GCA_015159825.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJOHDHDGE_2 (original name was: gnl|Prokka|JOHDHDGE_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	1,460	20,302

gnlProkkaJOHDHDGE_3 (original name was: gnl|Prokka|JOHDHDGE_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	T3PKS	40,795	62,741

gnlProkkaJOHDHDGE_12 (original name was: gnl|Prokka|JOHDHDGE_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	LAP	1	27,603

gnlProkkaJOHDHDGE_33 (original name was: gnl|Prokka|JOHDHDGE_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	RiPP-like	73,971	86,067	quinolidomicin A	Polyketide	3%

gnlProkkaJOHDHDGE_55 (original name was: gnl|Prokka|JOHDHDGE_55)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	RiPP-like	36,067	46,363

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	RiPP-like	1,460	20,302
Region 3.1	T3PKS	40,795	62,741
Region 12.1	LAP	1	27,603
Region 32.1	RiPP-like	73,971	86,067	quinolidomicin A	Polyketide	3%
Region 34.1	RiPP-like	36,067	46,363

No secondary metabolite regions were found in these records:: gnlProkkaJOHDHDGE_1 (original name was: gnl|Prokka|JOHDHDGE_1); gnlProkkaJOHDHDGE_4 (original name was: gnl|Prokka|JOHDHDGE_4); gnlProkkaJOHDHDGE_5 (original name was: gnl|Prokka|JOHDHDGE_5); gnlProkkaJOHDHDGE_6 (original name was: gnl|Prokka|JOHDHDGE_6); gnlProkkaJOHDHDGE_7 (original name was: gnl|Prokka|JOHDHDGE_7); gnlProkkaJOHDHDGE_8 (original name was: gnl|Prokka|JOHDHDGE_8); gnlProkkaJOHDHDGE_9 (original name was: gnl|Prokka|JOHDHDGE_9); gnlProkkaJOHDHDGE_10 (original name was: gnl|Prokka|JOHDHDGE_10); gnlProkkaJOHDHDGE_11 (original name was: gnl|Prokka|JOHDHDGE_11); gnlProkkaJOHDHDGE_13 (original name was: gnl|Prokka|JOHDHDGE_13); gnlProkkaJOHDHDGE_14 (original name was: gnl|Prokka|JOHDHDGE_14); gnlProkkaJOHDHDGE_15 (original name was: gnl|Prokka|JOHDHDGE_15); gnlProkkaJOHDHDGE_16 (original name was: gnl|Prokka|JOHDHDGE_16); gnlProkkaJOHDHDGE_17 (original name was: gnl|Prokka|JOHDHDGE_17); gnlProkkaJOHDHDGE_18 (original name was: gnl|Prokka|JOHDHDGE_18); gnlProkkaJOHDHDGE_19 (original name was: gnl|Prokka|JOHDHDGE_19); gnlProkkaJOHDHDGE_20 (original name was: gnl|Prokka|JOHDHDGE_20); gnlProkkaJOHDHDGE_21 (original name was: gnl|Prokka|JOHDHDGE_21); gnlProkkaJOHDHDGE_22 (original name was: gnl|Prokka|JOHDHDGE_22); gnlProkkaJOHDHDGE_23 (original name was: gnl|Prokka|JOHDHDGE_23); gnlProkkaJOHDHDGE_24 (original name was: gnl|Prokka|JOHDHDGE_24); gnlProkkaJOHDHDGE_25 (original name was: gnl|Prokka|JOHDHDGE_25); gnlProkkaJOHDHDGE_26 (original name was: gnl|Prokka|JOHDHDGE_26); gnlProkkaJOHDHDGE_27 (original name was: gnl|Prokka|JOHDHDGE_27); gnlProkkaJOHDHDGE_28 (original name was: gnl|Prokka|JOHDHDGE_28); gnlProkkaJOHDHDGE_29 (original name was: gnl|Prokka|JOHDHDGE_29); gnlProkkaJOHDHDGE_30 (original name was: gnl|Prokka|JOHDHDGE_30); gnlProkkaJOHDHDGE_31 (original name was: gnl|Prokka|JOHDHDGE_31); gnlProkkaJOHDHDGE_44 (original name was: gnl|Prokka|JOHDHDGE_44); gnlProkkaJOHDHDGE_66 (original name was: gnl|Prokka|JOHDHDGE_66); gnlProkkaJOHDHDGE_77 (original name was: gnl|Prokka|JOHDHDGE_77); gnlProkkaJOHDHDGE_87 (original name was: gnl|Prokka|JOHDHDGE_87); gnlProkkaJOHDHDGE_88 (original name was: gnl|Prokka|JOHDHDGE_88)

Compact view

gnlProkkaJOHDHDGE_2 - Region 1 - RiPP-like

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Location: 1,460 - 20,302 nt. (total: 18,843 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJOHDHDGE_3 - Region 1 - T3PKS

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Location: 40,795 - 62,741 nt. (total: 21,947 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJOHDHDGE_12 - Region 1 - LAP

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Location: 1 - 27,603 nt. (total: 27,603 nt) Show pHMM detection rules used

Region on contig edge.

LAP: ((((goadsporin_like or PF00881 or TIGR03605) and (YcaO or TIGR03604)) or TIGR03882 or TIGR03603 or TIGR03602) and not cyanobactin_synth)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJOHDHDGE_33 - Region 1 - RiPP-like

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Location: 73,971 - 86,067 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaJOHDHDGE_55 - Region 1 - RiPP-like

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Location: 36,067 - 46,363 nt. (total: 10,297 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.