GCA_014132175.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaHOKMOGFC_2 (original name was: gnl|Prokka|HOKMOGFC_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	T3PKS	130,496	171,665

gnlProkkaHOKMOGFC_5 (original name was: gnl|Prokka|HOKMOGFC_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	cyclic-lactone-autoinducer	193,069	213,774

gnlProkkaHOKMOGFC_12 (original name was: gnl|Prokka|HOKMOGFC_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	42,281	54,431

gnlProkkaHOKMOGFC_16 (original name was: gnl|Prokka|HOKMOGFC_16)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	terpene	49,243	70,124

Region	Type	From	To	Similarity
Region 2.1	T3PKS	130,496	171,665
Region 5.1	cyclic-lactone-autoinducer	193,069	213,774
Region 12.1	RiPP-like	42,281	54,431
Region 16.1	terpene	49,243	70,124

No secondary metabolite regions were found in these records:: gnlProkkaHOKMOGFC_1 (original name was: gnl|Prokka|HOKMOGFC_1); gnlProkkaHOKMOGFC_3 (original name was: gnl|Prokka|HOKMOGFC_3); gnlProkkaHOKMOGFC_4 (original name was: gnl|Prokka|HOKMOGFC_4); gnlProkkaHOKMOGFC_6 (original name was: gnl|Prokka|HOKMOGFC_6); gnlProkkaHOKMOGFC_7 (original name was: gnl|Prokka|HOKMOGFC_7); gnlProkkaHOKMOGFC_8 (original name was: gnl|Prokka|HOKMOGFC_8); gnlProkkaHOKMOGFC_9 (original name was: gnl|Prokka|HOKMOGFC_9); gnlProkkaHOKMOGFC_10 (original name was: gnl|Prokka|HOKMOGFC_10); gnlProkkaHOKMOGFC_11 (original name was: gnl|Prokka|HOKMOGFC_11); gnlProkkaHOKMOGFC_13 (original name was: gnl|Prokka|HOKMOGFC_13); gnlProkkaHOKMOGFC_14 (original name was: gnl|Prokka|HOKMOGFC_14); gnlProkkaHOKMOGFC_15 (original name was: gnl|Prokka|HOKMOGFC_15); gnlProkkaHOKMOGFC_17 (original name was: gnl|Prokka|HOKMOGFC_17); gnlProkkaHOKMOGFC_18 (original name was: gnl|Prokka|HOKMOGFC_18); gnlProkkaHOKMOGFC_19 (original name was: gnl|Prokka|HOKMOGFC_19); gnlProkkaHOKMOGFC_20 (original name was: gnl|Prokka|HOKMOGFC_20); gnlProkkaHOKMOGFC_21 (original name was: gnl|Prokka|HOKMOGFC_21); gnlProkkaHOKMOGFC_22 (original name was: gnl|Prokka|HOKMOGFC_22); gnlProkkaHOKMOGFC_23 (original name was: gnl|Prokka|HOKMOGFC_23); gnlProkkaHOKMOGFC_24 (original name was: gnl|Prokka|HOKMOGFC_24); gnlProkkaHOKMOGFC_25 (original name was: gnl|Prokka|HOKMOGFC_25); gnlProkkaHOKMOGFC_26 (original name was: gnl|Prokka|HOKMOGFC_26); gnlProkkaHOKMOGFC_27 (original name was: gnl|Prokka|HOKMOGFC_27); gnlProkkaHOKMOGFC_28 (original name was: gnl|Prokka|HOKMOGFC_28); gnlProkkaHOKMOGFC_29 (original name was: gnl|Prokka|HOKMOGFC_29); gnlProkkaHOKMOGFC_30 (original name was: gnl|Prokka|HOKMOGFC_30); gnlProkkaHOKMOGFC_31 (original name was: gnl|Prokka|HOKMOGFC_31); gnlProkkaHOKMOGFC_32 (original name was: gnl|Prokka|HOKMOGFC_32); gnlProkkaHOKMOGFC_33 (original name was: gnl|Prokka|HOKMOGFC_33); gnlProkkaHOKMOGFC_34 (original name was: gnl|Prokka|HOKMOGFC_34); gnlProkkaHOKMOGFC_35 (original name was: gnl|Prokka|HOKMOGFC_35); gnlProkkaHOKMOGFC_36 (original name was: gnl|Prokka|HOKMOGFC_36); gnlProkkaHOKMOGFC_37 (original name was: gnl|Prokka|HOKMOGFC_37); gnlProkkaHOKMOGFC_38 (original name was: gnl|Prokka|HOKMOGFC_38); gnlProkkaHOKMOGFC_39 (original name was: gnl|Prokka|HOKMOGFC_39); gnlProkkaHOKMOGFC_40 (original name was: gnl|Prokka|HOKMOGFC_40); gnlProkkaHOKMOGFC_41 (original name was: gnl|Prokka|HOKMOGFC_41); gnlProkkaHOKMOGFC_42 (original name was: gnl|Prokka|HOKMOGFC_42); gnlProkkaHOKMOGFC_43 (original name was: gnl|Prokka|HOKMOGFC_43); gnlProkkaHOKMOGFC_44 (original name was: gnl|Prokka|HOKMOGFC_44); gnlProkkaHOKMOGFC_45 (original name was: gnl|Prokka|HOKMOGFC_45); gnlProkkaHOKMOGFC_46 (original name was: gnl|Prokka|HOKMOGFC_46); gnlProkkaHOKMOGFC_47 (original name was: gnl|Prokka|HOKMOGFC_47); gnlProkkaHOKMOGFC_48 (original name was: gnl|Prokka|HOKMOGFC_48); gnlProkkaHOKMOGFC_49 (original name was: gnl|Prokka|HOKMOGFC_49); gnlProkkaHOKMOGFC_50 (original name was: gnl|Prokka|HOKMOGFC_50); gnlProkkaHOKMOGFC_51 (original name was: gnl|Prokka|HOKMOGFC_51)

Compact view

gnlProkkaHOKMOGFC_2 - Region 1 - T3PKS

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Location: 130,496 - 171,665 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHOKMOGFC_5 - Region 1 - cyclic-lactone-autoinducer

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Location: 193,069 - 213,774 nt. (total: 20,706 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHOKMOGFC_12 - Region 1 - RiPP-like

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Location: 42,281 - 54,431 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaHOKMOGFC_16 - Region 1 - terpene

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Location: 49,243 - 70,124 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.