GCA_015554125.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaAOBPIFPD_33 (original name was: gnl|Prokka|AOBPIFPD_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	RRE-containing	26,445	47,232

gnlProkkaAOBPIFPD_44 (original name was: gnl|Prokka|AOBPIFPD_44)

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	RiPP-like	1	8,713
Region 44.2	arylpolyene	185,483	232,994	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 33.1	RRE-containing	26,445	47,232
Region 44.1	RiPP-like	1	8,713
Region 44.2	arylpolyene	185,483	232,994	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaAOBPIFPD_1 (original name was: gnl|Prokka|AOBPIFPD_1); gnlProkkaAOBPIFPD_2 (original name was: gnl|Prokka|AOBPIFPD_2); gnlProkkaAOBPIFPD_3 (original name was: gnl|Prokka|AOBPIFPD_3); gnlProkkaAOBPIFPD_4 (original name was: gnl|Prokka|AOBPIFPD_4); gnlProkkaAOBPIFPD_5 (original name was: gnl|Prokka|AOBPIFPD_5); gnlProkkaAOBPIFPD_6 (original name was: gnl|Prokka|AOBPIFPD_6); gnlProkkaAOBPIFPD_7 (original name was: gnl|Prokka|AOBPIFPD_7); gnlProkkaAOBPIFPD_8 (original name was: gnl|Prokka|AOBPIFPD_8); gnlProkkaAOBPIFPD_9 (original name was: gnl|Prokka|AOBPIFPD_9); gnlProkkaAOBPIFPD_10 (original name was: gnl|Prokka|AOBPIFPD_10); gnlProkkaAOBPIFPD_11 (original name was: gnl|Prokka|AOBPIFPD_11); gnlProkkaAOBPIFPD_12 (original name was: gnl|Prokka|AOBPIFPD_12); gnlProkkaAOBPIFPD_13 (original name was: gnl|Prokka|AOBPIFPD_13); gnlProkkaAOBPIFPD_14 (original name was: gnl|Prokka|AOBPIFPD_14); gnlProkkaAOBPIFPD_15 (original name was: gnl|Prokka|AOBPIFPD_15); gnlProkkaAOBPIFPD_16 (original name was: gnl|Prokka|AOBPIFPD_16); gnlProkkaAOBPIFPD_17 (original name was: gnl|Prokka|AOBPIFPD_17); gnlProkkaAOBPIFPD_18 (original name was: gnl|Prokka|AOBPIFPD_18); gnlProkkaAOBPIFPD_19 (original name was: gnl|Prokka|AOBPIFPD_19); gnlProkkaAOBPIFPD_20 (original name was: gnl|Prokka|AOBPIFPD_20); gnlProkkaAOBPIFPD_21 (original name was: gnl|Prokka|AOBPIFPD_21); gnlProkkaAOBPIFPD_22 (original name was: gnl|Prokka|AOBPIFPD_22); gnlProkkaAOBPIFPD_23 (original name was: gnl|Prokka|AOBPIFPD_23); gnlProkkaAOBPIFPD_24 (original name was: gnl|Prokka|AOBPIFPD_24); gnlProkkaAOBPIFPD_25 (original name was: gnl|Prokka|AOBPIFPD_25); gnlProkkaAOBPIFPD_26 (original name was: gnl|Prokka|AOBPIFPD_26); gnlProkkaAOBPIFPD_27 (original name was: gnl|Prokka|AOBPIFPD_27); gnlProkkaAOBPIFPD_28 (original name was: gnl|Prokka|AOBPIFPD_28); gnlProkkaAOBPIFPD_29 (original name was: gnl|Prokka|AOBPIFPD_29); gnlProkkaAOBPIFPD_30 (original name was: gnl|Prokka|AOBPIFPD_30); gnlProkkaAOBPIFPD_31 (original name was: gnl|Prokka|AOBPIFPD_31); gnlProkkaAOBPIFPD_32 (original name was: gnl|Prokka|AOBPIFPD_32); gnlProkkaAOBPIFPD_34 (original name was: gnl|Prokka|AOBPIFPD_34); gnlProkkaAOBPIFPD_35 (original name was: gnl|Prokka|AOBPIFPD_35); gnlProkkaAOBPIFPD_36 (original name was: gnl|Prokka|AOBPIFPD_36); gnlProkkaAOBPIFPD_37 (original name was: gnl|Prokka|AOBPIFPD_37); gnlProkkaAOBPIFPD_38 (original name was: gnl|Prokka|AOBPIFPD_38); gnlProkkaAOBPIFPD_39 (original name was: gnl|Prokka|AOBPIFPD_39); gnlProkkaAOBPIFPD_40 (original name was: gnl|Prokka|AOBPIFPD_40); gnlProkkaAOBPIFPD_41 (original name was: gnl|Prokka|AOBPIFPD_41); gnlProkkaAOBPIFPD_42 (original name was: gnl|Prokka|AOBPIFPD_42); gnlProkkaAOBPIFPD_43 (original name was: gnl|Prokka|AOBPIFPD_43); gnlProkkaAOBPIFPD_45 (original name was: gnl|Prokka|AOBPIFPD_45); gnlProkkaAOBPIFPD_46 (original name was: gnl|Prokka|AOBPIFPD_46); gnlProkkaAOBPIFPD_47 (original name was: gnl|Prokka|AOBPIFPD_47); gnlProkkaAOBPIFPD_48 (original name was: gnl|Prokka|AOBPIFPD_48); gnlProkkaAOBPIFPD_49 (original name was: gnl|Prokka|AOBPIFPD_49); gnlProkkaAOBPIFPD_50 (original name was: gnl|Prokka|AOBPIFPD_50); gnlProkkaAOBPIFPD_51 (original name was: gnl|Prokka|AOBPIFPD_51); gnlProkkaAOBPIFPD_52 (original name was: gnl|Prokka|AOBPIFPD_52); gnlProkkaAOBPIFPD_53 (original name was: gnl|Prokka|AOBPIFPD_53); gnlProkkaAOBPIFPD_54 (original name was: gnl|Prokka|AOBPIFPD_54); gnlProkkaAOBPIFPD_55 (original name was: gnl|Prokka|AOBPIFPD_55); gnlProkkaAOBPIFPD_56 (original name was: gnl|Prokka|AOBPIFPD_56); gnlProkkaAOBPIFPD_57 (original name was: gnl|Prokka|AOBPIFPD_57); gnlProkkaAOBPIFPD_58 (original name was: gnl|Prokka|AOBPIFPD_58); gnlProkkaAOBPIFPD_59 (original name was: gnl|Prokka|AOBPIFPD_59); gnlProkkaAOBPIFPD_60 (original name was: gnl|Prokka|AOBPIFPD_60); gnlProkkaAOBPIFPD_61 (original name was: gnl|Prokka|AOBPIFPD_61); gnlProkkaAOBPIFPD_62 (original name was: gnl|Prokka|AOBPIFPD_62); gnlProkkaAOBPIFPD_63 (original name was: gnl|Prokka|AOBPIFPD_63); gnlProkkaAOBPIFPD_64 (original name was: gnl|Prokka|AOBPIFPD_64); gnlProkkaAOBPIFPD_65 (original name was: gnl|Prokka|AOBPIFPD_65); gnlProkkaAOBPIFPD_66 (original name was: gnl|Prokka|AOBPIFPD_66); gnlProkkaAOBPIFPD_67 (original name was: gnl|Prokka|AOBPIFPD_67); gnlProkkaAOBPIFPD_68 (original name was: gnl|Prokka|AOBPIFPD_68); gnlProkkaAOBPIFPD_69 (original name was: gnl|Prokka|AOBPIFPD_69); gnlProkkaAOBPIFPD_70 (original name was: gnl|Prokka|AOBPIFPD_70); gnlProkkaAOBPIFPD_71 (original name was: gnl|Prokka|AOBPIFPD_71); gnlProkkaAOBPIFPD_72 (original name was: gnl|Prokka|AOBPIFPD_72); gnlProkkaAOBPIFPD_73 (original name was: gnl|Prokka|AOBPIFPD_73); gnlProkkaAOBPIFPD_74 (original name was: gnl|Prokka|AOBPIFPD_74); gnlProkkaAOBPIFPD_75 (original name was: gnl|Prokka|AOBPIFPD_75); gnlProkkaAOBPIFPD_76 (original name was: gnl|Prokka|AOBPIFPD_76); gnlProkkaAOBPIFPD_77 (original name was: gnl|Prokka|AOBPIFPD_77); gnlProkkaAOBPIFPD_78 (original name was: gnl|Prokka|AOBPIFPD_78); gnlProkkaAOBPIFPD_79 (original name was: gnl|Prokka|AOBPIFPD_79); gnlProkkaAOBPIFPD_80 (original name was: gnl|Prokka|AOBPIFPD_80); gnlProkkaAOBPIFPD_81 (original name was: gnl|Prokka|AOBPIFPD_81)

Compact view

gnlProkkaAOBPIFPD_33 - Region 1 - RRE-containing

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Location: 26,445 - 47,232 nt. (total: 20,788 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAOBPIFPD_44 - Region 1 - RiPP-like

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Location: 1 - 8,713 nt. (total: 8,713 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAOBPIFPD_44 - Region 2 - arylpolyene

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Location: 185,483 - 232,994 nt. (total: 47,512 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg44_132

AMP-binding (55..293): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMVITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)