GCA_013425655.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCKLKFFOB_16 (original name was: gnl|Prokka|CKLKFFOB_16)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	RiPP-like	14,780	32,751

gnlProkkaCKLKFFOB_22 (original name was: gnl|Prokka|CKLKFFOB_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	T3PKS	31,720	72,892

gnlProkkaCKLKFFOB_36 (original name was: gnl|Prokka|CKLKFFOB_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	lassopeptide	1	5,059

Region	Type	From	To	Similarity
Region 16.1	RiPP-like	14,780	32,751
Region 22.1	T3PKS	31,720	72,892
Region 36.1	lassopeptide	1	5,059

No secondary metabolite regions were found in these records:: gnlProkkaCKLKFFOB_1 (original name was: gnl|Prokka|CKLKFFOB_1); gnlProkkaCKLKFFOB_2 (original name was: gnl|Prokka|CKLKFFOB_2); gnlProkkaCKLKFFOB_3 (original name was: gnl|Prokka|CKLKFFOB_3); gnlProkkaCKLKFFOB_4 (original name was: gnl|Prokka|CKLKFFOB_4); gnlProkkaCKLKFFOB_5 (original name was: gnl|Prokka|CKLKFFOB_5); gnlProkkaCKLKFFOB_6 (original name was: gnl|Prokka|CKLKFFOB_6); gnlProkkaCKLKFFOB_7 (original name was: gnl|Prokka|CKLKFFOB_7); gnlProkkaCKLKFFOB_8 (original name was: gnl|Prokka|CKLKFFOB_8); gnlProkkaCKLKFFOB_9 (original name was: gnl|Prokka|CKLKFFOB_9); gnlProkkaCKLKFFOB_10 (original name was: gnl|Prokka|CKLKFFOB_10); gnlProkkaCKLKFFOB_11 (original name was: gnl|Prokka|CKLKFFOB_11); gnlProkkaCKLKFFOB_12 (original name was: gnl|Prokka|CKLKFFOB_12); gnlProkkaCKLKFFOB_13 (original name was: gnl|Prokka|CKLKFFOB_13); gnlProkkaCKLKFFOB_14 (original name was: gnl|Prokka|CKLKFFOB_14); gnlProkkaCKLKFFOB_15 (original name was: gnl|Prokka|CKLKFFOB_15); gnlProkkaCKLKFFOB_17 (original name was: gnl|Prokka|CKLKFFOB_17); gnlProkkaCKLKFFOB_18 (original name was: gnl|Prokka|CKLKFFOB_18); gnlProkkaCKLKFFOB_19 (original name was: gnl|Prokka|CKLKFFOB_19); gnlProkkaCKLKFFOB_20 (original name was: gnl|Prokka|CKLKFFOB_20); gnlProkkaCKLKFFOB_21 (original name was: gnl|Prokka|CKLKFFOB_21); gnlProkkaCKLKFFOB_23 (original name was: gnl|Prokka|CKLKFFOB_23); gnlProkkaCKLKFFOB_24 (original name was: gnl|Prokka|CKLKFFOB_24); gnlProkkaCKLKFFOB_25 (original name was: gnl|Prokka|CKLKFFOB_25); gnlProkkaCKLKFFOB_26 (original name was: gnl|Prokka|CKLKFFOB_26); gnlProkkaCKLKFFOB_27 (original name was: gnl|Prokka|CKLKFFOB_27); gnlProkkaCKLKFFOB_28 (original name was: gnl|Prokka|CKLKFFOB_28); gnlProkkaCKLKFFOB_29 (original name was: gnl|Prokka|CKLKFFOB_29); gnlProkkaCKLKFFOB_30 (original name was: gnl|Prokka|CKLKFFOB_30); gnlProkkaCKLKFFOB_31 (original name was: gnl|Prokka|CKLKFFOB_31); gnlProkkaCKLKFFOB_32 (original name was: gnl|Prokka|CKLKFFOB_32); gnlProkkaCKLKFFOB_33 (original name was: gnl|Prokka|CKLKFFOB_33); gnlProkkaCKLKFFOB_34 (original name was: gnl|Prokka|CKLKFFOB_34); gnlProkkaCKLKFFOB_35 (original name was: gnl|Prokka|CKLKFFOB_35); gnlProkkaCKLKFFOB_37 (original name was: gnl|Prokka|CKLKFFOB_37); gnlProkkaCKLKFFOB_38 (original name was: gnl|Prokka|CKLKFFOB_38); gnlProkkaCKLKFFOB_39 (original name was: gnl|Prokka|CKLKFFOB_39); gnlProkkaCKLKFFOB_40 (original name was: gnl|Prokka|CKLKFFOB_40); gnlProkkaCKLKFFOB_41 (original name was: gnl|Prokka|CKLKFFOB_41); gnlProkkaCKLKFFOB_42 (original name was: gnl|Prokka|CKLKFFOB_42); gnlProkkaCKLKFFOB_43 (original name was: gnl|Prokka|CKLKFFOB_43); gnlProkkaCKLKFFOB_44 (original name was: gnl|Prokka|CKLKFFOB_44); gnlProkkaCKLKFFOB_45 (original name was: gnl|Prokka|CKLKFFOB_45); gnlProkkaCKLKFFOB_46 (original name was: gnl|Prokka|CKLKFFOB_46); gnlProkkaCKLKFFOB_47 (original name was: gnl|Prokka|CKLKFFOB_47); gnlProkkaCKLKFFOB_48 (original name was: gnl|Prokka|CKLKFFOB_48); gnlProkkaCKLKFFOB_49 (original name was: gnl|Prokka|CKLKFFOB_49); gnlProkkaCKLKFFOB_50 (original name was: gnl|Prokka|CKLKFFOB_50); gnlProkkaCKLKFFOB_51 (original name was: gnl|Prokka|CKLKFFOB_51); gnlProkkaCKLKFFOB_52 (original name was: gnl|Prokka|CKLKFFOB_52); gnlProkkaCKLKFFOB_53 (original name was: gnl|Prokka|CKLKFFOB_53); gnlProkkaCKLKFFOB_54 (original name was: gnl|Prokka|CKLKFFOB_54); gnlProkkaCKLKFFOB_55 (original name was: gnl|Prokka|CKLKFFOB_55); gnlProkkaCKLKFFOB_56 (original name was: gnl|Prokka|CKLKFFOB_56); gnlProkkaCKLKFFOB_57 (original name was: gnl|Prokka|CKLKFFOB_57); gnlProkkaCKLKFFOB_58 (original name was: gnl|Prokka|CKLKFFOB_58); gnlProkkaCKLKFFOB_59 (original name was: gnl|Prokka|CKLKFFOB_59); gnlProkkaCKLKFFOB_60 (original name was: gnl|Prokka|CKLKFFOB_60); gnlProkkaCKLKFFOB_61 (original name was: gnl|Prokka|CKLKFFOB_61); gnlProkkaCKLKFFOB_62 (original name was: gnl|Prokka|CKLKFFOB_62); gnlProkkaCKLKFFOB_66 (original name was: gnl|Prokka|CKLKFFOB_66); gnlProkkaCKLKFFOB_75 (original name was: gnl|Prokka|CKLKFFOB_75); gnlProkkaCKLKFFOB_76 (original name was: gnl|Prokka|CKLKFFOB_76); gnlProkkaCKLKFFOB_77 (original name was: gnl|Prokka|CKLKFFOB_77)

Compact view

gnlProkkaCKLKFFOB_16 - Region 1 - RiPP-like

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Location: 14,780 - 32,751 nt. (total: 17,972 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCKLKFFOB_22 - Region 1 - T3PKS

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Location: 31,720 - 72,892 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCKLKFFOB_36 - Region 1 - lassopeptide

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Location: 1 - 5,059 nt. (total: 5,059 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lasso peptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.