Select genomic region:
Overview
35.1
52.1
64.1
70.1
81.1
84.1
95.1
100.1
102.1
111.1
112.1
123.1
126.1
127.1
141.1
145.1

### Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJHGIFEFG_35 (original name was: gnl|Prokka|JHGIFEFG_35)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 35.1 | cyclic-lactone-autoinducer | 1 | 1,630 |

gnlProkkaJHGIFEFG_52 (original name was: gnl|Prokka|JHGIFEFG_52)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 52.1 | cyclic-lactone-autoinducer | 1 | 1,127 |

gnlProkkaJHGIFEFG_64 (original name was: gnl|Prokka|JHGIFEFG_64)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 64.1 | ranthipeptide | 54,675 | 76,523 |

gnlProkkaJHGIFEFG_70 (original name was: gnl|Prokka|JHGIFEFG_70)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 70.1 | cyclic-lactone-autoinducer | 54,808 | 75,374 |

gnlProkkaJHGIFEFG_81 (original name was: gnl|Prokka|JHGIFEFG_81)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 81.1 | ranthipeptide,cyclic-lactone-autoinducer | 1 | 28,466 |

gnlProkkaJHGIFEFG_84 (original name was: gnl|Prokka|JHGIFEFG_84)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 84.1 | cyclic-lactone-autoinducer | 1 | 10,400 |

gnlProkkaJHGIFEFG_95 (original name was: gnl|Prokka|JHGIFEFG_95)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 95.1 | cyclic-lactone-autoinducer | 1 | 13,827 |

gnlProkkaJHGIFEFG_100 (original name was: gnl|Prokka|JHGIFEFG_100)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 100.1 | phosphonate | 1 | 14,897 | polysaccharide B | Saccharide | 6%

gnlProkkaJHGIFEFG_102 (original name was: gnl|Prokka|JHGIFEFG_102)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 102.1 | RRE-containing | 137,309 | 157,560 |

gnlProkkaJHGIFEFG_111 (original name was: gnl|Prokka|JHGIFEFG_111)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 111.1 | cyclic-lactone-autoinducer | 1 | 10,213 |

gnlProkkaJHGIFEFG_112 (original name was: gnl|Prokka|JHGIFEFG_112)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 112.1 | phosphonate | 5,425 | 13,883 |

gnlProkkaJHGIFEFG_123 (original name was: gnl|Prokka|JHGIFEFG_123)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 123.1 | ranthipeptide | 1 | 6,914 |

gnlProkkaJHGIFEFG_126 (original name was: gnl|Prokka|JHGIFEFG_126)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 126.1 | cyclic-lactone-autoinducer | 1 | 6,417 |

gnlProkkaJHGIFEFG_127 (original name was: gnl|Prokka|JHGIFEFG_127)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 127.1 | cyclic-lactone-autoinducer | 1 | 6,148 |

gnlProkkaJHGIFEFG_141 (original name was: gnl|Prokka|JHGIFEFG_141)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 141.1 | cyclic-lactone-autoinducer | 1 | 4,141 |

gnlProkkaJHGIFEFG_145 (original name was: gnl|Prokka|JHGIFEFG_145)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 145.1 | cyclic-lactone-autoinducer | 1 | 3,647 |

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 35.1 | cyclic-lactone-autoinducer | 1 | 1,630 |
Region 52.1 | cyclic-lactone-autoinducer | 1 | 1,127 |
Region 64.1 | ranthipeptide | 54,675 | 76,523 |
Region 70.1 | cyclic-lactone-autoinducer | 54,808 | 75,374 |
Region 81.1 | ranthipeptide,cyclic-lactone-autoinducer | 1 | 28,466 |
Region 84.1 | cyclic-lactone-autoinducer | 1 | 10,400 |
Region 95.1 | cyclic-lactone-autoinducer | 1 | 13,827 |
Region 100.1 | phosphonate | 1 | 14,897 | polysaccharide B | Saccharide | 6%
Region 102.1 | RRE-containing | 137,309 | 157,560 |
Region 111.1 | cyclic-lactone-autoinducer | 1 | 10,213 |
Region 112.1 | phosphonate | 5,425 | 13,883 |
Region 123.1 | ranthipeptide | 1 | 6,914 |
Region 126.1 | cyclic-lactone-autoinducer | 1 | 6,417 |
Region 127.1 | cyclic-lactone-autoinducer | 1 | 6,148 |
Region 141.1 | cyclic-lactone-autoinducer | 1 | 4,141 |
Region 145.1 | cyclic-lactone-autoinducer | 1 | 3,647 |

No secondary metabolite regions were found in these records:
  gnlProkkaJHGIFEFG_1 (original name was: gnl|Prokka|JHGIFEFG_1)
  gnlProkkaJHGIFEFG_2 (original name was: gnl|Prokka|JHGIFEFG_2)
  gnlProkkaJHGIFEFG_3 (original name was: gnl|Prokka|JHGIFEFG_3)
  gnlProkkaJHGIFEFG_4 (original name was: gnl|Prokka|JHGIFEFG_4)
  gnlProkkaJHGIFEFG_5 (original name was: gnl|Prokka|JHGIFEFG_5)
  gnlProkkaJHGIFEFG_6 (original name was: gnl|Prokka|JHGIFEFG_6)
  gnlProkkaJHGIFEFG_7 (original name was: gnl|Prokka|JHGIFEFG_7)
  gnlProkkaJHGIFEFG_8 (original name was: gnl|Prokka|JHGIFEFG_8)
  gnlProkkaJHGIFEFG_9 (original name was: gnl|Prokka|JHGIFEFG_9)
  gnlProkkaJHGIFEFG_10 (original name was: gnl|Prokka|JHGIFEFG_10)
  gnlProkkaJHGIFEFG_11 (original name was: gnl|Prokka|JHGIFEFG_11)
  gnlProkkaJHGIFEFG_12 (original name was: gnl|Prokka|JHGIFEFG_12)
  gnlProkkaJHGIFEFG_13 (original name was: gnl|Prokka|JHGIFEFG_13)
  gnlProkkaJHGIFEFG_14 (original name was: gnl|Prokka|JHGIFEFG_14)
  gnlProkkaJHGIFEFG_15 (original name was: gnl|Prokka|JHGIFEFG_15)
  gnlProkkaJHGIFEFG_16 (original name was: gnl|Prokka|JHGIFEFG_16)
  gnlProkkaJHGIFEFG_17 (original name was: gnl|Prokka|JHGIFEFG_17)
  gnlProkkaJHGIFEFG_18 (original name was: gnl|Prokka|JHGIFEFG_18)
  gnlProkkaJHGIFEFG_19 (original name was: gnl|Prokka|JHGIFEFG_19)
  gnlProkkaJHGIFEFG_20 (original name was: gnl|Prokka|JHGIFEFG_20)
  gnlProkkaJHGIFEFG_21 (original name was: gnl|Prokka|JHGIFEFG_21)
  gnlProkkaJHGIFEFG_22 (original name was: gnl|Prokka|JHGIFEFG_22)
  gnlProkkaJHGIFEFG_23 (original name was: gnl|Prokka|JHGIFEFG_23)
  gnlProkkaJHGIFEFG_24 (original name was: gnl|Prokka|JHGIFEFG_24)
  gnlProkkaJHGIFEFG_25 (original name was: gnl|Prokka|JHGIFEFG_25)
  gnlProkkaJHGIFEFG_26 (original name was: gnl|Prokka|JHGIFEFG_26)
  gnlProkkaJHGIFEFG_27 (original name was: gnl|Prokka|JHGIFEFG_27)
  gnlProkkaJHGIFEFG_28 (original name was: gnl|Prokka|JHGIFEFG_28)
  gnlProkkaJHGIFEFG_29 (original name was: gnl|Prokka|JHGIFEFG_29)
  gnlProkkaJHGIFEFG_30 (original name was: gnl|Prokka|JHGIFEFG_30)
  gnlProkkaJHGIFEFG_31 (original name was: gnl|Prokka|JHGIFEFG_31)
  gnlProkkaJHGIFEFG_32 (original name was: gnl|Prokka|JHGIFEFG_32)
  gnlProkkaJHGIFEFG_33 (original name was: gnl|Prokka|JHGIFEFG_33)
  gnlProkkaJHGIFEFG_34 (original name was: gnl|Prokka|JHGIFEFG_34)
  gnlProkkaJHGIFEFG_36 (original name was: gnl|Prokka|JHGIFEFG_36)
  gnlProkkaJHGIFEFG_37 (original name was: gnl|Prokka|JHGIFEFG_37)
  gnlProkkaJHGIFEFG_38 (original name was: gnl|Prokka|JHGIFEFG_38)
  gnlProkkaJHGIFEFG_39 (original name was: gnl|Prokka|JHGIFEFG_39)
  gnlProkkaJHGIFEFG_40 (original name was: gnl|Prokka|JHGIFEFG_40)
  gnlProkkaJHGIFEFG_41 (original name was: gnl|Prokka|JHGIFEFG_41)
  gnlProkkaJHGIFEFG_42 (original name was: gnl|Prokka|JHGIFEFG_42)
  gnlProkkaJHGIFEFG_43 (original name was: gnl|Prokka|JHGIFEFG_43)
  gnlProkkaJHGIFEFG_44 (original name was: gnl|Prokka|JHGIFEFG_44)
  gnlProkkaJHGIFEFG_45 (original name was: gnl|Prokka|JHGIFEFG_45)
  gnlProkkaJHGIFEFG_46 (original name was: gnl|Prokka|JHGIFEFG_46)
  gnlProkkaJHGIFEFG_47 (original name was: gnl|Prokka|JHGIFEFG_47)
  gnlProkkaJHGIFEFG_48 (original name was: gnl|Prokka|JHGIFEFG_48)
  gnlProkkaJHGIFEFG_49 (original name was: gnl|Prokka|JHGIFEFG_49)
  gnlProkkaJHGIFEFG_50 (original name was: gnl|Prokka|JHGIFEFG_50)
  gnlProkkaJHGIFEFG_51 (original name was: gnl|Prokka|JHGIFEFG_51)
  gnlProkkaJHGIFEFG_53 (original name was: gnl|Prokka|JHGIFEFG_53)
  gnlProkkaJHGIFEFG_54 (original name was: gnl|Prokka|JHGIFEFG_54)
  gnlProkkaJHGIFEFG_55 (original name was: gnl|Prokka|JHGIFEFG_55)
  gnlProkkaJHGIFEFG_56 (original name was: gnl|Prokka|JHGIFEFG_56)
  gnlProkkaJHGIFEFG_57 (original name was: gnl|Prokka|JHGIFEFG_57)
  gnlProkkaJHGIFEFG_58 (original name was: gnl|Prokka|JHGIFEFG_58)
  gnlProkkaJHGIFEFG_59 (original name was: gnl|Prokka|JHGIFEFG_59)
  gnlProkkaJHGIFEFG_60 (original name was: gnl|Prokka|JHGIFEFG_60)
  gnlProkkaJHGIFEFG_61 (original name was: gnl|Prokka|JHGIFEFG_61)
  gnlProkkaJHGIFEFG_62 (original name was: gnl|Prokka|JHGIFEFG_62)
  gnlProkkaJHGIFEFG_63 (original name was: gnl|Prokka|JHGIFEFG_63)
  gnlProkkaJHGIFEFG_65 (original name was: gnl|Prokka|JHGIFEFG_65)
  gnlProkkaJHGIFEFG_66 (original name was: gnl|Prokka|JHGIFEFG_66)
  gnlProkkaJHGIFEFG_67 (original name was: gnl|Prokka|JHGIFEFG_67)
  gnlProkkaJHGIFEFG_68 (original name was: gnl|Prokka|JHGIFEFG_68)
  gnlProkkaJHGIFEFG_69 (original name was: gnl|Prokka|JHGIFEFG_69)
  gnlProkkaJHGIFEFG_71 (original name was: gnl|Prokka|JHGIFEFG_71)
  gnlProkkaJHGIFEFG_72 (original name was: gnl|Prokka|JHGIFEFG_72)
  gnlProkkaJHGIFEFG_73 (original name was: gnl|Prokka|JHGIFEFG_73)
  gnlProkkaJHGIFEFG_74 (original name was: gnl|Prokka|JHGIFEFG_74)
  gnlProkkaJHGIFEFG_75 (original name was: gnl|Prokka|JHGIFEFG_75)
  gnlProkkaJHGIFEFG_76 (original name was: gnl|Prokka|JHGIFEFG_76)
  gnlProkkaJHGIFEFG_77 (original name was: gnl|Prokka|JHGIFEFG_77)
  gnlProkkaJHGIFEFG_78 (original name was: gnl|Prokka|JHGIFEFG_78)
  gnlProkkaJHGIFEFG_79 (original name was: gnl|Prokka|JHGIFEFG_79)
  gnlProkkaJHGIFEFG_80 (original name was: gnl|Prokka|JHGIFEFG_80)
  gnlProkkaJHGIFEFG_82 (original name was: gnl|Prokka|JHGIFEFG_82)
  gnlProkkaJHGIFEFG_83 (original name was: gnl|Prokka|JHGIFEFG_83)
  gnlProkkaJHGIFEFG_85 (original name was: gnl|Prokka|JHGIFEFG_85)
  gnlProkkaJHGIFEFG_86 (original name was: gnl|Prokka|JHGIFEFG_86)
  gnlProkkaJHGIFEFG_87 (original name was: gnl|Prokka|JHGIFEFG_87)
  gnlProkkaJHGIFEFG_88 (original name was: gnl|Prokka|JHGIFEFG_88)
  gnlProkkaJHGIFEFG_89 (original name was: gnl|Prokka|JHGIFEFG_89)
  gnlProkkaJHGIFEFG_90 (original name was: gnl|Prokka|JHGIFEFG_90)
  gnlProkkaJHGIFEFG_91 (original name was: gnl|Prokka|JHGIFEFG_91)
  gnlProkkaJHGIFEFG_92 (original name was: gnl|Prokka|JHGIFEFG_92)
  gnlProkkaJHGIFEFG_93 (original name was: gnl|Prokka|JHGIFEFG_93)
  gnlProkkaJHGIFEFG_94 (original name was: gnl|Prokka|JHGIFEFG_94)
  gnlProkkaJHGIFEFG_96 (original name was: gnl|Prokka|JHGIFEFG_96)
  gnlProkkaJHGIFEFG_97 (original name was: gnl|Prokka|JHGIFEFG_97)
  gnlProkkaJHGIFEFG_98 (original name was: gnl|Prokka|JHGIFEFG_98)
  gnlProkkaJHGIFEFG_99 (original name was: gnl|Prokka|JHGIFEFG_99)
  gnlProkkaJHGIFEFG_101 (original name was: gnl|Prokka|JHGIFEFG_101)
  gnlProkkaJHGIFEFG_103 (original name was: gnl|Prokka|JHGIFEFG_103)
  gnlProkkaJHGIFEFG_104 (original name was: gnl|Prokka|JHGIFEFG_104)
  gnlProkkaJHGIFEFG_105 (original name was: gnl|Prokka|JHGIFEFG_105)
  gnlProkkaJHGIFEFG_106 (original name was: gnl|Prokka|JHGIFEFG_106)
  gnlProkkaJHGIFEFG_107 (original name was: gnl|Prokka|JHGIFEFG_107)
  gnlProkkaJHGIFEFG_108 (original name was: gnl|Prokka|JHGIFEFG_108)
  gnlProkkaJHGIFEFG_109 (original name was: gnl|Prokka|JHGIFEFG_109)
  gnlProkkaJHGIFEFG_110 (original name was: gnl|Prokka|JHGIFEFG_110)
  gnlProkkaJHGIFEFG_113 (original name was: gnl|Prokka|JHGIFEFG_113)
  gnlProkkaJHGIFEFG_114 (original name was: gnl|Prokka|JHGIFEFG_114)
  gnlProkkaJHGIFEFG_115 (original name was: gnl|Prokka|JHGIFEFG_115)
  gnlProkkaJHGIFEFG_116 (original name was: gnl|Prokka|JHGIFEFG_116)
  gnlProkkaJHGIFEFG_117 (original name was: gnl|Prokka|JHGIFEFG_117)
  gnlProkkaJHGIFEFG_118 (original name was: gnl|Prokka|JHGIFEFG_118)
  gnlProkkaJHGIFEFG_119 (original name was: gnl|Prokka|JHGIFEFG_119)
  gnlProkkaJHGIFEFG_120 (original name was: gnl|Prokka|JHGIFEFG_120)
  gnlProkkaJHGIFEFG_121 (original name was: gnl|Prokka|JHGIFEFG_121)
  gnlProkkaJHGIFEFG_122 (original name was: gnl|Prokka|JHGIFEFG_122)
  gnlProkkaJHGIFEFG_124 (original name was: gnl|Prokka|JHGIFEFG_124)
  gnlProkkaJHGIFEFG_125 (original name was: gnl|Prokka|JHGIFEFG_125)
  gnlProkkaJHGIFEFG_128 (original name was: gnl|Prokka|JHGIFEFG_128)
  gnlProkkaJHGIFEFG_129 (original name was: gnl|Prokka|JHGIFEFG_129)
  gnlProkkaJHGIFEFG_130 (original name was: gnl|Prokka|JHGIFEFG_130)
  gnlProkkaJHGIFEFG_131 (original name was: gnl|Prokka|JHGIFEFG_131)
  gnlProkkaJHGIFEFG_132 (original name was: gnl|Prokka|JHGIFEFG_132)
  gnlProkkaJHGIFEFG_133 (original name was: gnl|Prokka|JHGIFEFG_133)
  gnlProkkaJHGIFEFG_134 (original name was: gnl|Prokka|JHGIFEFG_134)
  gnlProkkaJHGIFEFG_135 (original name was: gnl|Prokka|JHGIFEFG_135)
  gnlProkkaJHGIFEFG_136 (original name was: gnl|Prokka|JHGIFEFG_136)
  gnlProkkaJHGIFEFG_137 (original name was: gnl|Prokka|JHGIFEFG_137)
  gnlProkkaJHGIFEFG_138 (original name was: gnl|Prokka|JHGIFEFG_138)
  gnlProkkaJHGIFEFG_139 (original name was: gnl|Prokka|JHGIFEFG_139)
  gnlProkkaJHGIFEFG_140 (original name was: gnl|Prokka|JHGIFEFG_140)
  gnlProkkaJHGIFEFG_142 (original name was: gnl|Prokka|JHGIFEFG_142)
  gnlProkkaJHGIFEFG_143 (original name was: gnl|Prokka|JHGIFEFG_143)
  gnlProkkaJHGIFEFG_144 (original name was: gnl|Prokka|JHGIFEFG_144)
  gnlProkkaJHGIFEFG_146 (original name was: gnl|Prokka|JHGIFEFG_146)
  gnlProkkaJHGIFEFG_147 (original name was: gnl|Prokka|JHGIFEFG_147)
  gnlProkkaJHGIFEFG_148 (original name was: gnl|Prokka|JHGIFEFG_148)
  gnlProkkaJHGIFEFG_149 (original name was: gnl|Prokka|JHGIFEFG_149)
  gnlProkkaJHGIFEFG_150 (original name was: gnl|Prokka|JHGIFEFG_150)
  gnlProkkaJHGIFEFG_151 (original name was: gnl|Prokka|JHGIFEFG_151)
  gnlProkkaJHGIFEFG_152 (original name was: gnl|Prokka|JHGIFEFG_152)
  gnlProkkaJHGIFEFG_153 (original name was: gnl|Prokka|JHGIFEFG_153)
  gnlProkkaJHGIFEFG_154 (original name was: gnl|Prokka|JHGIFEFG_154)
  gnlProkkaJHGIFEFG_155 (original name was: gnl|Prokka|JHGIFEFG_155)
  gnlProkkaJHGIFEFG_156 (original name was: gnl|Prokka|JHGIFEFG_156)
  gnlProkkaJHGIFEFG_157 (original name was: gnl|Prokka|JHGIFEFG_157)

Compact view
gnlProkkaJHGIFEFG_35 - Region 1 - cyclic-lactone-autoinducer
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 1,630 nt. (total: 1,630 nt) Show pHMM detection rules used
Region on contig edge.
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_52 - Region 1 - cyclic-lactone-autoinducer
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 1,127 nt. (total: 1,127 nt) Show pHMM detection rules used
Region on contig edge.
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_64 - Region 1 - ranthipeptide
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 54,675 - 76,523 nt. (total: 21,849 nt) Show pHMM detection rules used
ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_70 - Region 1 - cyclic-lactone-autoinducer
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 54,808 - 75,374 nt. (total: 20,567 nt) Show pHMM detection rules used
Region on contig edge.
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_81 - Region 1 - cyclic-lactone-autoinducer,ranthipeptide
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 28,466 nt. (total: 28,466 nt) Show pHMM detection rules used
Region on contig edge.
ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_84 - Region 1 - cyclic-lactone-autoinducer
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 10,400 nt. (total: 10,400 nt) Show pHMM detection rules used
Region on contig edge.
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_95 - Region 1 - cyclic-lactone-autoinducer
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 13,827 nt. (total: 13,827 nt) Show pHMM detection rules used
Region on contig edge.
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_100 - Region 1 - phosphonate
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 14,897 nt. (total: 14,897 nt) Show pHMM detection rules used
Region on contig edge.
phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
gnlProkkaJHGIFEFG_102 - Region 1 - RRE-containing
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 137,309 - 157,560 nt. (total: 20,252 nt) Show pHMM detection rules used
RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_111 - Region 1 - cyclic-lactone-autoinducer
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 10,213 nt. (total: 10,213 nt) Show pHMM detection rules used
Region on contig edge.
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_112 - Region 1 - phosphonate
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 5,425 - 13,883 nt. (total: 8,459 nt) Show pHMM detection rules used
Region on contig edge.
phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_123 - Region 1 - ranthipeptide
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 6,914 nt. (total: 6,914 nt) Show pHMM detection rules used
Region on contig edge.
ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_126 - Region 1 - cyclic-lactone-autoinducer
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 6,417 nt. (total: 6,417 nt) Show pHMM detection rules used
Region on contig edge.
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_127 - Region 1 - cyclic-lactone-autoinducer
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 6,148 nt. (total: 6,148 nt) Show pHMM detection rules used
Region on contig edge.
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_141 - Region 1 - cyclic-lactone-autoinducer
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 4,141 nt. (total: 4,141 nt) Show pHMM detection rules used
Region on contig edge.
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaJHGIFEFG_145 - Region 1 - cyclic-lactone-autoinducer
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 3,647 nt. (total: 3,647 nt) Show pHMM detection rules used
Region on contig edge.
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.