GCA_015547195.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOOOIFGAO_3 (original name was: gnl|Prokka|OOOIFGAO_3)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	arylpolyene	45,908	93,513	flexirubin	Other	48%

gnlProkkaOOOIFGAO_42 (original name was: gnl|Prokka|OOOIFGAO_42)

Region	Type	From	To	Most similar known cluster		Similarity
Region 42.1	RRE-containing	67,071	77,508

No secondary metabolite regions were found in these records:: gnlProkkaOOOIFGAO_1 (original name was: gnl|Prokka|OOOIFGAO_1); gnlProkkaOOOIFGAO_2 (original name was: gnl|Prokka|OOOIFGAO_2); gnlProkkaOOOIFGAO_4 (original name was: gnl|Prokka|OOOIFGAO_4); gnlProkkaOOOIFGAO_5 (original name was: gnl|Prokka|OOOIFGAO_5); gnlProkkaOOOIFGAO_6 (original name was: gnl|Prokka|OOOIFGAO_6); gnlProkkaOOOIFGAO_7 (original name was: gnl|Prokka|OOOIFGAO_7); gnlProkkaOOOIFGAO_8 (original name was: gnl|Prokka|OOOIFGAO_8); gnlProkkaOOOIFGAO_9 (original name was: gnl|Prokka|OOOIFGAO_9); gnlProkkaOOOIFGAO_10 (original name was: gnl|Prokka|OOOIFGAO_10); gnlProkkaOOOIFGAO_11 (original name was: gnl|Prokka|OOOIFGAO_11); gnlProkkaOOOIFGAO_12 (original name was: gnl|Prokka|OOOIFGAO_12); gnlProkkaOOOIFGAO_13 (original name was: gnl|Prokka|OOOIFGAO_13); gnlProkkaOOOIFGAO_14 (original name was: gnl|Prokka|OOOIFGAO_14); gnlProkkaOOOIFGAO_15 (original name was: gnl|Prokka|OOOIFGAO_15); gnlProkkaOOOIFGAO_16 (original name was: gnl|Prokka|OOOIFGAO_16); gnlProkkaOOOIFGAO_17 (original name was: gnl|Prokka|OOOIFGAO_17); gnlProkkaOOOIFGAO_18 (original name was: gnl|Prokka|OOOIFGAO_18); gnlProkkaOOOIFGAO_19 (original name was: gnl|Prokka|OOOIFGAO_19); gnlProkkaOOOIFGAO_20 (original name was: gnl|Prokka|OOOIFGAO_20); gnlProkkaOOOIFGAO_21 (original name was: gnl|Prokka|OOOIFGAO_21); gnlProkkaOOOIFGAO_22 (original name was: gnl|Prokka|OOOIFGAO_22); gnlProkkaOOOIFGAO_23 (original name was: gnl|Prokka|OOOIFGAO_23); gnlProkkaOOOIFGAO_24 (original name was: gnl|Prokka|OOOIFGAO_24); gnlProkkaOOOIFGAO_25 (original name was: gnl|Prokka|OOOIFGAO_25); gnlProkkaOOOIFGAO_26 (original name was: gnl|Prokka|OOOIFGAO_26); gnlProkkaOOOIFGAO_27 (original name was: gnl|Prokka|OOOIFGAO_27); gnlProkkaOOOIFGAO_28 (original name was: gnl|Prokka|OOOIFGAO_28); gnlProkkaOOOIFGAO_29 (original name was: gnl|Prokka|OOOIFGAO_29); gnlProkkaOOOIFGAO_30 (original name was: gnl|Prokka|OOOIFGAO_30); gnlProkkaOOOIFGAO_31 (original name was: gnl|Prokka|OOOIFGAO_31); gnlProkkaOOOIFGAO_32 (original name was: gnl|Prokka|OOOIFGAO_32); gnlProkkaOOOIFGAO_33 (original name was: gnl|Prokka|OOOIFGAO_33); gnlProkkaOOOIFGAO_34 (original name was: gnl|Prokka|OOOIFGAO_34); gnlProkkaOOOIFGAO_35 (original name was: gnl|Prokka|OOOIFGAO_35); gnlProkkaOOOIFGAO_36 (original name was: gnl|Prokka|OOOIFGAO_36); gnlProkkaOOOIFGAO_37 (original name was: gnl|Prokka|OOOIFGAO_37); gnlProkkaOOOIFGAO_38 (original name was: gnl|Prokka|OOOIFGAO_38); gnlProkkaOOOIFGAO_39 (original name was: gnl|Prokka|OOOIFGAO_39); gnlProkkaOOOIFGAO_40 (original name was: gnl|Prokka|OOOIFGAO_40); gnlProkkaOOOIFGAO_41 (original name was: gnl|Prokka|OOOIFGAO_41); gnlProkkaOOOIFGAO_43 (original name was: gnl|Prokka|OOOIFGAO_43); gnlProkkaOOOIFGAO_44 (original name was: gnl|Prokka|OOOIFGAO_44); gnlProkkaOOOIFGAO_45 (original name was: gnl|Prokka|OOOIFGAO_45); gnlProkkaOOOIFGAO_46 (original name was: gnl|Prokka|OOOIFGAO_46); gnlProkkaOOOIFGAO_47 (original name was: gnl|Prokka|OOOIFGAO_47); gnlProkkaOOOIFGAO_48 (original name was: gnl|Prokka|OOOIFGAO_48); gnlProkkaOOOIFGAO_49 (original name was: gnl|Prokka|OOOIFGAO_49); gnlProkkaOOOIFGAO_50 (original name was: gnl|Prokka|OOOIFGAO_50); gnlProkkaOOOIFGAO_51 (original name was: gnl|Prokka|OOOIFGAO_51); gnlProkkaOOOIFGAO_52 (original name was: gnl|Prokka|OOOIFGAO_52); gnlProkkaOOOIFGAO_53 (original name was: gnl|Prokka|OOOIFGAO_53); gnlProkkaOOOIFGAO_54 (original name was: gnl|Prokka|OOOIFGAO_54); gnlProkkaOOOIFGAO_55 (original name was: gnl|Prokka|OOOIFGAO_55); gnlProkkaOOOIFGAO_56 (original name was: gnl|Prokka|OOOIFGAO_56); gnlProkkaOOOIFGAO_57 (original name was: gnl|Prokka|OOOIFGAO_57); gnlProkkaOOOIFGAO_58 (original name was: gnl|Prokka|OOOIFGAO_58); gnlProkkaOOOIFGAO_59 (original name was: gnl|Prokka|OOOIFGAO_59); gnlProkkaOOOIFGAO_60 (original name was: gnl|Prokka|OOOIFGAO_60); gnlProkkaOOOIFGAO_61 (original name was: gnl|Prokka|OOOIFGAO_61); gnlProkkaOOOIFGAO_62 (original name was: gnl|Prokka|OOOIFGAO_62); gnlProkkaOOOIFGAO_63 (original name was: gnl|Prokka|OOOIFGAO_63); gnlProkkaOOOIFGAO_64 (original name was: gnl|Prokka|OOOIFGAO_64); gnlProkkaOOOIFGAO_65 (original name was: gnl|Prokka|OOOIFGAO_65); gnlProkkaOOOIFGAO_66 (original name was: gnl|Prokka|OOOIFGAO_66); gnlProkkaOOOIFGAO_67 (original name was: gnl|Prokka|OOOIFGAO_67); gnlProkkaOOOIFGAO_68 (original name was: gnl|Prokka|OOOIFGAO_68); gnlProkkaOOOIFGAO_69 (original name was: gnl|Prokka|OOOIFGAO_69); gnlProkkaOOOIFGAO_70 (original name was: gnl|Prokka|OOOIFGAO_70); gnlProkkaOOOIFGAO_71 (original name was: gnl|Prokka|OOOIFGAO_71); gnlProkkaOOOIFGAO_72 (original name was: gnl|Prokka|OOOIFGAO_72); gnlProkkaOOOIFGAO_73 (original name was: gnl|Prokka|OOOIFGAO_73); gnlProkkaOOOIFGAO_74 (original name was: gnl|Prokka|OOOIFGAO_74); gnlProkkaOOOIFGAO_75 (original name was: gnl|Prokka|OOOIFGAO_75); gnlProkkaOOOIFGAO_76 (original name was: gnl|Prokka|OOOIFGAO_76); gnlProkkaOOOIFGAO_77 (original name was: gnl|Prokka|OOOIFGAO_77); gnlProkkaOOOIFGAO_78 (original name was: gnl|Prokka|OOOIFGAO_78); gnlProkkaOOOIFGAO_79 (original name was: gnl|Prokka|OOOIFGAO_79); gnlProkkaOOOIFGAO_80 (original name was: gnl|Prokka|OOOIFGAO_80); gnlProkkaOOOIFGAO_81 (original name was: gnl|Prokka|OOOIFGAO_81); gnlProkkaOOOIFGAO_82 (original name was: gnl|Prokka|OOOIFGAO_82); gnlProkkaOOOIFGAO_83 (original name was: gnl|Prokka|OOOIFGAO_83); gnlProkkaOOOIFGAO_84 (original name was: gnl|Prokka|OOOIFGAO_84); gnlProkkaOOOIFGAO_85 (original name was: gnl|Prokka|OOOIFGAO_85); gnlProkkaOOOIFGAO_86 (original name was: gnl|Prokka|OOOIFGAO_86); gnlProkkaOOOIFGAO_87 (original name was: gnl|Prokka|OOOIFGAO_87); gnlProkkaOOOIFGAO_88 (original name was: gnl|Prokka|OOOIFGAO_88); gnlProkkaOOOIFGAO_89 (original name was: gnl|Prokka|OOOIFGAO_89); gnlProkkaOOOIFGAO_90 (original name was: gnl|Prokka|OOOIFGAO_90); gnlProkkaOOOIFGAO_91 (original name was: gnl|Prokka|OOOIFGAO_91); gnlProkkaOOOIFGAO_92 (original name was: gnl|Prokka|OOOIFGAO_92); gnlProkkaOOOIFGAO_93 (original name was: gnl|Prokka|OOOIFGAO_93); gnlProkkaOOOIFGAO_94 (original name was: gnl|Prokka|OOOIFGAO_94); gnlProkkaOOOIFGAO_95 (original name was: gnl|Prokka|OOOIFGAO_95); gnlProkkaOOOIFGAO_96 (original name was: gnl|Prokka|OOOIFGAO_96); gnlProkkaOOOIFGAO_97 (original name was: gnl|Prokka|OOOIFGAO_97); gnlProkkaOOOIFGAO_98 (original name was: gnl|Prokka|OOOIFGAO_98); gnlProkkaOOOIFGAO_99 (original name was: gnl|Prokka|OOOIFGAO_99); gnlProkkaOOOIFGAO_100 (original name was: gnl|Prokka|OOOIFGAO_100); gnlProkkaOOOIFGAO_101 (original name was: gnl|Prokka|OOOIFGAO_101); gnlProkkaOOOIFGAO_102 (original name was: gnl|Prokka|OOOIFGAO_102); gnlProkkaOOOIFGAO_103 (original name was: gnl|Prokka|OOOIFGAO_103)

Compact view

gnlProkkaOOOIFGAO_3 - Region 1 - arylpolyene

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Location: 45,908 - 93,513 nt. (total: 47,606 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg3_59

AMP-binding (46..308): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaOOOIFGAO_42 - Region 1 - RRE-containing

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Location: 67,071 - 77,508 nt. (total: 10,438 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.