 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNDPDGGDB_22 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 31,722 - 72,894 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNDPDGGDB_36 - Region 1 - lassopeptide

Download region GenBank file

Download region SVG

Location: 1 - 5,059 nt. (total: 5,059 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lasso peptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.