GCA_015708055.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEFMGHHJC_53 (original name was: gnl|Prokka|EFMGHHJC_53)

Region	Type	From	To	Most similar known cluster		Similarity
Region 47.1	RiPP-like	22,662	33,597

gnlProkkaEFMGHHJC_72 (original name was: gnl|Prokka|EFMGHHJC_72)

Region	Type	From	To	Most similar known cluster		Similarity
Region 66.1	RiPP-like	17,503	29,668

gnlProkkaEFMGHHJC_73 (original name was: gnl|Prokka|EFMGHHJC_73)

Region	Type	From	To	Most similar known cluster		Similarity
Region 67.1	RiPP-like	12,017	25,874	gassericin T	RiPP	44%

Region	Type	From	To	Most similar known cluster	Similarity
Region 47.1	RiPP-like	22,662	33,597
Region 66.1	RiPP-like	17,503	29,668
Region 67.1	RiPP-like	12,017	25,874	gassericin T	RiPP	44%

No secondary metabolite regions were found in these records:: gnlProkkaEFMGHHJC_1 (original name was: gnl|Prokka|EFMGHHJC_1); gnlProkkaEFMGHHJC_2 (original name was: gnl|Prokka|EFMGHHJC_2); gnlProkkaEFMGHHJC_3 (original name was: gnl|Prokka|EFMGHHJC_3); gnlProkkaEFMGHHJC_5 (original name was: gnl|Prokka|EFMGHHJC_5); gnlProkkaEFMGHHJC_6 (original name was: gnl|Prokka|EFMGHHJC_6); gnlProkkaEFMGHHJC_8 (original name was: gnl|Prokka|EFMGHHJC_8); gnlProkkaEFMGHHJC_9 (original name was: gnl|Prokka|EFMGHHJC_9); gnlProkkaEFMGHHJC_10 (original name was: gnl|Prokka|EFMGHHJC_10); gnlProkkaEFMGHHJC_11 (original name was: gnl|Prokka|EFMGHHJC_11); gnlProkkaEFMGHHJC_12 (original name was: gnl|Prokka|EFMGHHJC_12); gnlProkkaEFMGHHJC_13 (original name was: gnl|Prokka|EFMGHHJC_13); gnlProkkaEFMGHHJC_15 (original name was: gnl|Prokka|EFMGHHJC_15); gnlProkkaEFMGHHJC_16 (original name was: gnl|Prokka|EFMGHHJC_16); gnlProkkaEFMGHHJC_17 (original name was: gnl|Prokka|EFMGHHJC_17); gnlProkkaEFMGHHJC_18 (original name was: gnl|Prokka|EFMGHHJC_18); gnlProkkaEFMGHHJC_19 (original name was: gnl|Prokka|EFMGHHJC_19); gnlProkkaEFMGHHJC_20 (original name was: gnl|Prokka|EFMGHHJC_20); gnlProkkaEFMGHHJC_22 (original name was: gnl|Prokka|EFMGHHJC_22); gnlProkkaEFMGHHJC_23 (original name was: gnl|Prokka|EFMGHHJC_23); gnlProkkaEFMGHHJC_24 (original name was: gnl|Prokka|EFMGHHJC_24); gnlProkkaEFMGHHJC_25 (original name was: gnl|Prokka|EFMGHHJC_25); gnlProkkaEFMGHHJC_26 (original name was: gnl|Prokka|EFMGHHJC_26); gnlProkkaEFMGHHJC_27 (original name was: gnl|Prokka|EFMGHHJC_27); gnlProkkaEFMGHHJC_29 (original name was: gnl|Prokka|EFMGHHJC_29); gnlProkkaEFMGHHJC_30 (original name was: gnl|Prokka|EFMGHHJC_30); gnlProkkaEFMGHHJC_31 (original name was: gnl|Prokka|EFMGHHJC_31); gnlProkkaEFMGHHJC_32 (original name was: gnl|Prokka|EFMGHHJC_32); gnlProkkaEFMGHHJC_33 (original name was: gnl|Prokka|EFMGHHJC_33); gnlProkkaEFMGHHJC_34 (original name was: gnl|Prokka|EFMGHHJC_34); gnlProkkaEFMGHHJC_35 (original name was: gnl|Prokka|EFMGHHJC_35); gnlProkkaEFMGHHJC_36 (original name was: gnl|Prokka|EFMGHHJC_36); gnlProkkaEFMGHHJC_37 (original name was: gnl|Prokka|EFMGHHJC_37); gnlProkkaEFMGHHJC_39 (original name was: gnl|Prokka|EFMGHHJC_39); gnlProkkaEFMGHHJC_40 (original name was: gnl|Prokka|EFMGHHJC_40); gnlProkkaEFMGHHJC_41 (original name was: gnl|Prokka|EFMGHHJC_41); gnlProkkaEFMGHHJC_42 (original name was: gnl|Prokka|EFMGHHJC_42); gnlProkkaEFMGHHJC_43 (original name was: gnl|Prokka|EFMGHHJC_43); gnlProkkaEFMGHHJC_44 (original name was: gnl|Prokka|EFMGHHJC_44); gnlProkkaEFMGHHJC_45 (original name was: gnl|Prokka|EFMGHHJC_45); gnlProkkaEFMGHHJC_46 (original name was: gnl|Prokka|EFMGHHJC_46); gnlProkkaEFMGHHJC_47 (original name was: gnl|Prokka|EFMGHHJC_47); gnlProkkaEFMGHHJC_48 (original name was: gnl|Prokka|EFMGHHJC_48); gnlProkkaEFMGHHJC_49 (original name was: gnl|Prokka|EFMGHHJC_49); gnlProkkaEFMGHHJC_50 (original name was: gnl|Prokka|EFMGHHJC_50); gnlProkkaEFMGHHJC_51 (original name was: gnl|Prokka|EFMGHHJC_51); gnlProkkaEFMGHHJC_52 (original name was: gnl|Prokka|EFMGHHJC_52); gnlProkkaEFMGHHJC_54 (original name was: gnl|Prokka|EFMGHHJC_54); gnlProkkaEFMGHHJC_55 (original name was: gnl|Prokka|EFMGHHJC_55); gnlProkkaEFMGHHJC_56 (original name was: gnl|Prokka|EFMGHHJC_56); gnlProkkaEFMGHHJC_57 (original name was: gnl|Prokka|EFMGHHJC_57); gnlProkkaEFMGHHJC_58 (original name was: gnl|Prokka|EFMGHHJC_58); gnlProkkaEFMGHHJC_59 (original name was: gnl|Prokka|EFMGHHJC_59); gnlProkkaEFMGHHJC_60 (original name was: gnl|Prokka|EFMGHHJC_60); gnlProkkaEFMGHHJC_61 (original name was: gnl|Prokka|EFMGHHJC_61); gnlProkkaEFMGHHJC_62 (original name was: gnl|Prokka|EFMGHHJC_62); gnlProkkaEFMGHHJC_63 (original name was: gnl|Prokka|EFMGHHJC_63); gnlProkkaEFMGHHJC_64 (original name was: gnl|Prokka|EFMGHHJC_64); gnlProkkaEFMGHHJC_65 (original name was: gnl|Prokka|EFMGHHJC_65); gnlProkkaEFMGHHJC_66 (original name was: gnl|Prokka|EFMGHHJC_66); gnlProkkaEFMGHHJC_67 (original name was: gnl|Prokka|EFMGHHJC_67); gnlProkkaEFMGHHJC_68 (original name was: gnl|Prokka|EFMGHHJC_68); gnlProkkaEFMGHHJC_69 (original name was: gnl|Prokka|EFMGHHJC_69); gnlProkkaEFMGHHJC_70 (original name was: gnl|Prokka|EFMGHHJC_70); gnlProkkaEFMGHHJC_71 (original name was: gnl|Prokka|EFMGHHJC_71); gnlProkkaEFMGHHJC_74 (original name was: gnl|Prokka|EFMGHHJC_74); gnlProkkaEFMGHHJC_75 (original name was: gnl|Prokka|EFMGHHJC_75); gnlProkkaEFMGHHJC_76 (original name was: gnl|Prokka|EFMGHHJC_76); gnlProkkaEFMGHHJC_77 (original name was: gnl|Prokka|EFMGHHJC_77); gnlProkkaEFMGHHJC_78 (original name was: gnl|Prokka|EFMGHHJC_78); gnlProkkaEFMGHHJC_79 (original name was: gnl|Prokka|EFMGHHJC_79)

Compact view

gnlProkkaEFMGHHJC_53 - Region 1 - RiPP-like

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Location: 22,662 - 33,597 nt. (total: 10,936 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEFMGHHJC_72 - Region 1 - RiPP-like

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Location: 17,503 - 29,668 nt. (total: 12,166 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEFMGHHJC_73 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 12,017 - 25,874 nt. (total: 13,858 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1